Sequence details NCBI ID: XM_004874422.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slc22a6
Gene Name solute carrier family 22 (organic anion transporter), member 6, transcript variant X2
Entrez Gene ID 101704127

Database interlinks

Part of NW_004624926.1 (Scaffold)

For more information consult the page for NW_004624926.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC22A6 ENSCPOG00000015195 (Guinea pig)

Gene Details

solute carrier family 22 (organic anion transporter), member 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013697, Guinea pig)

Protein Percentage 90.33%
CDS Percentage 88.99%
Ka/Ks Ratio 0.08735 (Ka = 0.0482, Ks = 0.5518)

SLC22A6 ENSG00000197901 (Human)

Gene Details

solute carrier family 22 (organic anion transporter), member 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000367102, Human)

Protein Percentage 80.71%
CDS Percentage 82.26%
Ka/Ks Ratio 0.12265 (Ka = 0.1082, Ks = 0.8818)

Slc22a6 ENSMUSG00000024650 (Mouse)

Gene Details

solute carrier family 22 (organic anion transporter), member 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000010250, Mouse)

Protein Percentage 81.65%
CDS Percentage 80.67%
Ka/Ks Ratio 0.09252 (Ka = 0.1081, Ks = 1.1682)

Slc22a6 ENSRNOG00000018215 (Rat)

Gene Details

solute carrier family 22 (organic anion transporter), member 6 (Slc22a6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024756, Rat)

Protein Percentage 82.12%
CDS Percentage 81.14%
Ka/Ks Ratio 0.09046 (Ka = 0.1032, Ks = 1.1404)

Genome Location

Sequence Coding sequence

Length: 1683 bp    Location: 1368652..1363105   Strand: -
Raw sequence   
>XM_004874422.1
ATGGCCTTCAATGACCTCCTGAAGCAGGTGGGGGGCGTCGGCCGCTTCCAGCAGGTCCAGGTCGCCTTGGTGGTCCTGCCACTGCTCCTGATGGCCTCACACAACACCCTGCAGAACTTCACAGCTGCCATCCCCCACCACCACTGCCGGGTGCCCCCCAATGCCAGCCTCATTCCGGAGGAGGAGCTCGGGGCCTGGCTGCCCCGGGACGCACGGGGGAGGCCTGAGTCCTGCCTGCGCTTTGCTACCCCGAGGCGGGGACCACCCCTCACCAACAGCAGCACAGCCAACATCACGGAGCCCTGCGTGGACGGCTGGATCTACGACGACAGCACCTTCCCGTCCACCATCGTGACGGAGTGGGACCTTGTGTGCTCGCACCGGGCGCTCCGCCAGCTGGCTCAGTCCCTCTACATGGTCGGGGTGCTACTAGGTGCAGTGTCCTTCGGCCACCTGGCAGACAGGCTGGGCCGCCGCAAGGTGCTGATCCTGAACTACCTGCAGACAGCCGTGTCGGGGACCTGCGCCGCCTATGCCCCCAACTTCCCCCTCTACTGCACCTTCCGGCTGCTCTCTGGCATGTCCCTGGCTAGCATCGCCATCAACTCCATGACGATAAATGTGGAGTGGATGCCCATTCACACGCGCGCCTACGTGGGCACCCTGACTGGCTATGCCTACAGCCTGGGCCAGTTCCTGCTAGCCGGCCTGGCCTACGCCGTGCCTCGGTGGCGCCACCTGCAGCTCCTGGTCTCGGTGCCCTTCTACGCCTTCTTCCTGTACTCCTGGTTCTTCACCGAGTCGGCCCGCTGGCTCTCCTCTCGAGGGAGGTTGGACCTCACACTGAGCACCCTGCAGAGAGTGGCCCGGATCAACGGGAAGCAGGCAGAGGGCGCCAAGCTGAGCCTGGAGGTGCTCCGGACCAGTCTGCAGAAGGAACTGACCCTGGGCAAAGCCCAGGCCTCTGCCGTGGACCTGCTACGCTGCCCTGCCCTCCGCCGCCTGTTCCTCTGCCTCTCCATGCTGTGGTTTGCCACCAGCTTTGCCTACTACGGCCTGGTCATGGACCTGCAGGGCTTTGGGGTCAGCGTCTACCTGATCCAGGTGATCTTCGGTGCTGTAGATCTGCCTGCCAAGCTCGTGTGCTTCCTGGTCATCAATTCCCTGGGCCGCCGGCCAGCACAGGCAGCCTCCCTCCTGCTGGCAGGCATCTGCATCCTGGTGAATGCAGTGATACCCCGAGACCAGACAATCGTCCGCACCTCCCTCGCGGTGCTGGGGAAGGGGTGCCTGGCTTCCTCCTTCAATTGCATCTTCCTATACACGGGGGAGCTGTACCCCACCATAATCCGGCAGACGGGCTTGGGCGTGGGCAGCACCGTGGCCCGGGTGGGCAGCATCGTGAGCCCCCTAGTGAGCATGACCACTGAGCTCTACCCCACCGCTCCCCTCTTCATCTTCGGCGCCATCCCTGTGGCCGCCAGCGCAGCCACAGCCCTGCTGCCCGAGACGAGGGGCCAGCCGCTGCCCGACACTGTGCAGGACCTGGACAGCAGGTGGCCACACACTCAGAGATTGCTCTCCCCACCCAGGAGGACAGGGAGACTGAGGCAGCCACAGCAGGAGCAGCAGAAGCAGATGGTGCCGCTGCAGGGCACCGCTCCGGAGAAAAACGGACTCTGA

Related Sequences

XP_004874479.1 Protein

Slc22a6 PREDICTED: solute carrier family 22 member 6 isoform X2 [Heterocephalus glaber]

Length: 560 aa      View alignments
>XP_004874479.1
MAFNDLLKQVGGVGRFQQVQVALVVLPLLLMASHNTLQNFTAAIPHHHCRVPPNASLIPEEELGAWLPRDARGRPESCLRFATPRRGPPLTNSSTANITEPCVDGWIYDDSTFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAVSFGHLADRLGRRKVLILNYLQTAVSGTCAAYAPNFPLYCTFRLLSGMSLASIAINSMTINVEWMPIHTRAYVGTLTGYAYSLGQFLLAGLAYAVPRWRHLQLLVSVPFYAFFLYSWFFTESARWLSSRGRLDLTLSTLQRVARINGKQAEGAKLSLEVLRTSLQKELTLGKAQASAVDLLRCPALRRLFLCLSMLWFATSFAYYGLVMDLQGFGVSVYLIQVIFGAVDLPAKLVCFLVINSLGRRPAQAASLLLAGICILVNAVIPRDQTIVRTSLAVLGKGCLASSFNCIFLYTGELYPTIIRQTGLGVGSTVARVGSIVSPLVSMTTELYPTAPLFIFGAIPVAASAATALLPETRGQPLPDTVQDLDSRWPHTQRLLSPPRRTGRLRQPQQEQQKQMVPLQGTAPEKNGL