Sequence details NCBI ID: XM_004871876.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Ptprf
Gene Name protein tyrosine phosphatase, receptor type, F, transcript variant X1
Entrez Gene ID 101711685

Database interlinks

Part of NW_004624892.1 (Scaffold)

For more information consult the page for NW_004624892.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 5790 bp    Location: 2825804..2913033   Strand: +
Raw sequence   
>XM_004871876.1
ATGGCCCTGGAGCCAGCCCCAGGGAGGATGATGGTGCCTCTTGTGCCTGCACTCGTGATGCTTGGTTTGGTGGCAGGTGCCCATGGCGACAGCAAACCTGTCTTTGTTAAGGTCCCCGAGGACCAGACAGGGCTTTCAGGAGGGGTGGCATCTTTTGTGTGCCAAGCCACTGGAGAACCTAAGCCACGCATCACATGGATGAAGAAGGGGAAGAAAGTCAGCTCCCAGCGGTTTGAGGTAATTGAATTTGATGACGGGGCAGGGTCAGTGCTGAGGATCCAGCCCTTGCGGGTACAGCGAGACGAAGCCATCTATGAGTGCACAGCCACCAACAGTTTGGGCGAGATCAACACTAGTGCCAAACTCTCAGTGCTTGAAGAGGAGCAGCTCCCGCCTGGGTTTCCATCCATTGACATGGGCCCTCAGCTGAAGGTGGTAGAGAAGGCGCGCACAGCCACCATGCTCTGTGCAGCTGGCGGAAATCCAGATCCCGAGATCTCTTGGTTCAAGGACTTCCTTCCTGTGGATCCTGCCACAAGCAATGGCCGCATCAAACAGCTACGTTCAGGTGGTTCACCAATCAGAGGTGCCTTGCAGATTGAGAGCAGTGAGGAGTCGGACCAAGGCAAGTACGAGTGTGTGGCGACCAACTCAGCAGGCACACGCTACTCGGCCCCCGCGAACCTGTATGTACGAGTGCGCCGTGTGGCTCCTCGTTTCTCCATCCCTCCTAGCAGCCAGGAGGTGATGCCAGGTGGCAGCGTGAACCTGACGTGTGTGGCAGTGGGTGCACCCATGCCCTACGTGAAGTGGATGATGGGAGCTGAGGAGCTCACCAAGGAGGACGAGATGCCAGTTGGCCGCAACGTACTGGAGCTCAACAACGTCGTGCGCTCTGCCAACTACACCTGTGTGGCCATCTCCTCACTGGGCATGATTGAGGCCACAGCCCAGGTCACAGTGAAAGCTCTCCCAAAGCCACCGATTGATCTTATAGTGACAGAGACAACTGCCACCAGCGTCACCCTGACCTGGGACTCTGGGAATTCAGAGCCTGTGTCCTACTACGGCATCCAGTACCGAGCAGCTGGCACAGAGAGCCCCTTCCAGGAGGTGGATGGTGTGGCCACCACCCGCTACAGCATTGGCGGCCTCAGCCCTTTCTCTGAATATGTCTTTCGAGTGCTGGCAGTAAACAGCATCGGCCGAGGGCCACCCAGTGAGGTGGTGCGTGCACACACCGGAGAACAGGCACCCTCCAGCCCTCCACGCCGTGTGCAGGCCCGCATGCTGAGCGCCAGCACCATGCTGGTGCAGTGGGAGCCTCCCGAGGAGCCCAATGGCATGGTGCGGGGATACCGTGTCTATTACACCCCAGACTCTCGTCGCCCTCTGAGTTCCTGGCACAAGCACAACACTGATGCAGGGCTTTTCACCACTGTGGGCAGCCTGCTGCCTAGCATCACCTACAGCCTGCGCGTCCTCGCTTTCACTGCCGTGGGTGACGGCCCACCCAGCCCCACCATCCAGGTCAAGACACAGCAGGGAGTTCCCGCGCAGCCCGTGGACTTCCAGGCTGAGGCTGAGTCAGACACTAGGATCCAGTTGTCATGGCTGCTGCCACCACAGGAGCGGATCGTCAAGTATGAGCTGGTGTACTGGGCAGCAGAGGATGAAGGCCAGCAGCACAAGGTGACCTTCGACCCCACCTCCTCCTACACCCTGGAGGACCTGAAGCCTGACACGCTGTACCGCTTCCAGCTGGCTGCCCGCTCCCACATGGGGGTGGGTGTCCTCACCCCCACCATAGAGGCCCGCACAGCACAGTCTACCCCCTCCGCCCCTCCCCAGAAGGTGACATGTGTGAGCACGGGCTCCACCACGGTCCGGGTAAGTTGGGTCCCACCACCGGCCGACAGCCGCAACGGTGTTATCACCCAATACTCCGTGGCCTATGAGGCAGTGGACGGCGAAGACCACAGGCGGCATGTGGTGGATGGCATCAGCCGCGAGCATTCCAGCTGGGACCTGGTGGGCCTGGAGAAGTGGACCGAGTACCGGGTGTGGGTGCGGGCACACACAGATGTGGGGCCCGGTCCTGAGAGCAGCCCGGTGCTGGTGCGCACCGACGAGGACGTGCCTAGCGGGCCACCACGGAAGGTGGAGGTGGAACCACTGAACTCCACTGCTGTGCATGTCTCCTGGAAGCTGCCTGTCCCCAGCAAGCAACATGGTCACATCCGTGGCTACCAGGTCATCTATGTTCGGTTAGAGAATGGTGAACCCCGAGGCGCACCCATCATTCAGGACGTCATGCTAGCTGAGCCCCAGTGGCAGCCAGAGGAGTCCGAGGACTATGAAACCACCATCAGCGGCCTCACCCCAGAGACCACCTACTCCATTACTGTTGCTGCCTACACTACCAAAGGGGACGGTGCCCGAAGCAAGCCCAAAATTGTTACTACAACAGGAGCAGTCCCAGGCCGGCCCACGATGATCATCAGCACCACAGCCATGAACACTGCACTGCTTCAGTGGCACCCACCCAAGGAGCTGCCCGGAGAGCTGCTGGGCTATCGGCTGCAGTACCGCCGGGCCGATGAGACACAGCTCAACGTTATAGATTTTGGCAAAGATGACCAGCACTTTACAGTCACTGGCCTACACAAAGGGGCCACATATGTCTTCCGGCTTGCTGCCAAGAACCGAGCTGGCCCAGGTGAGGAGTTTGAGAAGGAGATCACGACCCCTGAGGATGTGCCCAGTGGCTTTCCCCAAAACCTACGAGTGACAGGATTGACCACATCTACCACGGAGCTGGCCTGGGACCCACCAGTGCTGGCGGAGAGGAACGGGCATATCGCCAATTACACTGTAGTGTACCGTGACATCAACAGCCAGCAGGAGCTACAGGACGTCACTGCTGACACCCACTTTACACTCTCCGGCCTCAAGCCGGATACCACTTACGACGTCAAGGTCCGCGCATATACCAGCAAAGGTGCCGGCCCACTCAGCCCCAGCATCCAGTCCCGGACCATGCCTGTGGAGCAAGTGTTTGCCAAGAACTTCCGTGTGGCTGCTGCAATGAAGACATCTGTGCTGCTCAGCTGGGAAGTCCCTGACTCCTACAAGTCAGCCGTACCCTTCAAGATTCTGTACAATGGGCAGAGTGTAGAGGTGGACGGGCACTCGATGCACAAGCTGATCTCAGACCTGCAGCCCAACACAGAGTACTCATTTGTGCTCATGAACCGTGGCAACAGTGCAGGGGGCCTACAACACCTCGTGTCCATCCGCACAGCCCCTGACATCCTGCCACACAAGCCACTGCCTGCCTCGGCCTACATAGAGGATGGCCGCTTCACCCTCTCCATGCCCCCTGTGCAGGACCCCTCACTGGTCAGGTGGTTCTACATTGTGGTGGTGCCCATTGACCGTGTGGGTGGGAACATACTGGAACCAAGATGGAGCACACCCGAGGAACTGAAGCTGGATGAGCTTCTGGAGGCCATTGAGCAGCGTGGTGAGTCACAGCAGCGGCGTCGGCGGCAGGCAGACCAGCTAAAGCCATATGTGGCAGCACAAATGGATGTGCTCCCTGAGACCTTCACTCTGGGGGACAAGAAGACCTACCAGGGCTTCTACAACCAGCCACTCTCTTCAGACCTGAGTTACCAGTGCTTTGTACTCGCTTTCCTGAAGGAACCTGTGGATCAGAAGCGCTATGCCACCAGCCCCTACTCGGACGAGATTGTAGTCCAAGTGACACCAGCTCAGCAGCAAGAGGAACCGGAGATGCTGTGGGTGACAGGCCCCGTCCTGGCAGTCATTCTTATCATACTCATTGTCATCGCCATCCTTCTCTTTAAGAGGAAAAGGACCCACTCCCCATCATCAAAAGATGAGCAGTCGATTGGGCTGAAGGACTCCCTGCTGGCCCACTCCTCCGACCCTGTGGAGATGAGGAGGCTCAACTACCAGACTCCAGGTTCCAGTGCCCCCAGTTGCCCGAATATCTCAAGTATGCGAGACCATCCACCCATCCCCATCACCGACCTGGCAGATAACATTGAGCGCCTCAAAGCCAACGATGGCCTCAAGTTCTCCCAGGAATATGAGTCCATTGACCCTGGACAGCAGTTCACTTGGGAGAATTCCAACCTGGAGGTGAACAAGCCTAAAAACCGCTACGCAAATGTCATTGCCTATGACCACTCTCGAGTCATCCTGACCTCCATCGACGGTGTCCCTGGGAGTGACTACATTAACGCCAACTACATCGATGGCTATCGAAAGCAGAATGCCTACATCGCCACCCAGGGCCCACTGCCCGAGACCATGGGAGATTTCTGGCGGATGGTGTGGGAACAGCGCACCGCCATTGTGGTCATGATGACACGGCTGGAGGAGAAGTCCCGGGTAAAGTGTGATCAGTACTGGCCACCCCGTGGCACTGAGACCTATGGCCTCATTCAAGTGACCTTGCTGGACACTGTGGAGCTGGCTACATATACTGTGCGCACCTTTGCGCTCCACAAGAGTGGCTCCAGTGAGAAGCGTGAGCTGCGTCAGTTCCAGTTCATGGCCTGGCCAGACCATGGGGTTCCCGAATACCCAACTCCCATCCTGGCCTTCCTGCGAAGGGTCAAGGCCTGCAACCCACTAGATGCAGGGCCCATGGTGGTGCACTGCAGTGCTGGTGTGGGCCGCACAGGCTGCTTCATCGTTATTGATGCCATGCTGGAGCGTATGAAGCATGAGAAGACAGTCGACATCTACGGCCATGTGACGTGCATGCGATCACAGAGGAACTACATGGTCCAGACAGAAGACCAGTATGTGTTCATCCATGAGGCGCTGCTGGAGGCGGCCACATGTGGACACACCGAGGTGCCTGCCCGCAACCTCTATGCCCACATCCAGAAGCTGGGCCAAGTGCCTCCCGGGGAGAGCGTGACTGCCATGGAGCTGGAGTTCAAGTTGCTGGCCAGCTCCAAGGCGCACACATCTCACTTCATCAGCGCCAACCTGCCCTGCAACAAGTTTAAGAACCGGCTGGTAAACATCATGCCCTATGAACTGACCCGTGTCTGTCTGCAGCCCATCCGTGGTGTGGAGGGCTCCGACTACATCAATGCCAGCTTCCTGGATGGATATAGACAGCAGAAGGCCTACATAGCTACACAGGGGCCTCTGGCAGAGAGCACCGAGGACTTCTGGCGCATGCTATGGGAGCACAATTCTACCATCATCGTCATGCTGACCAAGCTTCGGGAGATGGGCAGGGAGAAGTGTCACCAGTACTGGCCCGCAGGGCGCTCTGCTCGCTACCAGTACTTCGTTGTTGACCCGATGGCTGAATACAACATGCCACAGTATATCCTGCGTGAGTTCAAGGTCACGGATGCTCGGGATGGACAGTCAAGGACAATTCGCCAGTTCCAGTTCACAGACTGGCCTGAGCAGGGCGTACCCAAGACGGGGGAGGGCTTCATTGACTTCATCGGTCAAGTGCACAAGACCAAGGAGCAGTTTGGTCAGGATGGACCCATTACAGTGCACTGCAGCTGTTTTCTGAGCAGTGCTGGTGTGGGCCGCACCGGAGTCTTTATCACTCTGAGCATAGTCTTGGAGCGCATGCGCTACGAGGGCGTGGTCGACATGTTCCAGACTGTGAAGACCCTGCGCACACAGCGTCCTGCAATGGTGCAGACAGAGGACCAGTACCAGCTATGCTACCGTGCAGCCCTGGAGTACCTCGGCAGCTTTGACCACTATGCAACGTAA

