Details from NCBI annotation

Gene Symbol S100a1
Gene Name S100 calcium binding protein A1, transcript variant X2
Entrez Gene ID 101717882

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

S100A1 ENSCPOG00000005826 (Guinea pig)

Gene Details

S100 calcium binding protein A1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005255, Guinea pig)

Protein Percentage 96.81%
CDS Percentage 94.33%
Ka/Ks Ratio 0.04578 (Ka = 0.0141, Ks = 0.3083)

S100A1 ENSG00000160678 (Human)

Gene Details

S100 calcium binding protein A1

External Links

Gene Match (Ensembl Protein ID: ENSP00000292169, Human)

Protein Percentage 95.74%
CDS Percentage 92.91%
Ka/Ks Ratio 0.03094 (Ka = 0.0176, Ks = 0.5673)

S100a1 ENSMUSG00000044080 (Mouse)

Gene Details

S100 calcium binding protein A1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000058237, Mouse)

Protein Percentage 91.49%
CDS Percentage 86.17%
Ka/Ks Ratio 0.04789 (Ka = 0.0399, Ks = 0.8336)

S100a1 ENSRNOG00000012410 (Rat)

Gene Details

S100 calcium binding protein A1 (S100a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017000, Rat)

Protein Percentage 91.49%
CDS Percentage 87.59%
Ka/Ks Ratio 0.0463 (Ka = 0.0392, Ks = 0.8471)

Genome Location

Sequence Coding sequence

Length: 285 bp    Location: 3516856..3512288   Strand: -
>XM_004871435.1
ATGGGCTCTGAGCTGGAGACTGCGATGGAGACCCTCATCAACGTGTTCCACACCCACTCCAGCAAGGAGGGGGACAAGTACAAGCTGAGCAAGAAGGAGCTGAAGGAGCTGCTGCAAACTGAGCTCTCTGGCTTCCTGGACGCCCAGAAGGATGCAGATGCCGTGGACAAGGTGATGAAGGAGCTAGACGAGAATGGAGACGGAGAGGTCGACTTCCAGGAGTACGTGGTGCTGGTGGCTGCTCTCACCGTGGCCTGTAGCAACTTCTTCTGGGAGAACAGCTGA

Related Sequences

XP_004871492.1 Protein

S100a1 PREDICTED: protein S100-A1 isoform X2 [Heterocephalus glaber]

Length: 94 aa      View alignments
>XP_004871492.1
MGSELETAMETLINVFHTHSSKEGDKYKLSKKELKELLQTELSGFLDAQKDADAVDKVMKELDENGDGEVDFQEYVVLVAALTVACSNFFWENS