Sequence details NCBI ID: XM_004874585.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Frmpd1
Gene Name FERM and PDZ domain containing 1
Entrez Gene ID 101705567

Database interlinks

Part of NW_004624930.1 (Scaffold)

For more information consult the page for NW_004624930.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FRMPD1 ENSCPOG00000008617 (Guinea pig)

Gene Details

FERM and PDZ domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007743, Guinea pig)

Protein Percentage 87.88%
CDS Percentage 90.09%
Ka/Ks Ratio 0.29433 (Ka = 0.0666, Ks = 0.2263)

FRMPD1 ENSG00000070601 (Human)

Gene Details

FERM and PDZ domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000444411, Human)

Protein Percentage 82.25%
CDS Percentage 86.57%
Ka/Ks Ratio 0.34355 (Ka = 0.1024, Ks = 0.2982)

Frmpd1 ENSMUSG00000035615 (Mouse)

Gene Details

FERM and PDZ domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103434, Mouse)

Protein Percentage 77.17%
CDS Percentage 80.98%
Ka/Ks Ratio 0.27135 (Ka = 0.1421, Ks = 0.5236)

Frmpd1 ENSRNOG00000012546 (Rat)

Gene Details

Protein Frmpd1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016839, Rat)

Protein Percentage 76.16%
CDS Percentage 80.19%
Ka/Ks Ratio 0.27336 (Ka = 0.1505, Ks = 0.5505)

