Details from NCBI annotation

Gene Symbol Top1
Gene Name topoisomerase (DNA) I, transcript variant X1
Entrez Gene ID 101704241

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624919.1 (SequenceType object (1))

For more information consult the page for NW_004624919.1 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TOP1ENSCPOG00000009076 (Guinea pig)

Gene Details

topoisomerase (DNA) I

External Links

Gene Match(Ensembl Protein ID:ENSCPOP00000008149, Guinea pig)

Protein Percentage 98.44%
CDS Percentage 95.75%
Ka/Ks Ratio 0.03818 (Ka = 0.0069, Ks = 0.1801)

TOP1ENSG00000198900 (Human)

Gene Details

topoisomerase (DNA) I

External Links

Gene Match(Ensembl Protein ID:ENSP00000354522, Human)

Protein Percentage 98.04%
CDS Percentage 93.55%
Ka/Ks Ratio 0.02551 (Ka = 0.0085, Ks = 0.332)

Top1ENSMUSG00000070544 (Mouse)

Gene Details

topoisomerase (DNA) I

External Links

Gene Match(Ensembl Protein ID:ENSMUSP00000105094, Mouse)

Protein Percentage 97.65%
CDS Percentage 91.05%
Ka/Ks Ratio 0.01796 (Ka = 0.0101, Ks = 0.56)

Genome Location

Sequence SequenceType object (2)

Length: 2307 bp    Location: 1669067..1756607   Strand: +
>XM_004874029.1
ATGAGTGGGGACCATCTCCACAACGATTCCCAGATCGAAGCGGATTTCCGATTGAATGATTCTCATAAACACAAAGATAAACACAAAGATCGAGAACACCGCCATAAAGAGCACAAGAAGGACAAGGAGAAGGACCGGGAAAAGTCCAAGCATAGCAACAGTGAACATAAAGATTCTGAAAAAAAACACAAAGAGAAAGAAAAAACCAAACACAAAGATGGAAGCTCAGAAAAGCATAAAGACAAACACAAAGACAGAGACAAGGAAAAACGGAAGGAGGAAAAGGTTAGAGCCTCTGGGGATGCAAAAATAAAGAAGGAGAAGGAAAATGGCTTCTCTAGCCCACCACGAATTAAAGATGAACCTGAAGATGATGGCTATTTTGCTCCTCCTCCTAAAGAGGATCTAAAACCATTGAAGAGACCTCGAGACGAGGATGATGCTGATTACAAACCTAAGAAAATTAAAACAGAAGATACCAAGAAGGAGAAAAAACGAAAACTAGAGGAAGAGGAGGATGGTAAATTGAAAAAACCCAAGAATAAAGATAAAGATAAAAAAGTTCCTGAGCCAGATAACAAGAAAAAGAAGCCGAAGAAAGAAGAGGAACAGAAGTGGAAATGGTGGGAAGAAGAACGGTATCCTGAAGGCATCAAGTGGAAATTCCTAGAACATAAAGGTCCTGTATTTGCTCCGCCATATGAGCCTCTTCCAGACAGTGTCAAGTTTTACTATGATGGTAAAGTCATGAAGCTGAGCTCTAAAGCAGAAGAAATAGCTACATTCTTTGCAAAAATGCTTGACCATGAATATACTACTAAGGAAATATTTAGGAAAAATTTCTTTAAAGATTGGAGAAAGGAAATGACTAATGAAGAGAAGAGTACTATCACCAACCTAAGCAAATGTGATTTTACTCAGATGAGCCAGTATTTCAAAGCCCAGTCGGAAGCTCGGAAACAGATGAGCAAGGAAGAAAAATTGAAAATCAAAGAGGAAAATGAAAAATTACTGAAAGAGTATGGCTTCTGTATTATGGATAACCACAGAGAGAGGATTGCTAACTTCAAGATAGAGCCCCCGGGGCTATTCCGTGGCCGGGGCAACCACCCCAAGATGGGCATGTTGAAGCGGAGGATCCTGCCCGAGGACATAATCATAAACTGCAGCAAAGATGCCAAGGTACCTTCTCCTCCTCCAGGACATAAGTGGAAAGAGGTCAGGCATGACAACAAAGTAACTTGGCTGGTCTCCTGGACAGAGAATATCCAAGGTTCCATTAAATACATCATGTTGAATCCCAGTTCAAGAATTAAGGGTGAAAAAGACTGGCAGAAATATGAGACTGCTCGGCGGCTAAAGAAGTGTGTGGACAAGATCCGAAACCAGTATCGAGAAGACTGGAAGTCCAAAGAGATGAAAGTCCGGCAGAGAGCTGTAGCACTGTACTTCATTGACAAGCTTGCTCTGAGAGCAGGAAATGAGAAGGAAGAAGGAGAAACAGCAGACACTGTGGGTTGCTGTTCGCTTCGTGTGGAGCACATCAACCTGCACCCAGAATTGGATGGTCAGGAATACGTGGTTGAGTTTGACTTCCCTGGGAAGGACTCAATTAGATACTATAACAAGGTCCCAGTTGAGAAACGAGTTTTTAAGAACTTGCAGCTATTTATGGAGAATAAGCAGCCCGAGGATGATCTTTTTGATAGACTTAATACTGGTATTCTAAATAAGCACCTTCAGGATCTCATGGAGGGCTTGACAGCCAAGGTATTCCGTACATACAATGCCTCCATCACGCTACAGCAGCAGCTAAAGGAACTCACAGCCCCGGATGAGAACATCCCAGCAAAGATTCTCTCTTACAACCGTGCCAATCGAGCAGTTGCGATTCTTTGTAACCATCAGAGGGCACCACCAAAAACTTTCGAGAAATCTATGATGAACTTGCAGTCTAAGATTGATGCCAAGAAGGATCAGCTTGCAGATGCTCGGAGGGACCTGAAAAGTGCAAAAGCTGATGCCAAAGTCATGAAGGATGCAAAGACCAAGAAGGTAGTAGAGTCAAAGAAGAAGGCTGTGCAGAGACTGGAGGAGCAGTTGATGAAGCTGGAAGTTCAGGCCACAGATCGTGAGGAGAATAAGCAAATTGCCTTGGGAACCTCCAAACTCAATTATCTGGATCCTCGGATCACAGTGGCTTGGTGCAAGAAGTGGGGGGTCCCAATTGAAAAAATTTACAACAAAACCCAGCGGGAGAAGTTTGCCTGGGCCATCGACATGGCTGATGAGGACTATGAATTTTAA

Related Sequences

XP_004874086.1 SequenceType object (4)

Top1 PREDICTED: DNA topoisomerase 1 isoform X1 [Heterocephalus glaber]

Length: 768 aa     
>XP_004874086.1
MSGDHLHNDSQIEADFRLNDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHKDKHKDRDKEKRKEEKVRASGDAKIKKEKENGFSSPPRIKDEPEDDGYFAPPPKEDLKPLKRPRDEDDADYKPKKIKTEDTKKEKKRKLEEEEDGKLKKPKNKDKDKKVPEPDNKKKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPDSVKFYYDGKVMKLSSKAEEIATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKSTITNLSKCDFTQMSQYFKAQSEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHRERIANFKIEPPGLFRGRGNHPKMGMLKRRILPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFPGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKDQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMADEDYEF