Sequence details NCBI ID: XM_004871278.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Mtx1
Gene Name metaxin 1, transcript variant X1
Entrez Gene ID 101703494

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MTX1 ENSCPOG00000024733 (Guinea pig)

Gene Details

metaxin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018221, Guinea pig)

Protein Percentage 95.57%
CDS Percentage 92.93%
Ka/Ks Ratio 0.09132 (Ka = 0.0215, Ks = 0.2353)

MTX1 ENSG00000173171 (Human)

Gene Details

metaxin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000357360, Human)

Protein Percentage 92.11%
CDS Percentage 89.91%
Ka/Ks Ratio 0.11208 (Ka = 0.0397, Ks = 0.3546)

Mtx1 ENSMUSG00000064068 (Mouse)

Gene Details

metaxin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073261, Mouse)

Protein Percentage 88.96%
CDS Percentage 86.86%
Ka/Ks Ratio 0.12537 (Ka = 0.0595, Ks = 0.4746)

Mtx1 ENSRNOG00000042977 (Rat)

Gene Details

Metaxin 1 (Mtx1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061267, Rat)

Protein Percentage 85.37%
CDS Percentage 85.6%
Ka/Ks Ratio 0.19337 (Ka = 0.0855, Ks = 0.4421)

Genome Location

Sequence Coding sequence

Length: 1029 bp    Location: 2326211..2321329   Strand: -
Raw sequence   
>XM_004871278.1
ATGGCGGCGCCCATGGAGCTGTTCTGCTGGTCGGGGGGCTGGGGGCTGCCTTCAGTGGACCTGGATAGCCTGGCCGTGCTGACGTATGCCAGATTTACTGGTGCTCCACTCAAGGTACACAAGATCACCAACCCCTGGCGAAGCCCTTCAGGAACTTTGCCTGCTCTTCGGACCAGCCATGGAGAAGTCATCTCGGTACCACACAGGATCATCACCCACCTTCGAAAAGAGAAGTACAATGCAGACTATGATCTGTCAGCCCGACAAGGGGCAGACACCCTGGCCTTCATGTCTTTGCTGGAGGAAAAACTGCTCCCAGTGCTGATCCATACTTTTTGGATAGATACCAAGAACTATGTGGAAGTGACCCGGAAGTGGTATGCAGAAGCTATGCCCTTTCCCCTCAACTTCTTCCTCCCCGGCCGCATGCAAAGGCAGCACATGGAGCGGCTGCAGCTGCTGTGTGGGGAGCACAGGCCTGAGAATGAGGAAGAACTGGAAAAGGAGCTGTACCAAGAGGCTGGGGAGTGCCTGACCCTTCTCTCTCAGCGCCTGGGCTCCCAGAAGTTCTTCTTCGGAGATGCCCCTGCTTCCCTGGATGCCTTCGTCTTTAGCTACCTGGCCCTGCTGCTGCAGGCGAAGCTGCCCAGTGGGAAGCTGCCGGCCCACCTACGGGGTCTGCACAACCTCTGCACCTACTGCACCCACATCCTCGGCATCTACTTCCCCTGGGATGGAGGTAAGGGGCCGGGGGCCGCCCTAGGGGCAGGGGCCGGGATCCAGGAACTAGCTCCTCTTCCTTCCTTGCCCTCAGCTGAGGTGCCACCCCCACGACAGCCACCAGCAGGCCCAGAGACTGAGGAGGACCCGTACCCGCGCCGGAACCAGATCCTGTCTGTGCTGGCAGGGCTGGCGGCCATGGTGGGCTACGCCTTGCTCAGTGGCATCATCTCCATCCAGCGGGCGGCACCCGCCCGGGACCCCAGCATCCGGGCCCTGGGCATGGCTGAAGAGGATGAAGAGCAGTGA

Related Sequences

XP_004871335.1 Protein

Mtx1 PREDICTED: metaxin-1 isoform X1 [Heterocephalus glaber]

Length: 342 aa      View alignments
>XP_004871335.1
MAAPMELFCWSGGWGLPSVDLDSLAVLTYARFTGAPLKVHKITNPWRSPSGTLPALRTSHGEVISVPHRIITHLRKEKYNADYDLSARQGADTLAFMSLLEEKLLPVLIHTFWIDTKNYVEVTRKWYAEAMPFPLNFFLPGRMQRQHMERLQLLCGEHRPENEEELEKELYQEAGECLTLLSQRLGSQKFFFGDAPASLDAFVFSYLALLLQAKLPSGKLPAHLRGLHNLCTYCTHILGIYFPWDGGKGPGAALGAGAGIQELAPLPSLPSAEVPPPRQPPAGPETEEDPYPRRNQILSVLAGLAAMVGYALLSGIISIQRAAPARDPSIRALGMAEEDEEQ