Genome Location

Sequence Coding sequence

Length: 4698 bp    Location: 1268783..1363501   Strand: +
Raw sequence   
>XM_004874585.1
ATGGAAGAGCTGGAGACCAGTTTATTCCAGACTCGGAAAGCACACAGAATAGAACAAATGGTGGCAAGATGGCTTCGGCGCTCCCGGGACAGCTCTGCCCGGGCTAAAGTCGCTGCAGCTGATGGGCCTCCTGGGAACCCAACCCAGGCCCCCACCCCTGTGAGGCACACGGTAAAGATAGACAAAGACGCCCTCCTCCAGGACTATGGATTTCACATTTCTGAGAGCCTTCCTCTTACAGTGGTAGCCGTCACAGCAGGAGGCTCTGCTCATGGCAAGCTTTTTCCTGGTGATCAGATCCTTCAAATGAACAATGAGCCTGCTGAAGACCTTTCCTGTGAACGAGCAGTCGATATTTTGAGGGAAGCTGAAGATTCTCTTTCCGTCACAGTTGTTCGCTGCGCATCGGGAGTCCCCAAGTCGTCCTTCTTGACTGACGAGAAGAGGGCCAGGCTGAAGATCAACCCTGTGAAGGTACACTTTGCTGAGGAAGTACTGGTCAGTGGACACACCCAGGGTAATTCTCTGCTGTGCATGCCCAACGTGCTCAAGCTGTACTTGGAGAATGGACAGACCAAAGCTTTCAAGTTTGAGGAAAACACAACAGTGAAGGACATCATCCTCACAGTGAAAGAGAAGCTGTCCATCTGCAGTATCGAGTACTTTGGACTGGCCCTGGAAGAGCAGTACAGTATCTCCCGGCTGCACCTGCTGCATGAGGAAGAGCTCATCCAGCAGGTGGTGGAAAGGGAGGAGTCACATGACTCCCGTTGCCTCTTTAGGGTGTGTTTTGTCCCCAAGGACCCCCTGGACCTCCTGAAAGAAGACCCTGTGGCTTTTGAATACCTCTACCTGCAGAGCTGCAGTGACGTGCTTCAGGAGCGCTTTGCTGTGGAAATGAAATGCAGCTCTGCACTCCGGCTTGCAGCCCTACATATCCAGGAGCGGATCTATGCATGTGCCCAGCCACAGAAAATCTCTTTGAAATACATAGAGAAGGACTGGGGAATAGAGAATTTTATATCTCCAACTTTACTCCGAAACATGAAAGGCAAAGATATCAAGAAAGCCATTAGTTTCCACATGAAGAGGAACCAAAACTTGTTGGAACCCCGACAGAAGCAACTTATTTCTGCTGCTCAGCTACGTTTAAATTATCTACAAATCCTTGGAGAACTAAAGACATTTGGTGGGAAAATCTTTAATGCTACTCTGATGTTACAGGATAGAGAATCTTGCATTGCCCTTCTAGTTGGAGCCAAGTATGGAATTAGCCAAATTATCAATAGCAAACTCAACATCATGTCCACATTGGCAGAGTTTGCCAACATCAGCCGTGTAGAGCTGACAGAAGAGTCTGAGAAAGTGAGCATGGTCAAAGTGTATCTTCAGGACATTAAGGTTCTAACATTGCTGCTGGAATCCAACAGTGCAAAAGACCTAGCCTGCCTGATTGCTGGGTACTACAGGCTGTTTGTCAACCCAGTTATCTCCATTTTCCTCTGGCCTGGAAGTAGACAAGTACACCGGGTGTCTGCTGAAGAAGGCTATGAGTCCAGGGCCTGCAGTGACTCAGAAGAGTCTTCTGAAGTGGACTGTGTGCTGGAACCTCTCTGTAATAGACGTCTGATGAAGGTGGGCCCCTGTAGACCACTCATCAAAGAGGAGCTGTCCCCCAGAAACAGCCTCACACCTGAGATGGCCAGGAGGGGTCCGAGCACCTCTGGGGCCAGCAGCACAACAGACAGTGCTGAGTCTGAGGCATCTGACTCAGCCAACACTGAGAGCCGAGGCTGCAGGACCAGCGGCTCAAGTGAGTCCATGGATGCTCTCGAAGAAGATGACTTAGATGCCTGCTCCTCCAGCAGGTCTGGCTTCTTCCACTTCAGCTCGTCTGGCTTCTCAGAGGGTCTTGATTCCAACAGCCAAGAGGAGAAAGACAGGATTGAGACCAGTGGCTTCCTCTGTCTCCTGGACCTGGCCCAGAGGGCCAACCCTCAGTGCCAGAAGACACAGTATTCCCAGAGTTCTGCTCCCGAAACCTGCAGCTGGGGAGCAGAACTGACCGTGGGTAGGCTGGACCCCAGGCTGTATGAGGACAGGCAGACTGATTATTACAGCCTGTGCTCCAGTGTCTCCCCAGCCAGCCACCTGAGCGACAGTTCAGAGAGCACAGCTTCCCGGCAGGGGCGTGTGCCAGCAGTCTGGGGCCAGCAGGGCTGGATTGAGGCCCAGCCCAGCTCCACGCTGGAAGGCCTGGCCCTGCACCTGCCACTGGACTTTGAGGATGGCAGCTCCGATGAGGAATACTATGATGCGGCTGACAAGCTCACATCCCCACACACCCTCTCAGGGCCCAGAGCCATTTCTGCCACAGAATCCATTGCCACAGGCTTGCAGAGTCAGGCCAGTGCTTGCACCCCTGAGGAGAGCCTGCATCCTGGGCCATGTGGAAGAGGGCCAAGCAGAAGGGGAGGGGTGAAGAAGTATGCCAAGACCCTTCGGAAAAGAAGGTCTTTCCTGCAGACTGACTATACCTCTCAGGTTTCCTTTCCCCTGGTGCCATCAGCCTCCCTGGAGAGCATGGACGATGTGTGCTACTATGACAGGAAGCCTTACCTGAGCATCAGCACCACCTCCCCAACTGTGTCCTCCTTGCAGGACATGCAAGGTGAGCCAGGCCTCCTGGAGACCAAGGCTCTGGGGTTGCTGGCTCCACTGAGGGAGACCAAGAACAAAAATCCAGCCTCCAGGGTCATGGAGATGGAGCCCGAGACCATGGAAACCAAGTCAGTCATCGATTCTCGGGTGTCTTCTATCTCTGCCATTCGCCTCCGGATTGACCCCAACAATAAAGAAAATTCTGAGGTTCCCCATTTGGCCACCACTGCTCATAGTCCCTCAACAAGCAGCCTTCACTGCCCCAACCTGGCTTCTTCTGGTCCAGAGAGTGCTCAGACAAAACCTTTCCAAATCACATCTCCACTTCAAGAACCAGATGTCACTGCCCCCAAAGAACTCACCATAGATCTTAGCAACAGCGCCTTCCCTCTCTCCAGTGCTGATCCTAACTCAGACAAACCAGAGCCACATAATGTCTCTCAAGAAGACAAACTGGAGCTGGGAGACATCCAATTGGAAGTAGGATTGGGATCTTTTTTGACAAATCATATACAAGAAACTGGCTCCCAATACACAGAGCCTTTGTTGTCCCCTGGAAATGGACCTAGAAGTGATGAATGTGAAATGAATTCAGGAGAGATGGCTTCTATTCCTACAGAGGAGGAGCGACAAGGACAGCTATCTTTGGAAAGTGACAGCAAAGTTGCAAACAAACATAGCCCCAACTTATTTCAGGAAGAATCTGGGAAGGATTCAGGTGACTCAGAGGGTGATGTGGCAAATGCTGTTCCACAGGCTCCCAATGGTGTGACTCCAGCTAGTGAAATAATTACCTTCTTTCCCTTGAAGGCTCCTGGAGCAGGGGCTGAGCAGACCCTACCACATCCCCCCAGGAACCCCGAAGGAGAAGCCCTAGTCCAAGCTTGCCAGACCCAAGAACAAAATCTATTGGCAGAGTTGGATCTAGACTCCAATTTCTTGCTTGGGGAGCAGACCATTCCATCTGACTTCCCTCTAGTGGGGATCAAGGCAGAGCCACTTAACCATGTCATAGGGGATGATACAACCCCTACAGACCTCCCTCAGCAGGTCTATTTTAATCCTTCCCTGCCAAAGCCACCACTATGTCAAGAGGAGCCAGACTTAGAAGCTTCAAACCATTGCTCACTGTCAGAAAGCAAAGATGACAGTTCTAGCATTTGCCTCTCTACTGAGAAGTCTTTCCTTTGCCTTGCCCCAGAAAGCCACCCTCAAGTTTCTGCCCATCTCAGGAGGGCAGTGTCTTTGGGTTTTGCAGGGTTGAATGAGGTGGTGGCCCCCGGGATTGGGATGGAGCAGTGCAGCTGCCAGTTCGCCTATGCCACGTGCTTCCGTGGCCTGCAGCCTGAGACAGAGGAAGAAGACAGAGACCTGAAAGCATTCTCTCCTGTCCCACTAACCTCTCCACCCTCTGCAGGAAGCTGTCTTGCTCTACCTTGGATGCCTGCCCGGGCCAACAGCTGCAGCACGGCATCCCTGTCAAGGAAAAGCCACATCTGGCCAGAGTACTGCTCCAGAGCACTGAGACAGCTGAAAGCCACCCCTGCTGGCACCCCTGAGGGATTCATCCATCTCCTGGAGAGTTTGCTGGAACTTCAAGACATTCTAGAAGCTTCCTGGGGGGGTGGACACAAACATCCCCCAGAGAAGTGCACCTGGCACTTTTTGGAAAGCCGGAGCCGGCTCTGCATGGGCTCACAGAAGCTCCTGTCAAGCTGTCAGCATGTGATTAGAACAGACCAGTCCCCCGAGGAGATGCAGGGTGCCGTGCGTGACACCTTCCAGCACCTGATCCAGCTGGCTGGCCTGTGCTTTCAGTTCACTGACTGCAGCCGCTGCTCTGCCCGACACAGGGAAGCAGCTGGGAACCTAAGGGATGTGGTGTGCACCTACCACCAGTTTGTAGAGGCCGCAAAATTGACCTGTGAGAGAGGCTACCACGACCTGAGTGTGAAACTCTTGGCCCGTCAGTGCACAGCCCTCACAGCTGCCGTGTTCTGTTTGACCCAGAAGTTCCGGGCATCTACTGCCCTGTAA

