Details from NCBI annotation

Gene Symbol Slc6a11
Gene Name solute carrier family 6 (neurotransmitter transporter, GABA), member 11, transcript variant X2
Entrez Gene ID 101716874

Database interlinks

Part of NW_004624943.1 (Scaffold)

For more information consult the page for NW_004624943.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC6A11 ENSCPOG00000007809 (Guinea pig)

Gene Details

solute carrier family 6 (neurotransmitter transporter), member 11

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007033, Guinea pig)

Protein Percentage 97.99%
CDS Percentage 94.33%
Ka/Ks Ratio 0.03057 (Ka = 0.0088, Ks = 0.287)

SLC6A11 ENSG00000132164 (Human)

Gene Details

solute carrier family 6 (neurotransmitter transporter), member 11

External Links

Gene Match (Ensembl Protein ID: ENSP00000254488, Human)

Protein Percentage 92.79%
CDS Percentage 89.32%
Ka/Ks Ratio 0.06156 (Ka = 0.0349, Ks = 0.5669)

Slc6a11 ENSMUSG00000030307 (Mouse)

Gene Details

solute carrier family 6 (neurotransmitter transporter, GABA), member 11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032451, Mouse)

Protein Percentage 93.91%
CDS Percentage 88.14%
Ka/Ks Ratio 0.03803 (Ka = 0.029, Ks = 0.7638)

Slc6a11 ENSRNOG00000005697 (Rat)

Gene Details

solute carrier family 6 (neurotransmitter transporter), member 11 (Slc6a11), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008342, Rat)

Protein Percentage 94.07%
CDS Percentage 88.03%
Ka/Ks Ratio 0.03501 (Ka = 0.0281, Ks = 0.8031)

Genome Location

Sequence Coding sequence

Length: 1875 bp    Location: 803978..694447   Strand: -
>XM_004874851.1
ATGACGGCGGAGAAGGCGCTGCCCCTGGGCGACGCGAAGGCGGCCGAGGAGGCGCGGGAGACCCAGGCGCTCGGCGGCGGCGGGGACGAGCGGGACCACACGCGAGACAAGGCGGTCCACGAGCGCGGCCACTGGAACAACAAGGTGGAGTTCGTGCTGAGCGTGGCCGGGGAGATCATCGGGCTGGGCAACGTGTGGCGCTTCCCCTACCTGTGCTACAAGAACGGCGGAGGGGCATTCCTGATTCCCTATGTGGTATTTTTTATTTGCTGTGGAATTCCAGTTTTTTTCCTGGAAACAGCTCTGGGGCAATTCACAAGTGAAGGTGGCATTACTTGTTGGAGGAAAGTCTGCCCTTTATTTGAAGGCATTGGCTACGCAACGCAAGTGATCGAGGCCCATCTGAATGTGTATTACATCATCATCCTGGCCTGGGCCATCTTCTACCTGAGCAACTGCTTTACCACCGAGCTCCCCTGGGCCACGTGTGGGCACGAATGGAACACAGAGAAATGTGTGGAGTTCCAGAAGCTGAACGCGAGCAACTACAGCCATGTGTCCCTGCAGAACGCCACCTCCCCGGTCATGGAGTTTTGGGAGCGCCACGTGCTGGCCATCTCCGACGGGATCGAGCACATTGGGAGCCTCCGCTGGGAGCTGGCCTTGTGTCTCCTGGCAGCCTGGACCATCTGCTACTTCTGCATCTGGAAGGGCACCAAGTCAACAGGAAAGGTTGTGTATGTCACTGCGACCTTCCCCTATGTCATGCTTCTCATCCTTCTGATCCGAGGGATCACTTTGCCGGGGGCTGCTGAAGGCATCAAGTTCTACCTGTACCCTGACATCTCCCGGCTCTCTGACCCACAGGTGTGGGTGGATGCCGGGACCCAGATCTTCTTCTCCTATGCCATCTGCCTGGGCTGCCTGACTGCCCTGGGGAGCTACAACAACTACAACAACAACTGCTACAGGGACTGCATCATGCTCTGTTGCCTGAACAGCGGCACCAGCTTCGTGGCCGGCTTTGCCATCTTCTCGGTCTTGGGCTTCATGGCTTATGAGCAGGGCGTGCCCATCGCCGAGGTGGCCGAGTCTGGCCCTGGCCTGGCCTTCATCGCCTACCCCAAGGCCGTCACCATGATGCCTCTGTCCCCGCTGTGGGCAACCCTGTTCTTCATGATGCTCATCTTCCTGGGTCTGGACAGCCAGTTTGTGTGCGTGGAAAGCCTGGTGACAGCCGTGGTGGACATGTACCCCAAGGTCTTCCGGAGGGGCTACCGGCGGGAGCTGCTCATCCTGGCGCTGTCTGTGGTCTCCTTCTTCCTGGGCCTCGTGATGCTGACGGAGGGTGGCATGTACATCTTCCAGCTCTTCGACTCCTATGCCGCCAGCGGGATGTGCCTGCTCTTTGTGGCCATCTTTGAGTGCGTGTGTATCGGCTGGGTGTATGGAAGCAACCGGTTCTATGACAACATTGAAGACATGATTGGCTACCAGCCACTGTCACTCATTAAGTGGTGCTGGAAGGTGGTGACCCCTGGGATCTGTGCGGGCATCTTCATCTTCTTCCTTGTCAAGTATAAGCCACTCAAGTACAACAATGTCTACACCTACCCTGCCTGGGGCTATGGCATCGGCTGGCTCATGGCACTGTCCTCCATGCTGTGCATTCCACTCTGGATCTGCATTCAGCTGTGGCGGATGGAAGGCACGCTCCCCGAGAAATTCCGGAAGTTGACAATCCCCAGTGCAGATCTGAAAATGCGGGGCAAGCTTGGGGCAGGCCCATGGACGGTGACAGTTAATGACTGTGACGCCAAGCTCAAGGGTGACGGCAGCATCGCAGCCATCACAGAGAAGGAGACGCACTTCTGA

Related Sequences

XP_004874908.1 Protein

Slc6a11 PREDICTED: sodium- and chloride-dependent GABA transporter 3 isoform X2 [Heterocephalus glaber]

Length: 624 aa      View alignments
>XP_004874908.1
MTAEKALPLGDAKAAEEARETQALGGGGDERDHTRDKAVHERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTEKCVEFQKLNASNYSHVSLQNATSPVMEFWERHVLAISDGIEHIGSLRWELALCLLAAWTICYFCIWKGTKSTGKVVYVTATFPYVMLLILLIRGITLPGAAEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYRRELLILALSVVSFFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRFYDNIEDMIGYQPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVYTYPAWGYGIGWLMALSSMLCIPLWICIQLWRMEGTLPEKFRKLTIPSADLKMRGKLGAGPWTVTVNDCDAKLKGDGSIAAITEKETHF