Sequence details NCBI ID: XM_004874593.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Exosc3
Gene Name exosome component 3, transcript variant X3
Entrez Gene ID 101707251

Database interlinks

Part of NW_004624930.1 (Scaffold)

For more information consult the page for NW_004624930.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EXOSC3 ENSCPOG00000008634 (Guinea pig)

Gene Details

exosome component 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007756, Guinea pig)

Protein Percentage 95.24%
CDS Percentage 93.16%
Ka/Ks Ratio 0.14621 (Ka = 0.0286, Ks = 0.1959)

EXOSC3 ENSG00000107371 (Human)

Gene Details

exosome component 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000323046, Human)

Protein Percentage 91.97%
CDS Percentage 89.05%
Ka/Ks Ratio 0.11137 (Ka = 0.0413, Ks = 0.3712)

Exosc3 ENSMUSG00000028322 (Mouse)

Gene Details

exosome component 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030003, Mouse)

Protein Percentage 88.64%
CDS Percentage 85.23%
Ka/Ks Ratio 0.12793 (Ka = 0.0671, Ks = 0.5244)

Exosc3 ENSRNOG00000012409 (Rat)

Gene Details

exosome component 3 (Exosc3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016582, Rat)

Protein Percentage 86.54%
CDS Percentage 83.97%
Ka/Ks Ratio 0.17403 (Ka = 0.0877, Ks = 0.5039)

Genome Location

Sequence Coding sequence

Length: 825 bp    Location: 1401844..1393091   Strand: -
Raw sequence   
>XM_004874593.1
ATGGCTGAACCTGTGCTTGTTGCCGAATCTCTGGCGGGCTGCAGGGCGCGGGCGGCGCGCACTGTGCTAGGTCAGGTGGTGCTCCCAGGTGAGGAGTTGCTGCTGCCTGACCAAGAGGAAACAGACGGCCCTGGCGTTGCAGGGGAGCGACCCTTGCGCCTGAATGCTGGGATGTGCCCGCGATTGCGCGTAGTGTGCGGCCCTGGCTTACGGCGCTGCGGAGACCGTCTGCTGGTAACCAAGTGTGGCCGCTTTCGTCACAAGGAGTCTGGCAGTGGCAGCAGTGGTGGCATTTACTGGGTGGACTCGCAACAGAAGCGGTATGTACCAGTGAAAGGAGACCATGTGATTGGCATAGTGACAGCCAAATCTGGAGATATATTCAAAGTTGATGTTGGAGGGAGTGAGCCAGCCTCTTTGTCTTACTTGGCATTTGAAGGTGCAACTAAAAGAAACAGACCAAATGTGCAGGTTGGAGATCTCATCTATGGCCAGTTTGTGGTTGCTAATAAAGATATGGAACCAGAGATGGTCTGTATTGACAGCTGTGGAAGAGCCAATGGAATGGGTGTAATTGGTCAGGATGGCCTTCTCTTTAAAGTGACTTTAGGCTTGATTAGAAAGCTATTGGCACCAGATTGTGAAATTATACAGGAAGTGGGAAAACTCTATCCACTAGAGATTGTATTTGGCATGAATGGAAGAATATGGGTTAAGGCAAAAACCATTCAGCAGACTTTAATTTTGGCCAACATTTTAGAAGCTTGTGAACACATGACAGCAGACCAAAGAAAGCAAATCTTTGCAAGACTGGCAGAAAGTTGA

Related Sequences

XP_004874650.1 Protein

Exosc3 PREDICTED: exosome complex component RRP40 isoform X3 [Heterocephalus glaber]

Length: 274 aa      View alignments
>XP_004874650.1
MAEPVLVAESLAGCRARAARTVLGQVVLPGEELLLPDQEETDGPGVAGERPLRLNAGMCPRLRVVCGPGLRRCGDRLLVTKCGRFRHKESGSGSSGGIYWVDSQQKRYVPVKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEIIQEVGKLYPLEIVFGMNGRIWVKAKTIQQTLILANILEACEHMTADQRKQIFARLAES