Related Sequences

XP_004874642.1 Protein

Frmpd1 PREDICTED: FERM and PDZ domain-containing protein 1 [Heterocephalus glaber]

Length: 1565 aa      View alignments
>XP_004874642.1
MEELETSLFQTRKAHRIEQMVARWLRRSRDSSARAKVAAADGPPGNPTQAPTPVRHTVKIDKDALLQDYGFHISESLPLTVVAVTAGGSAHGKLFPGDQILQMNNEPAEDLSCERAVDILREAEDSLSVTVVRCASGVPKSSFLTDEKRARLKINPVKVHFAEEVLVSGHTQGNSLLCMPNVLKLYLENGQTKAFKFEENTTVKDIILTVKEKLSICSIEYFGLALEEQYSISRLHLLHEEELIQQVVEREESHDSRCLFRVCFVPKDPLDLLKEDPVAFEYLYLQSCSDVLQERFAVEMKCSSALRLAALHIQERIYACAQPQKISLKYIEKDWGIENFISPTLLRNMKGKDIKKAISFHMKRNQNLLEPRQKQLISAAQLRLNYLQILGELKTFGGKIFNATLMLQDRESCIALLVGAKYGISQIINSKLNIMSTLAEFANISRVELTEESEKVSMVKVYLQDIKVLTLLLESNSAKDLACLIAGYYRLFVNPVISIFLWPGSRQVHRVSAEEGYESRACSDSEESSEVDCVLEPLCNRRLMKVGPCRPLIKEELSPRNSLTPEMARRGPSTSGASSTTDSAESEASDSANTESRGCRTSGSSESMDALEEDDLDACSSSRSGFFHFSSSGFSEGLDSNSQEEKDRIETSGFLCLLDLAQRANPQCQKTQYSQSSAPETCSWGAELTVGRLDPRLYEDRQTDYYSLCSSVSPASHLSDSSESTASRQGRVPAVWGQQGWIEAQPSSTLEGLALHLPLDFEDGSSDEEYYDAADKLTSPHTLSGPRAISATESIATGLQSQASACTPEESLHPGPCGRGPSRRGGVKKYAKTLRKRRSFLQTDYTSQVSFPLVPSASLESMDDVCYYDRKPYLSISTTSPTVSSLQDMQGEPGLLETKALGLLAPLRETKNKNPASRVMEMEPETMETKSVIDSRVSSISAIRLRIDPNNKENSEVPHLATTAHSPSTSSLHCPNLASSGPESAQTKPFQITSPLQEPDVTAPKELTIDLSNSAFPLSSADPNSDKPEPHNVSQEDKLELGDIQLEVGLGSFLTNHIQETGSQYTEPLLSPGNGPRSDECEMNSGEMASIPTEEERQGQLSLESDSKVANKHSPNLFQEESGKDSGDSEGDVANAVPQAPNGVTPASEIITFFPLKAPGAGAEQTLPHPPRNPEGEALVQACQTQEQNLLAELDLDSNFLLGEQTIPSDFPLVGIKAEPLNHVIGDDTTPTDLPQQVYFNPSLPKPPLCQEEPDLEASNHCSLSESKDDSSSICLSTEKSFLCLAPESHPQVSAHLRRAVSLGFAGLNEVVAPGIGMEQCSCQFAYATCFRGLQPETEEEDRDLKAFSPVPLTSPPSAGSCLALPWMPARANSCSTASLSRKSHIWPEYCSRALRQLKATPAGTPEGFIHLLESLLELQDILEASWGGGHKHPPEKCTWHFLESRSRLCMGSQKLLSSCQHVIRTDQSPEEMQGAVRDTFQHLIQLAGLCFQFTDCSRCSARHREAAGNLRDVVCTYHQFVEAAKLTCERGYHDLSVKLLARQCTALTAAVFCLTQKFRASTAL