Details from NCBI annotation

Gene Symbol Tpm3
Gene Name tropomyosin 3, transcript variant X5
Entrez Gene ID 101701017

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TPM3 ENSCPOG00000007279 (Guinea pig)

Gene Details

tropomyosin 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006558, Guinea pig)

Protein Percentage 93.66%
CDS Percentage 90.14%
Ka/Ks Ratio 0.10652 (Ka = 0.0472, Ks = 0.4433)

TPM3 ENSG00000143549 (Human)

Gene Details

tropomyosin 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000357516, Human)

Protein Percentage 93.66%
CDS Percentage 89.2%
Ka/Ks Ratio 0.09387 (Ka = 0.0476, Ks = 0.5067)

Tpm3 ENSMUSG00000027940 (Mouse)

Gene Details

tropomyosin 3, gamma

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000062920, Mouse)

Protein Percentage 87.28%
CDS Percentage 82.8%
Ka/Ks Ratio 0.08747 (Ka = 0.0917, Ks = 1.0484)

Genome Location

Sequence Coding sequence

Length: 855 bp    Location: 3109451..3137461   Strand: +
>XM_004871377.1
ATGATGGAGGCCATCAAGAAGAAGATGCAGATGCTGAAGCTGGACAAGGAGAACGCTCTCGATAGGGCAGAGCAAGCTGAGGCTGAGCAGAAACAGGCAGAAGAAAGAAGTAAACAGCTGGAAGATGAACTAGCAGCCATGCAGAAGAAGCTGAAAGGGACAGAAGATGAGCTGGACAAATACTCTGAAGCTTTGAAGGATGCCCAGGAGAAGCTGGAGCTTGCAGAGAAGAAAGCAGCTGATGCGGAGGCGGAGGTGGCCTCCTTGAACCGCAGGATCCAGCTGGTTGAGGAGGAGCTGGACCGTGCACAGGAGCGCCTGGCCACTGCCCTGCAGAAGCTGGAGGAAGCTGAGAAGGCTGCCGATGAGAGTGAGAGAGGCATGAAGGTTATTGAAAACCGGGCCCTGAAAGATGAAGAAAAGATGGAACTCCAGGAAATCCAACTTAAAGAAGCTAAACATATTGCAGAAGAGGCGGATAGGAAGTATGAAGAGGTGGCTCGAAAGTTGGTGATTATTGAAGGAGACTTGGAACGCACCGAGGAAAGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGAGCTGAAGAATGTCACCAACAACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAAGAAGACAAATATGAGGAAGAGATAAAGATTCTGACTGATAAACTCAAGGAGGCAGAGACGCGTGCTGAGTTTGCTGAGAGATCAGTAGCCAAACTGGAAAAGACAATTGATGACTTGGAAGAGCGTCTCTACAGCCAGCTTGAGCGAAACCGCCTGCTTTCTAATGAGCTGAAGCTAACGCTGCATGATCTGTGTGACTGA

Related Sequences

XP_004871434.1 Protein

Tpm3 PREDICTED: tropomyosin alpha-3 chain isoform X5 [Heterocephalus glaber]

Length: 284 aa     
>XP_004871434.1
MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRLLSNELKLTLHDLCD