Sequence details NCBI ID: XM_004872026.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Shroom4
Gene Name shroom family member 4
Entrez Gene ID 101706869

Database interlinks

Part of NW_004624893.1 (Scaffold)

For more information consult the page for NW_004624893.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000004777 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004300, Guinea pig)

Protein Percentage 83.73%
CDS Percentage 88.81%
Ka/Ks Ratio 0.42628 (Ka = 0.0911, Ks = 0.2137)

Genome Location

Sequence Coding sequence

Length: 4464 bp    Location: 2659539..2373932   Strand: -
Raw sequence   
>XM_004872026.1
ATGGAGAACCGGCCTGGGTCCTTCCAGTACGTCCCCGTACAGCTGCAAGGGGGGGCGCCCTGGGGCTTCACCCTTAAGGGAGGTCTGGAACACTGTGAGCCGCTCACAGTGTCTAAGATTGAAGATGGAGGCAAGGCAGCTTTGTCCCAGAAGATGAAGACTGGTGATGAGTTGGTGAATATCAATGGCACTCCATTGTATGGCTCCCGCCAAGAGGCCCTCATCCTCATCAAAGGCTCCTTTCGAACCCTCAAGCTGATTGTCAGGAGGAGAAACGCCCCTGTCAGTAGACCGCACTCATGGCATGTGTCCAAGCTGCTGGAGGGATGCCCTGAAGCGGCTACCACCATGCATTTTCCTTCTGAAGCCTTCAGCTTATCTTGGCATTCAGGTTGCAACACAGGTGACGTGTGTGTGCAGTGGTGTCCTCTCTCCCGGCACTGCAGCACTGAGAAAAGCAGCTCCATTGGTAGCATGGAGAGCCTGGAGCAACCAGGCCAAGCCACTTATGAGGGCCACCTCTTGCCAATTGAACAGAACATGTATCCTAACCAGCGTGACTCAGCATACAGCTCCTTTTCAGCCAGCTCAAATGCCTCTGACTGTGCTCTTTCCCTCAGGCCAGAGGAGGCAGCCCCTGCAGAGTGCATCACACAAGGTTTACGGTCAGCTAAGGCTTCCAATGCCAGGGCTAATGGGTCTGAGACCTCAGGAAGTAGCCAGCACACCAACACTGGCAACCTGATCCCCAACTCTCAGATATCATCCCACTCCCAGGAGATCCACCACTCAGGGCCTGCTAAGATAATCAGGGGCCCACCGCAACCTCCAGTGAGGCGGGACAGCCTCCAGGCCTCCAGAGCCCAACTTCTCAATGGAGAACAGGGCAGGGCATCTGAGCCTGCAGACTCCTTGCAACAGGAGAAAACAAGGTTAGACACAGTCCTATCCCTAAGGAACCCTCACAGGTTCTGCTGCCTCAGTGGGCAAGACCATGAGACAAGCGAGGACCATCAGAACTGTGAGCTCAATCAGCCTCCAGAATCTAGCCAGCAAGGCTCTGAACATCTCCTCATGGAGGCTTCTCTCAAAACGTGTGACAAAGCTTCCAGCAGAGATGCCAGCCTGCTCAATGAGACACCAGCAGAGCTAACTGAGGCTCCTTCCTTTGGTAGCCCTCTACACCTTTCAGGACCCACAGGCCATCGCCATAGTGCCCCTGAACAGCTACTGGTATCCCACCTACAGCATGTGCACCTGGATCCCAGGGAATGCAAGGGGATGGAACACCCAGCTGGGCAGGATACACACCAGTGGACTCTGTCCCCTTTGCACAGCAGCCACAAAGGGAAGAAAAGCCCATGTTCCCCTACAGGAGGGTCCCAGGATCAGCCCAGCAGAGAAAGAAAGACCAGGCCAATGCATGATAGGCCTTTGAATTCAGGACTCCAGAGCCAAAGCAGCTCTCCACATGGAGAGCCTGATGGATGCCTGTCAGAAAGAGGTTTCCTGGATCCAAACAGAGCAAGTAGAGCAGGCAGTGACTTGGCCAGTCAGCAGCCCGCTGCCTCTGGTTCTCTCTTTCAACAAACCAAAGACTGTTCCTCAACCACTAAAGAAGCTGGCAGCACAGAAGTAATGGAGGAAGGAGACAGTGACCCCAAGGAGTATAGTCGGATGGGTGGTAGGCGAAGTGGAGGCTCCCGGGGTCGTTCAATTCAAAATCGAAGGAAGAGTGAACGTTTTGCTACCAATCTGCGTAATGAAATTCAGAGGAGGAAGGCCCAGCTTCAAAAGAGCAAGGGTCCCTTGTCAAAGCTGTGTGACACTCAGGAGCCAGTGGAAGAGACCCAGGAGCTTCCAGAAAGTCCTCCACTTCCAACCTCTAATTCACCTCTTCTCTCTTCATATAAAAAATCCCCTAGCCCCAGAGATAAGCTTTTCAACAAAAGCATGATATTCAGGGCTGGGTCTTCAGAGTGTCTTAGTCAACCGCCTGAGAGCCATGAATCTAGGACAGGCTTGGAGGGACAAATAAGCCCTGGCCAGAGGCCTGGCCAGTCCTCTGTGGGCCTGAACACCCGGTGGAAAGCATCTGACCCATCTTCTTCAGACTCTGAGAAAGGACATGCTTACCATGGAGTCCGTAGAGGTCATCGAAGATGGTCTCCAGAGCATCACCTACCGCCACATGTGTCACTAGTCATGGAAGGCCCTTCCAGCCCAAGTGACACCAAGGAATTGAAAGCTTCTATTACCCAAACTGGAGAGGAAGCCATCCTTTTGCCCTTTGCAGACAGAAGAAAGTTCTTTGAAGAGAGCAGCAAATCCTTATCCACATCTCACTTGCCAGGTTTAACTACTCATAGTAATAAGACTTTCACCCAGAGACCAAAACCTATAGACCAAAACTTCCAGTCAGTGAGCTCTAGCTACAGGGAATTGAGGTGCCATCCAGTTGACCAATCATATTATTCTACAGACCAACCATGTCATGCCACAGACCAGTCATATCATCCCATGTCACCCCTTCAGTCAGAAGCTCCCACTTACTCAGAATGCTTTGTAAACAAGGGTCTAGAAAATTCTTTATGCTGCAAGCCACTGCACTGCAGTGATTTTGATTGCCACAGGACCTGCTCTTATTCCTGCAGTGTTCAGGGAGCTATGGTCCATGACCCTTGCGTTTATTGTTCCGGAGAAATCTGCCCTGGCTTGCTAAAGAGAAATATGATGCCAAACTGCTACAACTGCAGGTGCCACCACCACCCATGCATACGGTGTGCAGCTTGCTATCATAATCCTCAGCACAGTACTGTCGAGGAGAGCAGCTTGGCATCTGGCAACACTTGGAAATCCAGGAAGCTGACAGTGCAGGAATTTCCTGAGGACAAATGGAAACCAATAACAGGAAACAGGAAGAGTGGTCAGTCAGGGAGGGAAATGGCTCATTCCAAGGCCAACTTTTCATGGGCAACCTCCTTCCATTCCTGCCTTGAGAACTCAGCACTTGACTTGAGCCACCGAGCAATTTCTTCTCTTGACCTCCTTGGAGACTTCAAACATGGCTTGAAAAAAACAGAAGAAACTTCAGTTTATGAGGAGAATTCTCTTGCCTCCATGCCCCGTCCACTGCGCAGCCGTGCCTTCTCAGAGAGTCACATCAGCTTGGAGCCTCAGAACACCCAGGCTTGGGTGCAGCATCGAAAGGAGCTCTTTACCAAAGGTGACGAAACACAGCCTGATCCTGTTGGAGCCAGGAAGAAGCCCTTTCCTCCTCCTCGCCCCCCTCCTCCCAACTGGGAGAAATACAAACTCTTCCGGGCAGCCCAACAGCAGAAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGGAAGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGATAGAGAAGAGGAAGAAGAGGAGTTGCCACCTAGGTATTTTAGTTCAGAAATCATTGGTCCCTGTGCTTCCAATCCTGAAGAGGTCCTCAAGCAGCCACAACCCTTGAGCCTTGACCACCTGGAGGCCTCAAGGAGAGGTTCACAAAGCTTCTCAGACCAAGAGTCTTTTGCTCTCCATACCAGCGATTTCCTGACTCCAATAAGGAGCCACCTGGGGTCTCAAATTGAGCAGGCACAGCCCTCTTACTATTATGGCATGGGAGGACTTTGGAGGACATCAGAGCAAGAAGCCATTGATTCCCCCAAACAAGAGTTTCAGCACTTCTCACCTCCTCCCGGGGCTCCAGTAATCCCTACCTCTTACTCAGCTTATTACAATATTTCTGTGGCCAAGGCAGAGCTGCTGAACAAGTTGAAAGACCAATCTGAGATGGCAGAGATGGGCCTGGGTGAAGAGGAAGTTGACTATGAACTAGCTCAAAAAAAGATACAGCTTATTGAAAGCATTGGCCGAAAACTTTCTGTCCTAAGGGAGGCCCAACGAGGGCTGCTGGAGGATATCAGTGCCAATTCGGCCCTTGGAGAGGAGGTGGAGACCAATTTAAAGGCGGTCTGCAAACCCAATGAGTTTGACAAATATCGTTTGTTTATTGGGGATCTGGATAAAGTGGTTAATCTGTTGCTGTCACTCTCTGGACGACTGGCTCGGGTGGAGAATGCTCTTAACAGCATCGATTCAGAGGCCAACCAGGAAAAGTTGGTGCTGATAGAGAAGAAGCAGCAGTTGACGGGCCAATTGGCAGATGCCAAGGAGCTGAAGGAGCATGTGGATCGTCGGGAGAAGTTGGTGTTTGACATGGTCTCCCGCTACCTGCCTCAGGACCAGCTCCAAGATTACCAGCACTTTGTCAAGATGAAATCTGCTCTCATCATTGAACAAAGAGAGCTGGATGAAAAGATCAAGCTGGGGGAAGAGCAGCTCAGATGTCTCAGGGAGAGTCTACTCCTGGGGCCCAGCAATTTCTAA

