Sequence details NCBI ID: XM_004872348.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Chchd6
Gene Name coiled-coil-helix-coiled-coil-helix domain containing 6, transcript variant X5
Entrez Gene ID 101697996

Database interlinks

Part of NW_004624900.1 (Scaffold)

For more information consult the page for NW_004624900.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHCHD6 ENSCPOG00000009803 (Guinea pig)

Gene Details

coiled-coil-helix-coiled-coil-helix domain containing 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008800, Guinea pig)

Protein Percentage 81.19%
CDS Percentage 87.61%
Ka/Ks Ratio 0.34816 (Ka = 0.1068, Ks = 0.3067)

CHCHD6 ENSG00000159685 (Human)

Gene Details

coiled-coil-helix-coiled-coil-helix domain containing 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000290913, Human)

Protein Percentage 68.56%
CDS Percentage 78.89%
Ka/Ks Ratio 0.29414 (Ka = 0.191, Ks = 0.6493)

Chchd6 ENSMUSG00000030086 (Mouse)

Gene Details

coiled-coil-helix-coiled-coil-helix domain containing 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032172, Mouse)

Protein Percentage 68.7%
CDS Percentage 75.65%
Ka/Ks Ratio 0.2302 (Ka = 0.2029, Ks = 0.8815)

Chchd6 ENSRNOG00000017115 (Rat)

Gene Details

coiled-coil-helix-coiled-coil-helix domain containing 6 (Chchd6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023122, Rat)

Protein Percentage 66.67%
CDS Percentage 76.17%
Ka/Ks Ratio 0.24386 (Ka = 0.2086, Ks = 0.8556)

Genome Location

Sequence Coding sequence

Length: 693 bp    Location: 2500366..2752134   Strand: +
Raw sequence   
>XM_004872348.1
ATGGGGACCATCGAGAGCAGCGAGGGCCGCAGGGTGTCCTTCGGAATGGACGAGGAGGAGCGGGTCCGGGTGCTGCAGGGCATCCGGCTGTCTGAGAATGTGGTCCAACGCATGAAGGATCCCAGCCCTCTCGCAGAAGGCCAGCAGCCAGCTCCTCCACCTGCTGCTCCGGACTGTGGCTCCACAGCTCCTCAGAAAGAACCCAAACTGCCCACGTCCAAGATTGGTGGTGGCCGGCAGCCCTCGGGAGTGAAGGAGGACCTCAAGAGGTTTAGACAGGAGCAGGCCACAGTGCAGGATGAGCTATTCCGGGTGGTGAGGCGGGAGAGAGAGGCAGCTGCCAAGCACGTGACAGCGGTCCCGCCTGCGGTGGAAGGCAGCACTGACCAGGAGAAGCAGCAGTCGGCCCGGCTGGCCAGGGAGCTGGAAAGCAGAGAGGCAGAGCTCCGACACCACGACACCTTCTACCAGGAGCAGCTGGGGTGCATTGAGAGGAAGAACGTGGAGATGTATAAACTGTCCTCACAGCAATTCCACGAGGCAGCTTCAAAAGCAGAGAACACAATCAAGCCCCGAAGGGTGGAGCCCGTATGCTCAGGGCTGCAGGCCCAGATCCTTCGCTGCTACCGTGACCATGTGCAAGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCCTACCAGCACTGCGGCTGA

Related Sequences

XP_004872405.1 Protein

Chchd6 PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 6, mitochondrial-like isoform X5 [Heterocephalus glaber]

Length: 230 aa      View alignments
>XP_004872405.1
MGTIESSEGRRVSFGMDEEERVRVLQGIRLSENVVQRMKDPSPLAEGQQPAPPPAAPDCGSTAPQKEPKLPTSKIGGGRQPSGVKEDLKRFRQEQATVQDELFRVVRREREAAAKHVTAVPPAVEGSTDQEKQQSARLARELESREAELRHHDTFYQEQLGCIERKNVEMYKLSSQQFHEAASKAENTIKPRRVEPVCSGLQAQILRCYRDHVQEVLLCSDLVKAYQHCG