Sequence details NCBI ID: XM_004871186.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sema4a
Gene Name sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A, transcript variant X4
Entrez Gene ID 101705664

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEMA4A ENSCPOG00000015694 (Guinea pig)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014152, Guinea pig)

Protein Percentage 85.55%
CDS Percentage 87.43%
Ka/Ks Ratio 0.18388 (Ka = 0.0769, Ks = 0.4182)

SEMA4A ENSG00000196189 (Human)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A

External Links

Gene Match (Ensembl Protein ID: ENSP00000357268, Human)

Protein Percentage 84.49%
CDS Percentage 84.58%
Ka/Ks Ratio 0.13613 (Ka = 0.087, Ks = 0.6394)

Sema4a ENSMUSG00000028064 (Mouse)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029700, Mouse)

Protein Percentage 81.05%
CDS Percentage 81.97%
Ka/Ks Ratio 0.14116 (Ka = 0.1101, Ks = 0.7801)

Sema4a ENSRNOG00000019737 (Rat)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A (Sema4a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053704, Rat)

Protein Percentage 80.79%
CDS Percentage 81.18%
Ka/Ks Ratio 0.12999 (Ka = 0.1127, Ks = 0.8673)

Genome Location

Sequence Coding sequence

Length: 2286 bp    Location: 1474091..1493621   Strand: +
Raw sequence   
>XM_004871186.1
ATGGCCCTCCCAGCCCTAGGCCTGGACCCCTGGAGCCTCCTGGGCCTTTTCTTCTTCCAACTGCTCTTGCTGCTGCTGCCGCCGCTGACTGCTGGGGCTGGTGGGCAGGGGCCCATGCCCAGGGTCAGGTACAGTGCAGGGGACCCACGCAGGGCCCTGAGCCTCTTCCACCAGAAAGGCCTCCAAGACTTCGACACCCTGCTCCTGAGCGGTGGCGGGAACACTCTATACGTGGGTGTCCGGGAGGCCGTTCTGGCCTTGGATGTCCAGCACCCCGGAGCCCCACAGCTGAGGAGCATGATACCCTGGCCGGCCAGCGACAGGAAGAAGCACGAGTGTGCCCTGAAGAAGAAGAGCAGCGAGACGCAGTGCTTCAACTTCATCCGAGTCCTGGTCTCCTTCAATGCCACCCATCTCTACGCCTGTGGCACCTTTGCCTTCAGCCCTGCCTGCACCTTCATCGAATTCCGAGATTCCCAACTGTCACCCATATCGGAGAAAACGGTGATGGAGGGGAAAGGTCAGAGCCCCTTTGACCCTGCTCACAAGCACACTGCCATCTTGGTGGATGGGATGCTCTACTCAGGCACCATGAACAACTTCCTGGGCAGCGAGCCCATCCTGATGCGCACGCTGGGCCCCCGGCCTGTCCTCAAGACGGACACTTTCCTCCGCTGGCTGCAGTCGGACGCCTCCTTCGTAGCCGCCGTGCCCTCGACCCAGGTCGTCTACTTCTTCTTCGAGGAGACAGCCAGCGAGTTCGACTTCTTCGAGAAGCTCCGCACCTCCCGCGTGGCTCAAGTCTGCAAGAACGACATGGGCGGAGAGAAGCTGCTGCAGAAGAAGTGGACCACCTTCCTCAAGGCTCAGCTGCTCTGCACCCAGCCCGGGCAGCTGCCCTTCAACGTCATCCGCCACGCGGTGCTGCTGCCCGCCGAATCGGCCGCCGAGGCCCGCGTCTACGCGGTCTTCACCTCCCAGTGGCAGGTCGGTGGGACCAGGAGTTCCGCAGTTTGCTCCTTCTCTCTCTCAGACATCGAGAATGTCTTTAAGGGGCAGTTCAAGGAGTTGAACAAAGAAACTTCACGCTGGATGACTTATGTGAACCCTGAGACAAGCCCGCGGCCAGGCAGTTGTGCGGTGGGCCCCTCCTCTGATAAGGCCTTGACCTTCATGAAGGACCATTTCCTGATGGATGAGCAGGTGGTGGGGACACCCCTGCTGGTGAAATCCGATGTGGAGTACACTCGGCTCACGGTGGAGACAGCCCGGGGCCTGGATGGGCACAGCTATGTGGTCATGTACCTGGGCACCTCCACCGGCTTCCTGCACAAGGCCGTGGTGAGCCAGGCCAGCCGTGCTTACCTGGTGGAGGAGATCCAGCTGTTCCCTGAGCCCGAGCCCATTCGCAACCTGCAGCTGGCCCCCAGCCAGGGTGCAGTGTTTGCAGGCTTCTCTGGAGGCGTCTGGAGGGTGCCCCGGGCCAACTGCAGTGTCTACGAGAGCTGTGTTGACTGTGTCCTTGCCCGGGACCCCCACTGCGCCTGGGACCCCGAGTCGAGAGTCTGCTCCCTGCTGTGGACCCTGGACCTAATGTCCTGGAAGCAGGACATGGAGCGGGGGAACCCGGAATGGGCCTGTGCCAAGGGCCCACTGGGCAGGAGCCACCGGCCTCAGAGCCGCCCCCAGATCATTAAAGAAGTCCTCGTGGTCCCCAACTCCATCCTGGAGCTCCCCTGCCCCCACCTGTCCGTGCTGGCCTCCTACCGCTGGAGTCGTGGTACCAGGACTGTCCCCGAAGCCTCTTCCGCCGTCTACAATGGCTCCCTCTTGCTGTTGCCCCAGGATGGAGTCGGCGGCCTCTACCAGTGCATAGCCACTGAGAACGGCTTCTCATACCCAGTGGTCTCCTACTGGGTGCACAGCCAGGACCAGCCCCTGGCCCTGGACCCGGAGCTGGCGGGCATTCCCCGGGAGCGTGTGCAGGTCCCGCTGACCAGGGTTGGTGGCGGGGCCACTGCGGCTGCCCAGCGATCCTACTGGCTTCACTTTCTCGTCGTCACTGTCCTCCTCGCCTTAGTGCTCTCCGGGGCCCTCATCGTCCTCCTGGCCTCCCCACTGGGGGCACTGCGGGCTCGGGGCAAGGTCCAGGGCTGTGGGACGCTGCCCCCTGGGGAGAAGGCCCCCTTGAGCAGGGAGCCACGCGTCCAGCCCCCCAAAGAAAGCCGGACCTCTGCCACTGATGTGGATGCCGACAACAACTGCCTGGGCACGGAGGTGGCTTAA

