Details from NCBI annotation

Gene Symbol Nfix
Gene Name nuclear factor I/X (CCAAT-binding transcription factor), transcript variant X6
Entrez Gene ID 101722219

Database interlinks

Part of NW_004624901.1 (Scaffold)

For more information consult the page for NW_004624901.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NFIX ENSCPOG00000022563 (Guinea pig)

Gene Details

nuclear factor I/X (CCAAT-binding transcription factor)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017513, Guinea pig)

Protein Percentage 99.13%
CDS Percentage 94.26%
Ka/Ks Ratio 0.01527 (Ka = 0.0047, Ks = 0.3058)

NFIX ENSG00000008441 (Human)

Gene Details

nuclear factor I/X (CCAAT-binding transcription factor)

External Links

Gene Match (Ensembl Protein ID: ENSP00000380781, Human)

Protein Percentage 96.3%
CDS Percentage 93.53%
Ka/Ks Ratio 0.0944 (Ka = 0.0243, Ks = 0.2576)

Nfix ENSMUSG00000001911 (Mouse)

Gene Details

nuclear factor I/X

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105386, Mouse)

Protein Percentage 93.32%
CDS Percentage 89.74%
Ka/Ks Ratio 0.13842 (Ka = 0.0492, Ks = 0.3554)

Nfix ENSRNOG00000002983 (Rat)

Gene Details

nuclear factor I/X (CCAAT-binding transcription factor) (Nfix), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034591, Rat)

Protein Percentage 96.3%
CDS Percentage 91.22%
Ka/Ks Ratio 0.06309 (Ka = 0.0248, Ks = 0.3924)

Genome Location

Sequence Coding sequence

Length: 1503 bp    Location: 577933..635362   Strand: +
>XM_004872421.1
ATGGATGAGTTCCACCCGTTCATTGAGGCGCTGCTGCCTCACGTCCGCGCCTTCTCCTATACCTGGTTCAACCTGCAGGCGCGAAAGCGCAAGTACTTCAAGAAGCATGAGAAACGGATGTCGAAGGATGAGGAGCGGGCGGTGAAGGACGAGCTGCTGGGCGAGAAGCCCGAGATCAAGCAGAAGTGGGCATCCCGGCTGCTGGCCAAGCTGCGCAAAGACATCCGGCCCGAGTTCCGCGAGGACTTTGTGCTGACCATCACCGGCAAGAAGCCCCCCTGCTGTGTGCTCTCCAACCCCGACCAGAAAGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGTGGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAGGGGATCCCCCTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCCCAGTGCTCGAACCCCGGCCTGTGCGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGATCTTTATCTGGCTTACTTTGTCCACACTCCGGAATCGGGACAATCAGATAGTTCAAACCAGCAAGGAGATGCGGACATCAAACCACTGCCCAACGGGCACCTCAGTTTCCAGGACTGTTTTGTGACTTCCGGGGTCTGGAACGTGACGGAGCTGGTGAGAGTATCACAGACCCCTGTTGCAACAGCATCAGGGCCCAACTTCTCACTGGCAGACCTGGAGAGTCCCAGCTACTACAACATAAACCAGGTGACCCTGGGGCGGCGGTCCATCACCTCCCCTCCTTCCACCAGCACCACCAAGCGCCCCAAGTCCATCGATGACAGTGAGATGGAGAGCCCCGTGGACGACGTGTTCTATCCTGGGACAGGCCGCTCCCCTGCAGCTGGCAGCAGCCAGTCCAGCGGGTGGCCCAATGACGTGGATGCAGGCCCGGCTTCTCTAAAGAAGTCAGGAAAGCTGGACTTCTGCAGTGCCCTCTCCTCTCAGGGCAGCTCCCCACGCATGGCTTTCACTCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGACCAGGGAGCCCTCGGGCCACAGCCTCTGCCCTGCACTTCCCCTCCACATCCATCATCCAGCAGTCGAGCCCGTACTTTACGCACCCGACCATCCGCTACCACCACCACCACGGTCAGGACTCACTGAAGGAGTTTGTGCAGTTTGTGTGCTCTGATGGCTCGGGCCAGGCCACTGGACAGCCCAACGGTAGCGGCCAGGGCAAAGTCCCGGGGTCATTTTTGCTACCACCGCCGCCTCCAGTGGCCAGACCTGTGCCCCTTCCTATGCCTGATTCCAAATCCACCAGCACTGCCCCAGACGGCGCCGCCTTGACTCCTCCATCACCTTGTAAGTGGACGATGAAACCAAAACCACAACGCCCAGCATCCCTGGCCCATCCAAACCGTCTCCACTGCAAAAGAGAAGCAATTCCCTCCCCACCCAGAGCACCACGGAGCCTCCCGCCCGGATAG

Related Sequences

XP_004872478.1 Protein

Nfix PREDICTED: nuclear factor 1 X-type isoform X6 [Heterocephalus glaber]

Length: 500 aa      View alignments
>XP_004872478.1
MDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQPNGSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPCKWTMKPKPQRPASLAHPNRLHCKREAIPSPPRAPRSLPPG