Sequence details NCBI ID: XM_004871221.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Apoa1bp
Gene Name apolipoprotein A-I binding protein, transcript variant X2
Entrez Gene ID 101716392

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APOA1BP ENSCPOG00000024878 (Guinea pig)

Gene Details

apolipoprotein A-I binding protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017860, Guinea pig)

Protein Percentage 71.81%
CDS Percentage 76.21%
Ka/Ks Ratio 0.53474 (Ka = 0.2495, Ks = 0.4666)

APOA1BP ENSG00000163382 (Human)

Gene Details

apolipoprotein A-I binding protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000357218, Human)

Protein Percentage 87.25%
CDS Percentage 86.99%
Ka/Ks Ratio 0.13351 (Ka = 0.0646, Ks = 0.4836)

Apoa1bp ENSMUSG00000028070 (Mouse)

Gene Details

apolipoprotein A-I binding protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029708, Mouse)

Protein Percentage 87.35%
CDS Percentage 83.4%
Ka/Ks Ratio 0.09877 (Ka = 0.0733, Ks = 0.7421)

APOA1BP ENSRNOG00000019201 (Rat)

Gene Details

NAD(P)H-hydrate epimerase

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025986, Rat)

Protein Percentage 87.76%
CDS Percentage 84.08%
Ka/Ks Ratio 0.12254 (Ka = 0.0763, Ks = 0.623)

Genome Location

Sequence Coding sequence

Length: 756 bp    Location: 1780906..1783290   Strand: +
Raw sequence   
>XM_004871221.1
ATGTCCGGGCTGCGGGCCCTCCTGGGGCTCGGGCTGCTGGTCGCGGGCTCGCGCCTGCCGCGCGCACGAAGCCAGGCAGACGCGTGCCGCGCAGGACTCCCGGGCTGGGGAGCGCAGCTGCTGAGCTCGGCCGGCCGTGGGGACCCGGAGGCCATGGCGGGCAGGGCGGTGAAATACCTGAGCCAGGAGGAGGCGCAGGCCTTGGACCTGGAGCTATTTAACGAGTACCAGTTCAGCGTGGACCAACTCATGGAGCTGGCCGGCCTGAGCTGCGCCACGGCCATCGCCAAGGGATACCAACCAACCGTCTATTACCCCAAGAGACCCAACAAACCACTCTTTACCGCACTGGTGACTCAATGTCAGAAAATGGACATCCCTTTCCTGGGTGAAATGCCTTCGGAGCCCATGATGATCGATGAGCTGTATGAGCTGGTGGTAGATGCCATCTTTGGCTTCAGCTTCAAAGGCGATGTCCGCGAGCCATTCCGCAGCATCCTGAGCATCCTGAATGAACTCACTGTGCCCATTGCCAGCATCGACATTCCCTCAGGATGGGATGTGGAGAAAGGAAACTCTGGAGGGATCCAGCCAGACATGCTCATCTCCTTGACGGCACCCAAAAAGTCTGCAACCCAGTTTACCGGTCGCTACCATTACTTGGGGGGTCGTTTTGTACCACCTGCCCTGGAAAAGAAGTACCAGCTGAACCTGCCACCCTACCCTGACACTGAGTGTGTCTATCGTCTGCAGTGA

Related Sequences

XP_004871278.1 Protein

Apoa1bp PREDICTED: NAD(P)H-hydrate epimerase isoform X2 [Heterocephalus glaber]

Length: 251 aa      View alignments
>XP_004871278.1
MSGLRALLGLGLLVAGSRLPRARSQADACRAGLPGWGAQLLSSAGRGDPEAMAGRAVKYLSQEEAQALDLELFNEYQFSVDQLMELAGLSCATAIAKGYQPTVYYPKRPNKPLFTALVTQCQKMDIPFLGEMPSEPMMIDELYELVVDAIFGFSFKGDVREPFRSILSILNELTVPIASIDIPSGWDVEKGNSGGIQPDMLISLTAPKKSATQFTGRYHYLGGRFVPPALEKKYQLNLPPYPDTECVYRLQ