Details from NCBI annotation

Gene Symbol Hpse
Gene Name heparanase, transcript variant X1
Entrez Gene ID 101721140

Database interlinks

Part of NW_004624900.1 (Scaffold)

For more information consult the page for NW_004624900.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HPSE ENSCPOG00000001853 (Guinea pig)

Gene Details

heparanase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001678, Guinea pig)

Protein Percentage 89.13%
CDS Percentage 89.07%
Ka/Ks Ratio 0.20801 (Ka = 0.0601, Ks = 0.2887)

HPSE ENSG00000173083 (Human)

Gene Details

heparanase

External Links

Gene Match (Ensembl Protein ID: ENSP00000384262, Human)

Protein Percentage 78.98%
CDS Percentage 82.77%
Ka/Ks Ratio 0.28068 (Ka = 0.123, Ks = 0.438)

Hpse ENSMUSG00000035273 (Mouse)

Gene Details

heparanase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044072, Mouse)

Protein Percentage 76.89%
CDS Percentage 78.6%
Ka/Ks Ratio 0.21034 (Ka = 0.1427, Ks = 0.6785)

Hpse ENSRNOG00000002188 (Rat)

Gene Details

heparanase

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002983, Rat)

Protein Percentage 70.91%
CDS Percentage 73.83%
Ka/Ks Ratio 0.22763 (Ka = 0.1993, Ks = 0.8754)

Genome Location

Sequence Coding sequence

Length: 1587 bp    Location: 335605..297707   Strand: -
>XM_004872330.1
ATGCCGCCGCCGCTCCTGCTGTTCCTGCTGCTCCTCCGGCCGATCGGTCCCGCGCAGGCCGGGGACGAAGTGCCGCTGGACTTGGTCACTGAGCGGCCGCTGCGCTCCGTGAGCCCCGCCTTCCTATCTTTCACCATCGACGCCAACCTGGCCACCGACCCGCGCTTTCTCGCCTTCTTGGGTTCCCCCAGGCTTCGGACTTTGGCCAGAGGTTTGGCTCCTGCATACTTGAGATTTGGTGGCACCAAGACAGACTTTCTAATTTTTGATCCTAAGAGAGAACCAACCTTCGAAGAGAGGAGTTGCTGGCGATCTCAAGTCAACCAAGATTTTTGCAAATCCAGGTCCCTCCCTTCCAATGTGGAGAAAAGGCTACGCTTGGAATGGCCTTTTCAGGAGAAGTTGCTACTCAAAGAACAATACCAGAAAAAATTCAACACTACCACCTACTCAAGAAGCTCAGTGGATATGCTGTACTCTTTTGCAAACTGCTCAGGACTGAACTTGATCTTTGGTCTGAACGAGTTGCTGAGAACGGCAGATTCACAGTGGGACAGTTCTAACGCCCAGTTGCTCCTGGACTACTGCTCTTCCAAGGGCTATAATATTTCTTGGGAACTAGGCAATGAACCTAACAGTTTCAGGAAGAAGGCTGGTATTTTCATTGATGGATTGCAGTTAGGAAAAGATTTCATTGAATTGCATAAACTTCTACAAAATTCCTCTTTCAAAAATGCGAAACTCTATGGCCCGGATGTTGGTCAGCCTCGAGGAAAGACGGTTAAGATGCTGCAGAGCTTCCTGCAGACTGGTGGAGAGGTAGTAGATTCGATTACCTGGCACCACTACTATGTGAATGGACGGATTGCTACCAAAGAAGATTTTCTAAACCCTGATGTGCTGGACACTTTCATTGTATCCGTGCAAAAAATTTTGCAGGTGGTGGAGGAGACCAGACCCGGCAAGAAAGTCTGGTTGGGAGAGACGAGCTCTGCGTATGGGGGCGGGGCACGCCTGCTGTCCAATACCTTTGCAGCTGGCTTCATGTGGCTGGATAAACTGGGCCTGTCGGCCCAAATGGGCATAGACGTGGTGATGAGACAAGTGCTCTTCGGTGCTGGAAACTACCACTTAGTGGATCAAAACTTCAAACCTTTACCTGATTACTGGCTCTCTCTTCTGTTCAAGCAACTGGTGGGCACCACTGTGTTCATGGCAAGCGTAAAAGGCTCTGACCATGGCAAGCTTCGTGTGTACCTTCATTGCACCAACAGCAATCATCCAAGGTATAAAGAAGGAGATTTGACTCTGTATGCCTTAAACCTCTACAACGTCACCAAGCACTTGCAGTTACCCCATCACTTATTTAATAAAGAAGTGAACAAGTACCTTCTAAAACCTTCAGGCCGGGATGGATTACTATCCAAATCGGTCCGACTCAATGGTCAAACTCTGAGGATGGTGGATGACCAGACCCTGCCGGCTTTGACAGAAAAATCTCTCCGCCCAGGAAGCTCACTGGGCTTGCCAGCTTTCTCGTATGGGTTTTTTGTGATAAAAAATGCCAAAGTTACTGCTTGTTTATGA

Related Sequences

XP_004872387.1 Protein

Hpse PREDICTED: heparanase isoform X1 [Heterocephalus glaber]

Length: 528 aa      View alignments
>XP_004872387.1
MPPPLLLFLLLLRPIGPAQAGDEVPLDLVTERPLRSVSPAFLSFTIDANLATDPRFLAFLGSPRLRTLARGLAPAYLRFGGTKTDFLIFDPKREPTFEERSCWRSQVNQDFCKSRSLPSNVEKRLRLEWPFQEKLLLKEQYQKKFNTTTYSRSSVDMLYSFANCSGLNLIFGLNELLRTADSQWDSSNAQLLLDYCSSKGYNISWELGNEPNSFRKKAGIFIDGLQLGKDFIELHKLLQNSSFKNAKLYGPDVGQPRGKTVKMLQSFLQTGGEVVDSITWHHYYVNGRIATKEDFLNPDVLDTFIVSVQKILQVVEETRPGKKVWLGETSSAYGGGARLLSNTFAAGFMWLDKLGLSAQMGIDVVMRQVLFGAGNYHLVDQNFKPLPDYWLSLLFKQLVGTTVFMASVKGSDHGKLRVYLHCTNSNHPRYKEGDLTLYALNLYNVTKHLQLPHHLFNKEVNKYLLKPSGRDGLLSKSVRLNGQTLRMVDDQTLPALTEKSLRPGSSLGLPAFSYGFFVIKNAKVTACL