Details from NCBI annotation

Gene Symbol Hcfc1
Gene Name host cell factor C1 (VP16-accessory protein), transcript variant X2
Entrez Gene ID 101697902

Database interlinks

Part of NW_004624946.1 (Scaffold)

For more information consult the page for NW_004624946.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 6135 bp    Location: 590247..573653   Strand: -
>XM_004874976.1
ATGGCCTCGGCCGTGCCGCCCGCCAGCTCGCCGGCCGTGCTCCTGCAGCCCCGCTGGAAGCGGGTGGTGGGCTGGTCGGGCCCCGTGCCCCGGCCCCGTCACGGCCACCGCGCCGTGGCCATCAAGGAGCTCATCGTGGTGTTCGGCGGAGGCAACGAGGGGATCGTGGACGAGCTGCACGTGTACAACACGGCGACCAACCAGTGGTTCATCCCGGCTGTGAGAGGGGACATCCCTCCCGGCTGCGCGGCCTATGGCTTTGTCTGCGACGGCACCCGCCTGCTGGTGTTCGGCGGGATGGTGGAGTACGGGAAGTACAGCAATGACCTCTACGAGCTCCAGGCAAGTCGTTGGGAGTGGAAGAGACTCAAAGCAAAGACACCCAAAAATGGGCCCCCTCCATGTCCTCGGCTCGGGCATAGCTTCTCCCTTGTGGGCAACAAATGCTACCTGTTTGGGGGTCTGGCCAATGATAGCGAGGACCCCAAGAACAACATTCCGAGATATCTGAATGACTTATACATCCTGGAACTACGGCCTGGCTCTGGAGTGGTGGCCTGGGACATCCCTATCACTTACGGGGTCCTGCCCCCACCCCGAGAGTCACATACTGCTGTGGTCTACACGGAGAGGGACAACAAGAAGTCCAAGCTGGTGATCTATGGAGGGATGAGTGGCTGCAGGCTGGGAGACCTCTGGACCCTTGACATTGAGACACTGACATGGAACAAGCCCAGTCTCAGTGGCGTGGCCCCGCTTCCTCGTAGTCTCCACTCTGCGACCACCATAGGAAACAAAATGTACGTGTTTGGTGGCTGGGTGCCCCTAGTCATGGACGATGTCAAAGTGGCCACGCATGAGAAGGAGTGGAAGTGTACCAACACCCTGGCTTGTCTCAACCTGGACACCATGGCCTGGGAGACCATCCTGATGGACACGCTGGAGGACAATATTCCGCGCGCTCGAGCCGGCCACTGTGCCGTTGCCATCAACACCCGCCTGTACATTTGGAGTGGGCGTGACGGCTACCGCAAGGCCTGGAACAACCAGGTCTGCTGCAAGGACCTCTGGTACCTGGAGACAGAAAAGCCTCCCTCCCCGGCCCGGGTCCAGCTGGTACGCGCCAATACCAACTCCCTGGAGGTGAGCTGGGGGGCGGTGGCAACAGCCGACAGTTACCTTCTGCAGCTCCAGAAATACGACATTCCTGCCACGGCTGCTACTGCCGCCTCCCCCACACCCAACCCGGTCCCATCTGTGCCTGCCAACCCTCCCAAGAGCCCTGCCCCTGCAGCAGCCGCACCTGCCGTGCAGCCGCTGACCCAAGTAGGCATCACGCTCCTGCCCCAGGCTGCCTCGGCGCCGCCCACCACCACAACCATCCAGGTCTTGCCTACAGTGCCGGGCAGCTCCATCGCCGTGCCCACTGCAGCCAGGACTCAGGGTGTCCCTGCTGTTCTCAAAGTGGCCGGTCCGCAGGCTACTGCAGGAACCCCACTGGTTACCATGCGACCTGCTAGCCAGGCTGGGAAAGCCCCCGTCACTGTGACTTCCCTGCCTGCGGGTGTGCGAATGGTTGTGCCCACACAGAGTGCTCAGGGGACGGTGATTGGCAGTAACCCACAGATGAGCGGGATGGCCGCGCTGGCAGCTGCTGCTGCTGCAACCCAGAAGATTCCTCCTTCCTCGGCACCTACCGTCCTGAGTGTCCCGGCAGGCACCACCATTGTGAAGACCGTGGCTGTGACGCCTGGCACCTCCACTCTCCCTGCCACCGTGAAGGTGGCCTCTTCGCCTGTCATGGTGAGCAACCCAGCTACTCGCATGCTGAAGACTGCGGCCGCCCAAGTGGGGACATCTGTCTCCTCTGCTGCCAACACGTCTACCCGCCCTATCATCACGGTGCACAAATCGGGGACCGTGACAGTGGCCCAGCAAGCTCAGGTGGTGACCACGGTGGTGGGTGGTGTCACTAAGACCATCACCCTGGTGAAGAGTCCCATCTCTGTCCCCGGAGGCAGCGCTCTGATTTCCAATCTGGGCAAAGTGATGTCCGTGGTCCAGACCAAGCCAGTTCAGACTTCGGCAGTCACAGGCCAGGCCTCTACCGGCCCAGTGACTCAGATCATCCAGACCAAAGGGCCCCTGCCAGCGGGGACAATCCTGAAGCTGGTAACCTCGGCAGATGGCAAGCCCACCACCATCATCACCACTACACAGGCCAGTGGGGCGGGAACCAAGCCTACCATCCTGGGCATCAGCAGTGTCTCCCCCAGCACCACCAAGCCTGGCACGACCACCATCATCAAGACCATCCCCATGTCAGCCATCATCACCCAGGCGGGGGCCACAGGTGTGACCAGCACTCCTGGCATTAAGTCCCCCATCACCATCATCACCACCAAGGTTATGACTTCGGGAACCGGAGCACCTGCCAAAATCATCACTGCTGTCCCCAAGATTGCCACTGGCCACGGGCAGCAGGGAGTGACTCAGGTGGTGCTAAAGGGGGCCCCTGGACAGCCAGGCACCATCCTCCGCACTGTGCCCATGGGAGGCGTTCGCCTGGTCACCCCTGTCACTGTCTCTGCTGTCAAGCCAGCTGTCACCACGTTGGTTGTGAAGGGCACCACAGGGGTCACCACGCTGGGCACAGTAACAGGCACTGTATCCACCAGCCTTGCTGGAGCCGGGGGCCACAGCACCAGCGCCTCCCTGGCCACACCCATCACCACCTTGGGCACCATTGCTACCCTCTCAAGCCAGGTGATCAATCCCACTGCCATCACTGTATCAGCTGCACAGACCACGCTGACGGCGGCTGGCGGGCTCACCACACCCACCATCACCATGCAGCCTGTCTCCCAGCCTACCCAGGTGACCCTGATCACAGCTCCCAGTGGGGTCGAGGCCCAGCCTGTGCATGACCTTCCCGTGTCCATTCTGGCCTCGCCTACCACGGAGCAGCCCACGGCCACAGTCACCATCGCCGACTCGGGCCAGGGCGATGTGCAGCCTGGCACCGTGACGCTGGTGTGCTCCAACCCGCCCTGCGAGACCCATGAGACGGGCACCACCAACACCGCCACCACCACTGTCGTGGCTAACCTTGGGGGACACACCCAGCCCACCCAAGTGCAGTTTGTCTGCGACAGGCAGGAGGCCGCTGCTTCTCTCGTGACCTCGACTGTGGGGCAGCAGAATGGCAGCGTGGTCCGTGTCTGCTCCAACCCGCCCTGTGAGACCCACGAGACGGGCACCACCAGCACCGCCACCACGGCCACCTCCAACATGGCTGGGCAGCATGGCTGCTCGAACCCGCCCTGTGAGACCCACGAGACCGGCACCACCAGCACCGCCACCACGGCCATGTCCAGCATCGGTGCTGGCCAGCAGCGTGATGCCCGCCGTGCCTCAGGCGCCCCCACTGTGGTCCGCATCAGTGTGGCTCCTGGGGTGCTGGAGGGGGCCCAGGGCTCCATCAAGCCCCAGTGCCAAACTCGCCAGACCAGCGCCACCAGCACCACCATGACTGTGATGGTCACTGGCACCCCGTGCGCCTCCGTGCAGTTGGCCCCGCTGAGTGGCAAGGACGTACCCTTGGGGCGCCAACTGGAGATGCTGCACCATGCCCACACAGCCGGCACCCAGAGTGGGGAGCCCAGCGCGGCTCGGGGGATGCCTGCGCCTGCGTATGAGGCCCTCCAGGCTGCCTCGCCCGGCGCCACCGTGACTGTGACTGCCCTGGAGGCGTTGCTGTGCCCCTCGGCCACCGTGACCCAGGTCTGCTCCAACCCGCCGTGCGAGACCCACGAGACGGGCACCACCCACACCGCCACTACCTCCAACGCAGGCAGCGCCCAGCGGGTGTGCTCCAACCCGCCGTGCGAGACCCATGAGACGGGCACCACCCACACGGCCACCACCGCCACCTCCCACGGGGCAGCGGGCCAGCCCGAGGGGGGGCAGCAGCCCCCTGCCGGCCGCCCCTGCGAGACGCACCAGACCACTTCCACAGGTACCACCATGTCTGTCAGTGTGGGCGCCCTGCTGCCTGACGCCGGCCCTGCCCACAGGACCCTGGAGCCTGGCGCGGTGCCCCCCACCCCTGGCCAGGCTGGGGCCGCGCTGCTGGCCCCCTTCCCGACGCAGAGGGTGTGCTCCAACCCACCCTGTGAGACTCACGAGACAGGCACCACGCATACGGCCACCACTGTCACCTCGAACATGAGCTCCAACCAAGACCCCCCACCAGCCGCTGGTGATCAGGGAGAGGTGGAGAGCACCCAGGGCGACAGCGTGAACATCACCAGCTCCAGCACCATCACGACGACTGTGTCCTCCACGCTGCCACGGGCGGTGACCACTGTGACCCAGTCCACGCCTGTCCCAGGCCCCTCAGTGCCGCCCCCTGAGGAACTGCAGGTCTCCCCTGGGCCCCGCCAGCAGCTGCCGCCACGACAGCTCCTGCAGTCCACCTCTGCGCCCCTCATGGGGGAGCCGGCTGAGGTCCTGGCCGCTGCCCCGCCCGCAGAGCTCCAGGCCGCTGTGGACCTGAGCAACACGGGGGACCCGTCTTCGGGCCAGGAGCCCACTGGCTCTGCCGTGGTGGCCACCGTGGTGGTGCAGCCCCCCCAGCCAACACAGTCTGAAGTAGAACAGTTGTCGCTTCCCCAGGAGCTCATGGCCGAGGCCCAGGCGGGCACCACCACCCTGATGGTCACAGGCCTCACACCCGAGGAGCTGGCTGTGACTGCCGCCGCCGAGGCAGCTGCCCAGGCTGCAGCCACCGAGGAAGCTCAGGCCCTGGCCATCCAGGCTGTGCTGCAGGCTGCACAGCAGGCCGTCATGGGTACCGGGGAGCCCATGGACACGTCCGAGGCGGCAGCGGCCGTGACCCAGGCAGAACTGGGTCACCTTTCTGCTGAGGGCCAGGAGGGCCAGGCCACCACCATCCCCATTGTGCTGACGCAGCAGGAGCTGGCAGCCCTGGTCCAGCAGCAGCAGCAGCTGCAGGAGGCGCAGGCCCAGGCCCAGCAGCAGCAGCACCACCTCCCTACCGAGGCACTGGCCCCAGCTGACAGCCTCAATGACCCGGCCATCGAGGGCAACTGCCTCAATGAACTGGCGGGCGCTGTGCCCAGCACCGTGGCCCTGCTGCCCCCCACAGCCACTGAGAGTGAGCAAGGGCTGCCCTGGGGCAGGGAGGGCCGCAAGGGCTCCTGGGTCTTGAGCCTCCCCAATCACATCCCATTTTTCCCAGGCCTGGCTCCATCCAACACATTCGTGGCTCCCCAGCCAGTTGTGGTCGCCAGCCCGGCCAAGCTGCAAGCTGCAGCTACCCTGACCGAAGTGGCCAATGGCATCGAGTCCCTGGGTGTGAAGCCAGACTTGCCGCCTCCACCCAGCAAGGCCCCTGTGAAGAAAGAGAACCAGTGGTTTGATGTGGGGGTCATTAAAGGCACCAATGTAATGGTGACACACTATTTCCTGCCACCAGATGACGCTGTCCCCTTGGATGACGATTTGGGCGCCGTCCCTGATTACAGCCAGCTGAAGAAGCAGGAGCTGCAGCCAGGCACAGCCTATAAGTTCCGAGTTGCCGGCATCAACGCCTGCGGCCGGGGGCCCTTCAGTGAGATCTCCGCTTTTAAGACATGTCTGCCGGGTTTCCCGGGGGCCCCTTGTGCCATTAAAATCAGCAAAGTGAGTCTTGCCATGGGGTGGGCCCATGCCCGTGCAGGTGGGGGGCCCAGGAGGCTCCCAGGGCAGAGGCAGTCGCCTGGCGGGTGGTATCCAGGGCACAGGGAGGGCCTCCGCCCAGCCTCAGTCTCCTCTGCAGCATGCTGGCTGTTGCCCTGTGCCGTTCAGTGTGCTCTGCCCTTGGCCCAGAGACATCCCCGGGGGTCAGGGTTCCTTGTGAGCTCCGTGCTTGAGTGCAGAAGCACGGGACAGGTCCCATCTGGGCGGAGGGGCATGGGGTGGGGGGCGGCCTTGAGGCTTCACTCAGGGCAGGTCACCATGAGCCGGGACAGGCTGGGAGGGCCAAGGCCACGGACAGCCAAGCGCACCTCCGTCCCTCACGCTCGCAGAGTCCCGACGGTGCTCACCTCACATGGGAGCCGCCCTCCGTGA

Related Sequences

XP_004875033.1 Protein

Hcfc1 PREDICTED: host cell factor 1 isoform X2 [Heterocephalus glaber]

Length: 2044 aa     
>XP_004875033.1
MASAVPPASSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTERDNKKSKLVIYGGMSGCRLGDLWTLDIETLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLETEKPPSPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATAASPTPNPVPSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAASAPPTTTTIQVLPTVPGSSIAVPTAARTQGVPAVLKVAGPQATAGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSNPQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTSTLPATVKVASSPVMVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQAGATGVTSTPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGHSTSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQVTLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCETHETGTTNTATTTVVANLGGHTQPTQVQFVCDRQEAAASLVTSTVGQQNGSVVRVCSNPPCETHETGTTSTATTATSNMAGQHGCSNPPCETHETGTTSTATTAMSSIGAGQQRDARRASGAPTVVRISVAPGVLEGAQGSIKPQCQTRQTSATSTTMTVMVTGTPCASVQLAPLSGKDVPLGRQLEMLHHAHTAGTQSGEPSAARGMPAPAYEALQAASPGATVTVTALEALLCPSATVTQVCSNPPCETHETGTTHTATTSNAGSAQRVCSNPPCETHETGTTHTATTATSHGAAGQPEGGQQPPAGRPCETHQTTSTGTTMSVSVGALLPDAGPAHRTLEPGAVPPTPGQAGAALLAPFPTQRVCSNPPCETHETGTTHTATTVTSNMSSNQDPPPAAGDQGEVESTQGDSVNITSSSTITTTVSSTLPRAVTTVTQSTPVPGPSVPPPEELQVSPGPRQQLPPRQLLQSTSAPLMGEPAEVLAAAPPAELQAAVDLSNTGDPSSGQEPTGSAVVATVVVQPPQPTQSEVEQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMGTGEPMDTSEAAAAVTQAELGHLSAEGQEGQATTIPIVLTQQELAALVQQQQQLQEAQAQAQQQQHHLPTEALAPADSLNDPAIEGNCLNELAGAVPSTVALLPPTATESEQGLPWGREGRKGSWVLSLPNHIPFFPGLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVKPDLPPPPSKAPVKKENQWFDVGVIKGTNVMVTHYFLPPDDAVPLDDDLGAVPDYSQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKVSLAMGWAHARAGGGPRRLPGQRQSPGGWYPGHREGLRPASVSSAACWLLPCAVQCALPLAQRHPRGSGFLVSSVLECRSTGQVPSGRRGMGWGAALRLHSGQVTMSRDRLGGPRPRTAKRTSVPHARRVPTVLTSHGSRPP