Details from NCBI annotation

Gene Symbol Rnf38
Gene Name ring finger protein 38
Entrez Gene ID 101699017

Database interlinks

Part of NW_004624930.1 (Scaffold)

For more information consult the page for NW_004624930.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNF38 ENSCPOG00000023073 (Guinea pig)

Gene Details

ring finger protein 38

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019735, Guinea pig)

Protein Percentage 95.63%
CDS Percentage 93.52%
Ka/Ks Ratio 0.09856 (Ka = 0.0156, Ks = 0.1581)

RNF38 ENSG00000137075 (Human)

Gene Details

ring finger protein 38

External Links

Gene Match (Ensembl Protein ID: ENSP00000259605, Human)

Protein Percentage 95.86%
CDS Percentage 93.75%
Ka/Ks Ratio 0.11923 (Ka = 0.0169, Ks = 0.1418)

Rnf38 ENSMUSG00000035696 (Mouse)

Gene Details

ring finger protein 38

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000095702, Mouse)

Protein Percentage 94.74%
CDS Percentage 90.06%
Ka/Ks Ratio 0.07092 (Ka = 0.0218, Ks = 0.3071)

Rnf38 ENSRNOG00000013956 (Rat)

Gene Details

ring finger protein 38 (Rnf38), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056951, Rat)

Protein Percentage 94.81%
CDS Percentage 89.47%
Ka/Ks Ratio 0.05581 (Ka = 0.0189, Ks = 0.3389)

Genome Location

Sequence Coding sequence

Length: 1560 bp    Location: 94347..37329   Strand: -
>XM_004874567.1
ATGCCGAGGCCCGGTGCTGCGGCCCGGGACCCTCGAGCGGCGTTGCGGATATCTCCCGGGGCCAATTCAGCACCTCTACCTGGCCATCCTAACAAGGTGATTTGTGAAAGGGTGAGACTTCAGAGCCTGTTCCCTCTCCTCCCAAGTGATCAGAACACTACCGTTCAAGAGGATGCTCACTTCAAAGCTTTCTTCCAGAGTGAAGATAGTCCAAGTCCTAAGAGGCAGCGCCTCTCTCATTCAGTCTTTGATTATACAGCAGCCTCGCCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAGCCAACATCACTTCTCAGGGGAACGATGCAATACACCTGCACGCAACAGAAGAAGTCCTCCTGTCAGGCGCCAGAGAGGAAGAAGGGATCGTCTGTCTCGACATAATTCTGTTAGTCAAGATGAAAACTATCATCATCTCCCTTATGCACAGCAGCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCTGCTGCTCACCCCCAGCAGAATGCAGTAATGGTTGATATACATGATCAGCTTCATCAAGGAACAGTCCCTGTTTCCTATACAGTAACAACAGTGGCACCGCATGGGATTCCACTCTGCACAGGCCAGCACATTCCTGCTTGCAGTACACAACAAGTCCCAGGGTGCTCTGTGGTTTTCAGTGGACAACACCTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCACTTACCAGTACCATATGCTGCATTCCCGCCCCTTATTTCTAGTGATCCATTTCTTATACATCCTCCTCATCTTTCTCCCCATCATCCTCCTCATTTGCCACCACCAGGCCAGTTTGTTCCTTTCCAAACACAGCAATCACGATCGCCTCTGCAGAGGATAGAAAATGAAGTGGAACTCTTAGGAGAACATCTTCAAGTAGGAAGTTTTACTTATCCTCCATCAGCCCATCCCCCAACATTNNNNNNNNNNNNNNNNNNNNTTCTTTTAACATTTTTTCACCTACAGCCTTATCCTCCATTCATGCCTCGGAGGCTCACTGGACGTAGTAGATATCGATCCCAACAGCCAATACCACCTCCCCCTTATCATCCCAGCTTACTACCATATGTGTTATCAATGCTGCCAGTGCCACCTGCAGTGGGCCCAACTTTCAGCTTTGAATTGGATGTAGAAGATGGAGAAGTAGAAAATTATGAGGCCCTATTAAATCTGGCAGAGCGACTAGGAGAGGCAAAGCCTCGAGGACTGACAAAAGCAGATATTGAACAACTTCCTTCTTACCGGTTCAATCCTAACAACCACCAGTCAGAACAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAATCAAGGCAGCTACTTAGAGTCTTACCCTGTAACCATGAGTTCCATGCCAAGTGTGTTGATAAGTGGCTTAAGGCAAATCGTACCTGCCCAATTTGCCGAGCTGATGCTTCAGAAGTACATCGGGATTCAGAATGA

Related Sequences

XP_004874624.1 Protein

Rnf38 PREDICTED: RING finger protein 38-like [Heterocephalus glaber]

Length: 519 aa      View alignments
>XP_004874624.1
MPRPGAAARDPRAALRISPGANSAPLPGHPNKVICERVRLQSLFPLLPSDQNTTVQEDAHFKAFFQSEDSPSPKRQRLSHSVFDYTAASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSVSQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTXXXXXXXXLLTFFHLQPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE