Details from NCBI annotation

Gene Symbol Smpd2
Gene Name sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)
Entrez Gene ID 101702568

Database interlinks

Part of NW_004624916.1 (Scaffold)

For more information consult the page for NW_004624916.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMPD2 ENSCPOG00000003102 (Guinea pig)

Gene Details

sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002808, Guinea pig)

Protein Percentage 85.07%
CDS Percentage 88.7%
Ka/Ks Ratio 0.29881 (Ka = 0.0822, Ks = 0.2751)

SMPD2 ENSG00000135587 (Human)

Gene Details

sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)

External Links

Gene Match (Ensembl Protein ID: ENSP00000258052, Human)

Protein Percentage 80.09%
CDS Percentage 85.47%
Ka/Ks Ratio 0.32088 (Ka = 0.1143, Ks = 0.3563)

Smpd2 ENSMUSG00000019822 (Mouse)

Gene Details

sphingomyelin phosphodiesterase 2, neutral

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000019965, Mouse)

Protein Percentage 76.37%
CDS Percentage 81.54%
Ka/Ks Ratio 0.25393 (Ka = 0.1378, Ks = 0.5425)

Smpd2 ENSRNOG00000000306 (Rat)

Gene Details

sphingomyelin phosphodiesterase 2, neutral membrane (Smpd2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000336, Rat)

Protein Percentage 78.15%
CDS Percentage 82.66%
Ka/Ks Ratio 0.23568 (Ka = 0.1247, Ks = 0.5291)

Genome Location

Sequence Coding sequence

Length: 1671 bp    Location: 697856..701012   Strand: +
>XM_004873968.1
ATGGGCGGGGCCTCTCTTCCCTGGTCGTCTGTTGCTAGAGAGCGGGGCGAGGGGCCTGTGAGGGTCTCGCGGGCGGCGGCGGCCAGGGGTGCGCTTCGGGCCGGAGAAAACGAGAGCGGCAGCTTGGGACCCCTCTTGGGACCTCCAGGGGCTTCGCGCGCCGCCCTCGTTGACCCGCGGCGCCGGAACTTTACAGCAGCTCTCCTTTCCGGGTTGGTGATCCGCCTGAGCTGGGCCAGCGAGCGCGCCGGGGTCCGGGTGACGCGGGGCAGCCCCACGCCGCAGCCGCCCGGACTTGGGCGGGGCGGAGCGCGGCCGGCCACCTGTGCGCACCGCCGGCCACCTGTGCGAGCCGCCTCCGCAGCGTGGCTGGGGAGGTCGACGGTCCGGTCCCTGAGCGCCATGAAGCCCAACTTCTCGCTCCAACTGAGGGTCTTCAACCTCAACTGCTGGGACATTCCCTACGTGAGCAAGCACCGGGCTGACCGCATTAAGCGCCTGGGAGACTTTCTGAACATGGAGAGCTTCGACCTGGCCCTCTTGGAGGAGGTGTGGAGTGAGCAGGACTTCCAATACCTGAGGCAGAAGCTGGTTGTGACATACCCAGCTGCACACTACTTCAGGAGCGGAATCATTGGCAGTGGCCTCTGTGTCTTCTCCAAACACCCAATCCAGGAAATCTGCCAGCACGTCTATACCCTCAATGGCTACCCCTACATGATCCATCATGGTGACTGGTTCTGTGGGAAAGCTGTGGGGCTGCTGGTGCTCCATCTCAGTGGACTGGTGCTGAATGCTTACGTGACCCATCTGCATGCTGAATACAGTCGACAGAAGGACATCTACCTAACACATCGTGTGGCCCAAGCTTGGGAACTGGCCCAGTTCATCCACCATACATCCAAGAAGGCAGATGTGGTTCTGTTGTGTGGGGACCTCAACATGCACCCAGGAGACCTGGGCTGCTGCCTGCTTAACGAGTACACAGGCCTACATGATGCCTACCTCAAGACCCAAGACTTCAAGGGCCCTGAAGAAGGCTACACCATGATAAAGCAGAACTGCTACGTCAGCCAGCAGGACCTGGGGCAATTTCCTTTTGGCATTCGAATTGACTATGTGCTTTACAAGGTGGTTTCTGGGTTCTACATCTCCTGTAAGACGCTCAAGACCACTACTGGCCATCACCCTCACAGTGGCACTCCACTCTCTGATCATGAGGCCCTCATGACAACTTTGTGTATAAGGCATGGTCCCCCTGAGCAGGACCACAGCCCTTCCCACGGACCAGCAGAGAAGTCATCACTGATCAGAGTGCTAAGGGACACCTGGATAGAGCTGGAGCTGGGCATAGCTCGAGCTCGCTGGTGGACTGCCTTCGCTGGCTATGTGGTTGGTCTGGGGCTGCTTCTCCTGGTGTTACTGTGTGTCCTGGTAGCAGGGGAAGGGGCCAGGGAAGTGGCCATACTGCTCTGGAGCCCCAGTGTAGGATTGGTGCTAGGGGCAGGCGCAGTCTCCCTCTTCCACATGCAGGAAGCCAATGGCTTATGTAGGGTCCAGGGTGAGCTCCAGCATGTGCTGGGAAAGGCAAAGGAGGCCCAGGACTTGGGCCCAGAGCCTCAGCTAGCCCCACTCCTGGCCCAGCAGGAGGAGGACAGAGCTGAGGAATAA

Related Sequences

XP_004874025.1 Protein

Smpd2 PREDICTED: sphingomyelin phosphodiesterase 2 [Heterocephalus glaber]

Length: 556 aa      View alignments
>XP_004874025.1
MGGASLPWSSVARERGEGPVRVSRAAAARGALRAGENESGSLGPLLGPPGASRAALVDPRRRNFTAALLSGLVIRLSWASERAGVRVTRGSPTPQPPGLGRGGARPATCAHRRPPVRAASAAWLGRSTVRSLSAMKPNFSLQLRVFNLNCWDIPYVSKHRADRIKRLGDFLNMESFDLALLEEVWSEQDFQYLRQKLVVTYPAAHYFRSGIIGSGLCVFSKHPIQEICQHVYTLNGYPYMIHHGDWFCGKAVGLLVLHLSGLVLNAYVTHLHAEYSRQKDIYLTHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPGDLGCCLLNEYTGLHDAYLKTQDFKGPEEGYTMIKQNCYVSQQDLGQFPFGIRIDYVLYKVVSGFYISCKTLKTTTGHHPHSGTPLSDHEALMTTLCIRHGPPEQDHSPSHGPAEKSSLIRVLRDTWIELELGIARARWWTAFAGYVVGLGLLLLVLLCVLVAGEGAREVAILLWSPSVGLVLGAGAVSLFHMQEANGLCRVQGELQHVLGKAKEAQDLGPEPQLAPLLAQQEEDRAEE