Sequence details NCBI ID: XM_004871336.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Kcnn3
Gene Name potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, transcript variant X1
Entrez Gene ID 101721013

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

KCNN3 ENSCPOG00000015718 (Guinea pig)

Gene Details

potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014172, Guinea pig)

Protein Percentage 97.36%
CDS Percentage 93.6%
Ka/Ks Ratio 0.03271 (Ka = 0.0118, Ks = 0.3618)

KCNN3 ENSG00000143603 (Human)

Gene Details

potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000271915, Human)

Protein Percentage 95.4%
CDS Percentage 91.49%
Ka/Ks Ratio 0.04628 (Ka = 0.0224, Ks = 0.4848)

Kcnn3 ENSMUSG00000000794 (Mouse)

Gene Details

potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000000811, Mouse)

Protein Percentage 95.52%
CDS Percentage 89.59%
Ka/Ks Ratio 0.03377 (Ka = 0.0214, Ks = 0.6325)

Kcnn3 ENSRNOG00000020706 (Rat)

Gene Details

potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 (Kcnn3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028117, Rat)

Protein Percentage 95.93%
CDS Percentage 89.31%
Ka/Ks Ratio 0.02062 (Ka = 0.0172, Ks = 0.835)

Genome Location

Sequence Coding sequence

Length: 2154 bp    Location: 2597649..2732634   Strand: +
Raw sequence   
>XM_004871336.1
ATGGACACTTCTGGGCACTTCCATGACTCCGGGGTGGGGGACCTGGACGAAGACCCCAAGTGCCCCTGTCCGTCCTCTGGGGATGAGCAGCAGCCGACGCCGCAAGCGCAGCAGGCGCCCCCGCCGCCGGCGCCCCCAGCTGCCCCCCAGCAGCCCCCGGGACCCCCGCTGCAGCCTCAGCCTCCGCAGCCAGCGCCGCCGCCGCATCCCCTGCCTCAGCTCGCCCCGCTCCAGAGCCAGCTGGTCCACCCCGGCCTGCTGCACTCCTCGCCCACCGCGTTCAGGGGCCCCCCTTCGGCCAACTCCACCGCCGCCCTCCACCCCTCCTCCAGGCAAGGCAGCCAGCTCAACCTCAATGACCACTTGCTGGGCCACTCTCCAAGCTCCACAGCCACAAGTGGGCCCGGTGGAGGCAGCCGGCACCGGCAGGCCAGCCCCCTGGTGCACCGGCGGGACAGCAACCCCTTCACCGAGATCGCCATGAGTTCCTGCAAGTACAGCGGTGGGGTCATGAAGCCCCTCAGCCGCCTCAGCGCCTCCCGCAGGAACCTCATCGAGGCCGAGCCCGAGGGCCAGCCCCTGCAGCTCTTCAGTCCCAGCAACCCCCCGGAGATCGTCATCTCCTCCCGGGAGGACAACCATGCCCACCAGACCCTGCTCCATCACCCCAATGCCACCCACAACCACCGGCACGCCGGCACCACTGCCAGCAGCACCACCTTCCCCAAAGCCAACAAGCGGAAGAACCAAAACATTGGCTATAAGCTAGGACACAGGAGGGCCCTGTTTGAAAAGAGAAAGCGACTCAGTGACTATGCTCTGATTTTTGGGATGTTTGGAATTGTTGTTATGGTGATAGAAACCGAGCTGTCTTGGGGTTTGTACTCAAAGGACTCCATGTTTTCGCTGGCCCTGAAATGCCTCATCAGCCTCTCCACCATCATCCTGCTGGGACTGATCATCGCCTATCACACGCGGGAGGTCCAGCTCTTCGTGATCGACAATGGCGCGGACGACTGGCGGATAGCCATGACCTACGAGCGCATCCTCTACATCAGCCTGGAGATGCTGGTGTGCGCCATCCACCCCATCCCGGGCGAGTACAAGTTCTTCTGGACGGCGCGCCTGGCCTTCTCGTACGCGCCGTCGCGCACGGAGGCGGACGTGGACATCATCCTGTCCATCCCCATGTTCCTGCGCCTGTACCTGATCGCGCGCGTCATGCTGCTGCACAGCAAGCTCTTCACCGACGCCTCCTCGCGCAGCATCGGGGCGCTCAACAAGATCACCTTCAACACGCGCTTCGTCATGAAGACGCTCATGACCATCTGCCCCGGCACCGTGCTGCTGGTCTTCAGCATCTCGCTGTGGATCATCGCCGCCTGGACTGTGCGCGTGTGTGAAAGGTACCACGACCAGCAGGACGTAACCAGTAACTTTCTGGGTGCCATGTGGCTCATCTCCATCACATTCCTTTCCATCGGTTACGGGGATATGGTGCCCCACACATACTGTGGGAAAGGTGTCTGCCTTCTCACTGGCATCATGGGTGCAGGCTGCACTGCCCTTGTGGTGGCTGTGGTGGCCCGGAAGCTGGAACTCACCAAAGCGGAGAAGCATGTTCACAACTTCATGATGGACACGCAGCTCACCAAACGGATCAAGAACGCTGCAGCCAATGTCCTCCGGGAAACGTGGCTCATCTACAAACACACAAAGCTGCTGAAGAAGATGGACCACGCCAAAGTCAGGAAGCACCAGCGGAAGTTCCTGCAGGCTATCCACCAGCTGAGGAGTGTGAAGATGGAGCAGAGGAAGCTGAGCGACCAGGCCAACACTCTGGTGGATCTTTCCAAGATGCAGAACGTCGTGTATGACTTAATCACGGAACTCAACGATCGCAGCGAGGACCTGGAGAAGCAGATCGGCAGCCTGGAGGCCAAGCTGGAGCACCTCTCTGCCAGCTTCAACTCCCTGCCCCTGCTCCTCGCGGACACGCTTCGCCAGCAGCAGCAGCAGCTCCTGACCGCCCTCCTGGAGGCCCGCGCCGTGAGCGTGGCGGTGGGGACCACCCCCGCCCCGCTGTCCGACAGCCCGATCGGGGTCAGCTCCACCTCCTTCCCGACCCCGTACACAAGTTCAAGCAGTTGCTAA

Related Sequences

XP_004871393.1 Protein

Kcnn3 PREDICTED: small conductance calcium-activated potassium channel protein 3 isoform X1 [Heterocephalus glaber]

Length: 717 aa      View alignments
>XP_004871393.1
MDTSGHFHDSGVGDLDEDPKCPCPSSGDEQQPTPQAQQAPPPPAPPAAPQQPPGPPLQPQPPQPAPPPHPLPQLAPLQSQLVHPGLLHSSPTAFRGPPSANSTAALHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSRLSASRRNLIEAEPEGQPLQLFSPSNPPEIVISSREDNHAHQTLLHHPNATHNHRHAGTTASSTTFPKANKRKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGLYSKDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYAPSRTEADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKITFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKMDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVVYDLITELNDRSEDLEKQIGSLEAKLEHLSASFNSLPLLLADTLRQQQQQLLTALLEARAVSVAVGTTPAPLSDSPIGVSSTSFPTPYTSSSSC