Related Sequences

XP_004872083.1 Protein

Shroom4 PREDICTED: protein Shroom4-like [Heterocephalus glaber]

Length: 1487 aa      
>XP_004872083.1
MENRPGSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMKTGDELVNINGTPLYGSRQEALILIKGSFRTLKLIVRRRNAPVSRPHSWHVSKLLEGCPEAATTMHFPSEAFSLSWHSGCNTGDVCVQWCPLSRHCSTEKSSSIGSMESLEQPGQATYEGHLLPIEQNMYPNQRDSAYSSFSASSNASDCALSLRPEEAAPAECITQGLRSAKASNARANGSETSGSSQHTNTGNLIPNSQISSHSQEIHHSGPAKIIRGPPQPPVRRDSLQASRAQLLNGEQGRASEPADSLQQEKTRLDTVLSLRNPHRFCCLSGQDHETSEDHQNCELNQPPESSQQGSEHLLMEASLKTCDKASSRDASLLNETPAELTEAPSFGSPLHLSGPTGHRHSAPEQLLVSHLQHVHLDPRECKGMEHPAGQDTHQWTLSPLHSSHKGKKSPCSPTGGSQDQPSRERKTRPMHDRPLNSGLQSQSSSPHGEPDGCLSERGFLDPNRASRAGSDLASQQPAASGSLFQQTKDCSSTTKEAGSTEVMEEGDSDPKEYSRMGGRRSGGSRGRSIQNRRKSERFATNLRNEIQRRKAQLQKSKGPLSKLCDTQEPVEETQELPESPPLPTSNSPLLSSYKKSPSPRDKLFNKSMIFRAGSSECLSQPPESHESRTGLEGQISPGQRPGQSSVGLNTRWKASDPSSSDSEKGHAYHGVRRGHRRWSPEHHLPPHVSLVMEGPSSPSDTKELKASITQTGEEAILLPFADRRKFFEESSKSLSTSHLPGLTTHSNKTFTQRPKPIDQNFQSVSSSYRELRCHPVDQSYYSTDQPCHATDQSYHPMSPLQSEAPTYSECFVNKGLENSLCCKPLHCSDFDCHRTCSYSCSVQGAMVHDPCVYCSGEICPGLLKRNMMPNCYNCRCHHHPCIRCAACYHNPQHSTVEESSLASGNTWKSRKLTVQEFPEDKWKPITGNRKSGQSGREMAHSKANFSWATSFHSCLENSALDLSHRAISSLDLLGDFKHGLKKTEETSVYEENSLASMPRPLRSRAFSESHISLEPQNTQAWVQHRKELFTKGDETQPDPVGARKKPFPPPRPPPPNWEKYKLFRAAQQQKQQQQQQQQQQQQQEEEEEEEEEEEEEEEEEEDREEEEEELPPRYFSSEIIGPCASNPEEVLKQPQPLSLDHLEASRRGSQSFSDQESFALHTSDFLTPIRSHLGSQIEQAQPSYYYGMGGLWRTSEQEAIDSPKQEFQHFSPPPGAPVIPTSYSAYYNISVAKAELLNKLKDQSEMAEMGLGEEEVDYELAQKKIQLIESIGRKLSVLREAQRGLLEDISANSALGEEVETNLKAVCKPNEFDKYRLFIGDLDKVVNLLLSLSGRLARVENALNSIDSEANQEKLVLIEKKQQLTGQLADAKELKEHVDRREKLVFDMVSRYLPQDQLQDYQHFVKMKSALIIEQRELDEKIKLGEEQLRCLRESLLLGPSNF