Sequence details NCBI ID: XM_004874025.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Casp4
Gene Name caspase 4, apoptosis-related cysteine peptidase
Entrez Gene ID 101700797

Database interlinks

Part of NW_004624918.1 (Scaffold)

For more information consult the page for NW_004624918.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000011825 (Guinea pig)

Gene Details

Caspase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010637, Guinea pig)

Protein Percentage 64.02%
CDS Percentage 73.63%
Ka/Ks Ratio 0.51699 (Ka = 0.2841, Ks = 0.5495)

Genome Location

Sequence Coding sequence

Length: 1335 bp    Location: 145661..187006   Strand: +
Raw sequence   
>XM_004874025.1
ATGGAGGAATGTGGCGAAGAAAAACAAGGCATCCATGTTTCTTTGAAAGATAATGCGCAGAAGGAGTGGGAGAAATTACAAGAGGCGTATAATAATTATATGAAGGCCAAATATGGAGGCAAAGAGATCAAGGATACAAAAGAAACCTCCCAAAGATATCGACCACTTGAAAAGCAGGAACTTGACAAAGAAAAACAAGGCATCGATGTTTGTTCAGAAGATAATGTGCAGAAGGCGTTTGAGAAATTTGAACAGACCCGGCTAAATTTTATAAGGGCCAAGTATTTAGGCAAAGAGATCAAGGATACAAAAGAAAGCTACAACGGAAAACCACCACTTAAAATCCAAGAACTTGACAAAGAAAAACAAGGCAACGATGTTTGTTTGGATGATATTCTGCAGAAGACGCACTTGTATTTAAACCAGGCCCAGAAATATTATACGAAGGCCGAGCATCTCCATGTTCTTCTGGAAAATCTGTCTGAACCAGTTGCATCCTCAGAAACTACTGACACCCTCAAGACATGTTCCCCCGAGGAGTTCCTGAGAGTTCGTACAGAAAGGGCTGCAGAGATCTACCCAATAAAGGACAAAAATGAACGCAGTCGCCAGGCTCTCATCATATGCAATATAGTGTTTGACCACCTTTCTGTAAGGAATGGGGCCAAATATGACATCATAGGAATGAAGAAGCTGCTTGAGGGCCTAGACTACACTGTGACTGTGAAAGAGAATCTTACAGCCAAGGATATGGCCTCAGTGCTGAGTGAATTTGCTGACAAACCGGAGCACAAGTTGTCAGACAGCACATTCTTGGTATTTATGTCTCATGGTATCCTGCAAGGAATATGTGGAATTATGCATAGTGAGAAAAACCCCGATGTGCTTCAATATGACACCATCTTCAACATATTCAACAATAAGAATTGCCCTGATCTAAGAGACAAACCCAAAGTCATCATTGTACAGGCCTGCAGAGGTGGAAACTCCGGGGGAGTGTGGGTCAGAGATTCTCCAGCAGCCCTGGAAGACGCCCCAGCCCAGTCACCTGAAAACCTGGAGTCCGATGCTGTTTATATGACCCACGTGGAGAAGGATTTCATCACTTTCCACTCCACAACCCCACATAATGAGTCCTGGAGAAACACTACAAAAGGTTCCTACTTTATCATAAAACTTATCGCAGGTTTGCAGAAATATGCCTGGTGTTATCCTCTACAGGAAATATTCCAGAAGATACAGCTATCATGTGAAAAGGCAAATGATATAGCCCAGATGCCCACTATTGAGCGGTCAACTGCAGGAAGATTATTCTTCCTCTTCCCCGGCAACTGA

Related Sequences

XP_004874082.1 Protein

Casp4 PREDICTED: caspase-4 [Heterocephalus glaber]

Length: 444 aa      
>XP_004874082.1
MEECGEEKQGIHVSLKDNAQKEWEKLQEAYNNYMKAKYGGKEIKDTKETSQRYRPLEKQELDKEKQGIDVCSEDNVQKAFEKFEQTRLNFIRAKYLGKEIKDTKESYNGKPPLKIQELDKEKQGNDVCLDDILQKTHLYLNQAQKYYTKAEHLHVLLENLSEPVASSETTDTLKTCSPEEFLRVRTERAAEIYPIKDKNERSRQALIICNIVFDHLSVRNGAKYDIIGMKKLLEGLDYTVTVKENLTAKDMASVLSEFADKPEHKLSDSTFLVFMSHGILQGICGIMHSEKNPDVLQYDTIFNIFNNKNCPDLRDKPKVIIVQACRGGNSGGVWVRDSPAALEDAPAQSPENLESDAVYMTHVEKDFITFHSTTPHNESWRNTTKGSYFIIKLIAGLQKYAWCYPLQEIFQKIQLSCEKANDIAQMPTIERSTAGRLFFLFPGN