Sequence details NCBI ID: XM_004873618.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sec22a
Gene Name SEC22 vesicle trafficking protein homolog A (S. cerevisiae)
Entrez Gene ID 101702093

Database interlinks

Part of NW_004624912.1 (Scaffold)

For more information consult the page for NW_004624912.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEC22A ENSCPOG00000009176 (Guinea pig)

Gene Details

SEC22 vesicle trafficking protein homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008238, Guinea pig)

Protein Percentage 98.37%
CDS Percentage 96.31%
Ka/Ks Ratio 0.06083 (Ka = 0.0077, Ks = 0.127)

SEC22A ENSG00000121542 (Human)

Gene Details

SEC22 vesicle trafficking protein homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000310521, Human)

Protein Percentage 96.42%
CDS Percentage 95.98%
Ka/Ks Ratio 0.1571 (Ka = 0.0182, Ks = 0.1157)

Sec22a ENSMUSG00000034473 (Mouse)

Gene Details

SEC22 vesicle trafficking protein homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000039568, Mouse)

Protein Percentage 96.09%
CDS Percentage 92.73%
Ka/Ks Ratio 0.06876 (Ka = 0.0187, Ks = 0.2717)

Sec22a ENSRNOG00000043069 (Rat)

Gene Details

SEC22 vesicle trafficking protein homolog A (S. cerevisiae) (Sec22a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061258, Rat)

Protein Percentage 94.46%
CDS Percentage 92.4%
Ka/Ks Ratio 0.1027 (Ka = 0.0266, Ks = 0.2592)

Genome Location

Sequence Coding sequence

Length: 924 bp    Location: 1531661..1624307   Strand: +
Raw sequence   
>XM_004873618.1
ATGTCTGTGATTTTATCTGCCTCAGTTGTTCGTGTCAGAGATGGACTACCACTTTCTGCTTCTACGGATTATGAACAAAACACAGGAATGCAGGAGTGCAGAAAGTATTTTAAAATGCTCTCGAGAAAACTTGCTCAACTTCCTGATAGATGTACACTGAAAACTGGACATTATAACATTAATTTTATTAGCTCTCTGGGAGTGAGCTACATGATGTTGTGCAGTGAAAATTACCCAAATGTTCTCGCCTTCTCTTTCCTGGATGAGCTTCAGAAGGAGTTCATTACTACTTATAATATGATGAAGACAAATACTGCTGTCAGACCATACTGTTTCATTGAATTTGATAACTTCATTCAGAGGACCAAGCAACGATATAATAATCCCAGGTCTCTTTCAACAAAGATAAATCTGTCTGACATGCAGGTGGAAATCAACCTGAGGCCCCCTTATCAAATTCCTATGTGTGAACTGGGGCCAGCCAATGGAGTAACATCTGCATTTTCTGTTGATTATAAAGGTGCTGGTAAGATTTCTTCTGCTCACCAGCGACTGGAACCAGCAACTCTATCAGGGATTGTGGCATTTATCCTTAGTCTTTTATGTGGAGCTCTGAATTTAATTCGAGGGTTTCATGCCATAGAAAGTCTCCTACAGAGTGATGGTGAAGATTTTAATTACATCATTGCATTTTTCCTTGGAACAGCAGCCTGCCTCTACCAGTGTTATTTACTTGTCTACTACACCGGGTGGCGGAATGTCAAATCTTTTTTGACTTTTGGCTTAATCTGTCTATGCAACATGTATCTCTATGAACTGCGCAACCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAGCATTTGTCACACTGCAGATCTGGCTGAGGCAAGCCCAGGGCAAGGCTCCTGATTATGATGTCTGA

Related Sequences

XP_004873675.1 Protein

Sec22a PREDICTED: vesicle-trafficking protein SEC22a [Heterocephalus glaber]

Length: 307 aa      View alignments
>XP_004873675.1
MSVILSASVVRVRDGLPLSASTDYEQNTGMQECRKYFKMLSRKLAQLPDRCTLKTGHYNINFISSLGVSYMMLCSENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQVEINLRPPYQIPMCELGPANGVTSAFSVDYKGAGKISSAHQRLEPATLSGIVAFILSLLCGALNLIRGFHAIESLLQSDGEDFNYIIAFFLGTAACLYQCYLLVYYTGWRNVKSFLTFGLICLCNMYLYELRNLWQLFFHVTVGAFVTLQIWLRQAQGKAPDYDV