Related Sequences

XP_004871243.1 Protein

Sema4a PREDICTED: semaphorin-4A isoform X4 [Heterocephalus glaber]

Length: 761 aa      View alignments
>XP_004871243.1
MALPALGLDPWSLLGLFFFQLLLLLLPPLTAGAGGQGPMPRVRYSAGDPRRALSLFHQKGLQDFDTLLLSGGGNTLYVGVREAVLALDVQHPGAPQLRSMIPWPASDRKKHECALKKKSSETQCFNFIRVLVSFNATHLYACGTFAFSPACTFIEFRDSQLSPISEKTVMEGKGQSPFDPAHKHTAILVDGMLYSGTMNNFLGSEPILMRTLGPRPVLKTDTFLRWLQSDASFVAAVPSTQVVYFFFEETASEFDFFEKLRTSRVAQVCKNDMGGEKLLQKKWTTFLKAQLLCTQPGQLPFNVIRHAVLLPAESAAEARVYAVFTSQWQVGGTRSSAVCSFSLSDIENVFKGQFKELNKETSRWMTYVNPETSPRPGSCAVGPSSDKALTFMKDHFLMDEQVVGTPLLVKSDVEYTRLTVETARGLDGHSYVVMYLGTSTGFLHKAVVSQASRAYLVEEIQLFPEPEPIRNLQLAPSQGAVFAGFSGGVWRVPRANCSVYESCVDCVLARDPHCAWDPESRVCSLLWTLDLMSWKQDMERGNPEWACAKGPLGRSHRPQSRPQIIKEVLVVPNSILELPCPHLSVLASYRWSRGTRTVPEASSAVYNGSLLLLPQDGVGGLYQCIATENGFSYPVVSYWVHSQDQPLALDPELAGIPRERVQVPLTRVGGGATAAAQRSYWLHFLVVTVLLALVLSGALIVLLASPLGALRARGKVQGCGTLPPGEKAPLSREPRVQPPKESRTSATDVDADNNCLGTEVA