Details from NCBI annotation

Gene Symbol Trim46
Gene Name tripartite motif containing 46, transcript variant X5
Entrez Gene ID 101706641

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM46 ENSCPOG00000022179 (Guinea pig)

Gene Details

tripartite motif containing 46

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020985, Guinea pig)

Protein Percentage 95.45%
CDS Percentage 93.3%
Ka/Ks Ratio 0.08957 (Ka = 0.0236, Ks = 0.2636)

TRIM46 ENSG00000163462 (Human)

Gene Details

tripartite motif containing 46

External Links

Gene Match (Ensembl Protein ID: ENSP00000334657, Human)

Protein Percentage 92.98%
CDS Percentage 89.09%
Ka/Ks Ratio 0.07838 (Ka = 0.0394, Ks = 0.503)

Trim46 ENSMUSG00000042766 (Mouse)

Gene Details

tripartite motif-containing 46

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036053, Mouse)

Protein Percentage 92.24%
CDS Percentage 86.01%
Ka/Ks Ratio 0.0666 (Ka = 0.0458, Ks = 0.6877)

Trim46 ENSRNOG00000027903 (Rat)

Gene Details

tripartite motif-containing 46

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034833, Rat)

Protein Percentage 81.08%
CDS Percentage 77.86%
Ka/Ks Ratio 0.1656 (Ka = 0.1467, Ks = 0.8859)

Genome Location

Sequence Coding sequence

Length: 1626 bp    Location: 2354288..2345211   Strand: -
>XM_004871293.1
ATGGCTGCGAGGAGAGGGACCAAGACCAGCATGAGGAACATGGAGAAGGAGCTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACCCACAATGTGTGCCAGGCCTGTGCCCGGGAGGTGCTGGGCCAACAGGGCTACCTAGGCCATGGTGGGGACCCCAGCTCCGAGCCCACCTCTCCTGCCTCCACCCCTTCCACCCGCAGCCCCCGCCTCTCCCGCAGAACTCTCCCCAAGCCAGATCGCCTGGACCGGCTGCTGAAGTCAGGCTTCGGAACGTACCCTGGGCGGAAGCGAGGTGCATTGCACCCCCAGGTGGTCATGTTCCCCTGCCCAGCCTGCCAGGGTGACGTGGAGCTGGGGGAGAGGGGCCTGGCCGGGCTCTTCCGGAACCTGACCCTAGAGCGTGTGGTGGAGCGGTACCGCCAGAGTGTGAGCGTGGGAGGCGCCATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGAAGCCACCAAGGGCTGCACAGAGTGTCGAGCCACCTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACACAGAAGGCTCAGCATGAGCCCACCCTGCCCACCCTCTCCTTCCGCCCCAAGGGCCTGATGTGCCCCGACCACAAGGAAGAGGTGACTCATTACTGCAAGACCTGTCAACGGCTGGTATGCCAGCTCTGCCGGGTGCGGCGTACCCACAGCGGGCACAAGATCACACCAGTGCTCAGCGCCTACCAGGCACTCAAGGACAAGCTGACAAAGAGCTTGACATACATCCTGGGAAACCAGGACACGGTGCAGACCCAGATCTGTGAGCTGGAGGAGACCGTCCGGCACACAGAGGTGAGTGGTCAGCAAGCGAAGGAGGAGGTGTCCCAGCTGGTGCGGGGCCTGGGGGCTGTGCTGGAAGAGAAGCGGGCCTCACTGCTCCAGGCCATCGAAGAATGCCAGCAGGAGCGGCTGGCCCGACTCAGCACCCAGCTGCAGGAGCACCAGAGCCTGCTGGATGGCTCGGGTCTGGTGGGCTACGCCCAGGAAGTGCTGAAGGAAACAGACCAGCCTTGCTTTGTGCAAGCGGCTAAGCAGCTGCACAACAGGATTGCCCGAGCTACTGAGGCCCTCCAGACCTTCCGGCCGGCCGCCAGCTCCTCCTTCCGCCATTGCCAGCTGGACGTGGGGCGCGAGATGAGGCTGCTGACAGAGCTTAGCTTCCTACAAGTGCCTGAGGCTCCTGTCATTGACACCCAGCGCACCTTTGCCTACGATCAGATCTTCCTGTGCTGGCGACTGCCTCCCCACTCGCCACCTGCCTGGCACTACACCGTCGAGTTCCGGCGCACAGACGTGCCTGCCCAGCAGGGCCCCACGCGCTGGCAGCGGCGGGAGGAGGTGAGGGGCACCAGCGCCCTTCTCGAGAACCCCGACACAGGCTCTGTGTATGTGCTGCGAGTCCGGGGCTGCAACAAGGCTGGCTACGGGGAGTACAGCGAGGACGTTCACCTGCACACGCCCCCAGCGCCCGGTACGACCCAGACAGTGGGCATGACAGCGGCGCCGAGGATGCCACAGTGGAGGCGGCGCCGCCCTTTGCTTTCCTGA

Related Sequences

XP_004871350.1 Protein

Trim46 PREDICTED: tripartite motif-containing protein 46 isoform X5 [Heterocephalus glaber]

Length: 541 aa      View alignments
>XP_004871350.1
MAARRGTKTSMRNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREVLGQQGYLGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGALHPQVVMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEETVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSTQLQEHQSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMRLLTELSFLQVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQQGPTRWQRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPGTTQTVGMTAAPRMPQWRRRRPLLS