Sequence details NCBI ID: XM_004873884.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vps35
Gene Name vacuolar protein sorting 35 homolog (S. cerevisiae)
Entrez Gene ID 101697141

Database interlinks

Part of NW_004624914.1 (Scaffold)

For more information consult the page for NW_004624914.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VPS35 ENSCPOG00000003773 (Guinea pig)

Gene Details

vacuolar protein sorting 35 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003407, Guinea pig)

Protein Percentage 99.25%
CDS Percentage 95.77%
Ka/Ks Ratio 0.02278 (Ka = 0.004, Ks = 0.1754)

VPS35 ENSG00000069329 (Human)

Gene Details

vacuolar protein sorting 35 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000299138, Human)

Protein Percentage 99.87%
CDS Percentage 94.18%
Ka/Ks Ratio 0.0024 (Ka = 0.0006, Ks = 0.2478)

Vps35 ENSMUSG00000031696 (Mouse)

Gene Details

vacuolar protein sorting 35

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034131, Mouse)

Protein Percentage 99.25%
CDS Percentage 91.62%
Ka/Ks Ratio 0.00865 (Ka = 0.0035, Ks = 0.4051)

Vps35 ENSRNOG00000017612 (Rat)

Gene Details

vacuolar protein sorting 35 homolog (S. cerevisiae) (Vps35), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024020, Rat)

Protein Percentage 99.25%
CDS Percentage 91.67%
Ka/Ks Ratio 0.00894 (Ka = 0.0035, Ks = 0.3944)

Genome Location

Sequence Coding sequence

Length: 2391 bp    Location: 188486..161255   Strand: -
Raw sequence   
>XM_004873884.1
ATGCCTACAACACAGCAGTCACCTCAGGATGAACAGGAGAAACTCTTGGATGAAGCCATACAGGCTGTAAAGGTTCAGTCATTCCAGATGAAGAGATGCTTGGACAAGACCAAGCTTATGGATGCTCTGAAACATGCATCTAATATGCTTGGTGAACTCCGGACTTCTATGTTATCACCAAAGAGCTACTATGAACTTTATATGGCTATTTCTGATGAACTGCACTACTTGGAGGTCTACTTGACAGATGAGTTTGCCAAAGGAAGGAAAGTGGCAGATCTCTATGAGCTTGTACAATATGCTGGAAACATTATCCCAAGGCTTTATCTGTTGATCACAGTTGGAGTTGTATACGTCAAGTCATTTCCTCAATCCAGGAAAGATATTTTGAAAGATTTGGTAGAAATGTGCCGTGGTGTGCAACATCCATTGAGGGGTTTATTTCTTCGAAACTACCTTCTTCAGTGTACCAGAAACATTTTACCTGACGAAGGAGAGCCAACAGATGAAGAAACGACTGGGGATATCAGTGATTCCATGGATTTTGTACTACTCAACTTTGCAGAAATGAACAAGTTGTGGGTTCGGATGCAACATCAAGGACATAGCCGAGATAGAGAAAAAAGAGAACGAGAAAGACAAGAGCTGAGAATTTTAGTAGGAACAAATTTGGTGCGCCTCAGTCAATTGGAAGGTGTAAATGTGGAACGTTACAAACAGATTGTTTTAACTGGTATATTGGAGCAGGTTGTGAATTGTAGGGATGCTTTGGCTCAAGAATATCTCATGGAGTGTATTATTCAGGTTTTTCCTGATGAATTCCACCTCCAGACTTTGAACCCTTTTCTTCGGGCCTGTGCTGAGTTACACCAAAATGTAAACGTAAAAAATATAATCATTGCTTTAATTGATAGATTAGCTTTATTTGCTCATCGTGAAGATGGGCCTGGAATCCCAGCAGATATTAAGCTTTTTGATATATTCTCACAGCAAGTGGCTACAGTGATACAGTCTAGACAAGACATGCCTTCAGAGGATGTTGTATCTTTACAAGTCTCTCTCATTAATCTTGCTATGAAATGTTATCCTGATCGTGTGGACTATGTTGATAAAGTTCTAGAAACAACAGTGGAGATATTCAACAAGCTCAACCTTGAACATATTGCTACCAGTAGTGCAGTTTCAAAGGAACTCACCAGACTTTTAAAGATACCTGTTGATACTTACAACAATATTTTGACAGTCTTGAAATTAAAACATTTCCACCCACTCTTCGAGTACTTTGACTACGAGTCCAGAAAGAGTATGAGTTGTTATGTGCTTAGTAATGTTCTGGATTATAATACAGAAATTGTCTCTCAAGACCAGGTGGATTCCATAATGAACTTGGTGTCCACGTTGATTCAGGATCAGCCAGATCAACCTGTAGAAGACCCTGATCCAGAAGACTTTGCTGATGAGCAGAGCCTTGTGGGCCGATTCATTCATCTTCTTCGGTCTGAGGACCCTGATCAGCAGTATTTGATCTTAAACACCGCACGAAAGCATTTTGGAGCTGGTGGAAATCAGCGGATTCGCTTCACACTGCCACCTTTGGTATTTGCAGCTTACCAGCTGGCTTTTCGATACAAAGAGAATTCTAAAGTGGATGACAAATGGGAAAAAAAATGCCAGAAGATTTTTTCATTTGCTCACCAGACTATCAGTGCTTTGATCAAAGCAGAGCTGGCAGAATTACCTTTAAGACTTTTTCTTCAAGGAGCACTAGCTGCTGGAGAAATTGGTTTTGAAAATCATGAAACAGTAGCATATGAGTTTATGTCCCAGGCATTTTCCCTGTATGAAGATGAAATCAGTGATTCCAAAGCACAGCTGGCTGCCATTACCTTGATCATTGGTACTTTTGAGAGAATGAAATGCTTCAGTGAAGAGAATCATGAACCCTTGAGAACTCAGTGTGCACTTGCTGCATCCAAACTTCTGAAAAAGCCCGACCAGGGCCGAGCTGTGAGCACCTGTGCACATCTCTTCTGGTCTGGCAGAAACACAGACAAAAATGGGGAGGAGCTTCATGGAGGGAAGAGGGTCATGGAGTGCCTAAAGAAAGCTCTAAAAATAGCAAATCAGTGTATGGACCCCTCTCTACAAGTGCAGCTGTTTATAGAAATTCTAAACAGATATATCTATTTTTATGAAAAGGAAAATGATGCGGTAACAATTCAGGTGTTGAACCAGCTTATCCAAAAGATTCGAGAAGACCTCCCAAACCTTGAGTCCAGTGAAGAAACAGAACAGATTAACAAACATTTTCATAACACACTAGAGCATTTGCGTTTGAGGCGAGAATCACCAGAGTCTGAGGGGCCAATTTATGAAGGTCTTATCCTTTAA

Related Sequences

XP_004873941.1 Protein

Vps35 PREDICTED: vacuolar protein sorting-associated protein 35 [Heterocephalus glaber]

Length: 796 aa      View alignments
>XP_004873941.1
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKTKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL