Sequence details NCBI ID: XM_004873969.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ppil6
Gene Name peptidylprolyl isomerase (cyclophilin)-like 6, transcript variant X1
Entrez Gene ID 101702924

Database interlinks

Part of NW_004624916.1 (Scaffold)

For more information consult the page for NW_004624916.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PPIL6 ENSCPOG00000003098 (Guinea pig)

Gene Details

peptidylprolyl isomerase (cyclophilin)-like 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002805, Guinea pig)

Protein Percentage 88.1%
CDS Percentage 90.57%
Ka/Ks Ratio 0.25429 (Ka = 0.059, Ks = 0.2319)

PPIL6 ENSG00000185250 (Human)

Gene Details

peptidylprolyl isomerase (cyclophilin)-like 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000392257, Human)

Protein Percentage 79.74%
CDS Percentage 85.1%
Ka/Ks Ratio 0.36185 (Ka = 0.1231, Ks = 0.3403)

Ppil6 ENSMUSG00000078451 (Mouse)

Gene Details

peptidylprolyl isomerase (cyclophilin)-like 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101146, Mouse)

Protein Percentage 77.17%
CDS Percentage 80.49%
Ka/Ks Ratio 0.21661 (Ka = 0.1338, Ks = 0.6176)

Ppil6 ENSRNOG00000043186 (Rat)

Gene Details

Protein Ppil6

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061000, Rat)

Protein Percentage 77.17%
CDS Percentage 80.17%
Ka/Ks Ratio 0.21535 (Ka = 0.1372, Ks = 0.6372)

Genome Location

Sequence Coding sequence

Length: 936 bp    Location: 697871..671375   Strand: -
Raw sequence   
>XM_004873969.1
ATGGCGGGCGTTCAGCAGTGCCTGTCCCAACTTGCCGCGTGCAGCTCGCCGTCGGCGCCCGAGCGGCCGCTGCAGGTGAAGGTGGTGGGACTCTTCAAAAGCTCCAGCTTTCAGATCGCGAAGATCATGGCCGAGAGTCTGAAGAATACTTATCCATCAAAATTTGAAGATTCTATAATAATTCCTCTTCAAGAATTTTCCTGGGATCAGTATCTACAGGAGAAAAAAAGGGAACTCAAGGGTGAAATCTGGGAGTATTCTTCCCATGTGATGTGTTTCCTCAATGACCAACTCCTGGGGGATGCACTTGACCTACAGAGATGGGCCCAGAAGGTGTGGGATGTTGTGGATGTGAAGCCCACTGCACTATATGAGGCACTTACTTTGGATTATTCCACTAAATTCTTAAGAGACACCAAGCATGATTTTGTGTTCTTGGACATTGGTATCGATTTTTTTCCAATTGGAAGATTGATTTTTGAGCTGTACTGTGATACATGTCCCAAAACATGTAGAAATTTTCAGACGTTGTGTACGGGAAAAGCAGGGTTTTCCCAAAGAGGCATAAGGCTACATTACAAAGGGTCAATTTTTCATCGAGTAGTACAGAATGGCTGGATACAAGGAGGAGATATAGTAGCTGGAAAAGGAAATGACGGAGAGTCTATTTATGGACCAACATTTGAAGATGAAAACTTTTCAATTCCTCATAATAAAAGAGGAGTTCTTGGAATGGTCAACAAAGGCTGTCACAGCAACGGGTCACAATTCTATATTACACTACAAGCAACTCCCTACCTAGATAGGAAATATGTGGCATTTGGGCAATTGATTGAAGGAACAGAAGTTCTTAAACAACTAGAATTAGTTCCAACAGAGAATGAAAGACCAGTACAAATATGTAGCATTACTGACAGTGGAGATCTTTATGCCTGA

Related Sequences

XP_004874026.1 Protein

Ppil6 PREDICTED: peptidyl-prolyl cis-trans isomerase-like 6 isoform X1 [Heterocephalus glaber]

Length: 311 aa      View alignments
>XP_004874026.1
MAGVQQCLSQLAACSSPSAPERPLQVKVVGLFKSSSFQIAKIMAESLKNTYPSKFEDSIIIPLQEFSWDQYLQEKKRELKGEIWEYSSHVMCFLNDQLLGDALDLQRWAQKVWDVVDVKPTALYEALTLDYSTKFLRDTKHDFVFLDIGIDFFPIGRLIFELYCDTCPKTCRNFQTLCTGKAGFSQRGIRLHYKGSIFHRVVQNGWIQGGDIVAGKGNDGESIYGPTFEDENFSIPHNKRGVLGMVNKGCHSNGSQFYITLQATPYLDRKYVAFGQLIEGTEVLKQLELVPTENERPVQICSITDSGDLYA