Related Sequences

XP_004871933.1 Protein

Ptprf PREDICTED: receptor-type tyrosine-protein phosphatase F isoform X1 [Heterocephalus glaber]

Length: 1929 aa      
>XP_004871933.1
MALEPAPGRMMVPLVPALVMLGLVAGAHGDSKPVFVKVPEDQTGLSGGVASFVCQATGEPKPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSAKLSVLEEEQLPPGFPSIDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGGSPIRGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSSQEVMPGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELNNVVRSANYTCVAISSLGMIEATAQVTVKALPKPPIDLIVTETTATSVTLTWDSGNSEPVSYYGIQYRAAGTESPFQEVDGVATTRYSIGGLSPFSEYVFRVLAVNSIGRGPPSEVVRAHTGEQAPSSPPRRVQARMLSASTMLVQWEPPEEPNGMVRGYRVYYTPDSRRPLSSWHKHNTDAGLFTTVGSLLPSITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPVDFQAEAESDTRIQLSWLLPPQERIVKYELVYWAAEDEGQQHKVTFDPTSSYTLEDLKPDTLYRFQLAARSHMGVGVLTPTIEARTAQSTPSAPPQKVTCVSTGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDHRRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNSTAVHVSWKLPVPSKQHGHIRGYQVIYVRLENGEPRGAPIIQDVMLAEPQWQPEESEDYETTISGLTPETTYSITVAAYTTKGDGARSKPKIVTTTGAVPGRPTMIISTTAMNTALLQWHPPKELPGELLGYRLQYRRADETQLNVIDFGKDDQHFTVTGLHKGATYVFRLAAKNRAGPGEEFEKEITTPEDVPSGFPQNLRVTGLTTSTTELAWDPPVLAERNGHIANYTVVYRDINSQQELQDVTADTHFTLSGLKPDTTYDVKVRAYTSKGAGPLSPSIQSRTMPVEQVFAKNFRVAAAMKTSVLLSWEVPDSYKSAVPFKILYNGQSVEVDGHSMHKLISDLQPNTEYSFVLMNRGNSAGGLQHLVSIRTAPDILPHKPLPASAYIEDGRFTLSMPPVQDPSLVRWFYIVVVPIDRVGGNILEPRWSTPEELKLDELLEAIEQRGESQQRRRRQADQLKPYVAAQMDVLPETFTLGDKKTYQGFYNQPLSSDLSYQCFVLAFLKEPVDQKRYATSPYSDEIVVQVTPAQQQEEPEMLWVTGPVLAVILIILIVIAILLFKRKRTHSPSSKDEQSIGLKDSLLAHSSDPVEMRRLNYQTPGSSAPSCPNISSMRDHPPIPITDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTAIVVMMTRLEEKSRVKCDQYWPPRGTETYGLIQVTLLDTVELATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSHFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAGRSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSCFLSSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT