Sequence details NCBI ID: XM_004871023.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Arhgap6
Gene Name Rho GTPase activating protein 6, transcript variant X3
Entrez Gene ID 101699830

Database interlinks

Part of NW_004624882.1 (Scaffold)

For more information consult the page for NW_004624882.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARHGAP6 ENSCPOG00000010639 (Guinea pig)

Gene Details

Rho GTPase activating protein 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009550, Guinea pig)

Protein Percentage 94.48%
CDS Percentage 94.2%
Ka/Ks Ratio 0.18358 (Ka = 0.0282, Ks = 0.1535)

ARHGAP6 ENSG00000047648 (Human)

Gene Details

Rho GTPase activating protein 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000338967, Human)

Protein Percentage 85.4%
CDS Percentage 87.31%
Ka/Ks Ratio 0.23221 (Ka = 0.0808, Ks = 0.3479)

Arhgap6 ENSMUSG00000031355 (Mouse)

Gene Details

Rho GTPase activating protein 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033721, Mouse)

Protein Percentage 87.55%
CDS Percentage 86.38%
Ka/Ks Ratio 0.14997 (Ka = 0.0679, Ks = 0.4524)

Arhgap6 ENSRNOG00000003956 (Rat)

Gene Details

Protein Arhgap6

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047194, Rat)

Protein Percentage 87.45%
CDS Percentage 86.11%
Ka/Ks Ratio 0.14204 (Ka = 0.068, Ks = 0.4787)

Genome Location

Sequence Coding sequence

Length: 2325 bp    Location: 3115262..3211495   Strand: +
Raw sequence   
>XM_004871023.1
ATGTCGGGCCGCAGCGTGCGGCTGAGGTCAGTCCCCATCCAGAGTCTCTCGGAGCTGGAGCGGGCTCGGCTGCAGGAAGTGGCTTTTTGTCAGTTGCAGCAGGACTGTGACCTGAGCTGCCAGATCAGCATTCCCAAAGATGGACAAAAGAGAAAGAAATCTTTGAGAAAGAAACTGGATTCCCTAGGAAAAGAGAAAAACAGAGACAGAGAATTCATCCCACAGGCATTTGGAATGCCCTTGTCCCAAGTCATTGCCAATGACAGGGCCTATAAACTCAAGCAGGACTTGCAGAGGGAGGAGCAGGAGGATTCATCTGATTTTGTGGCTTCCCTCATGCCATTTGGAAATAAAAGACAAAACAAAGAACTCTCAAGCAGTAACTCATCTCTCAGCTCCACCTCGGAAACACCAAGCGAGCTGACGTCTCCCAACACTCTGGAACCAGCTCCCCGGGCCAGGAGAAGGGGAGCCATGTCAGTGGATTCCATCACTGATCTGGATGACAACCATTCTCGACTGCTGGAAGCTTTACAGCTCTCCTTGCCTGCTGAGTCGCCAAACAAAAAAGAAAAGGCCAGAGATAAAAAACTCAGTCTGAATCCTATTTACAGACAGGTCCCCAGGCTGGTGGACAGCTGCTGTCAGTATCTGGAAAAACATGGCCTCCAGACAGTGGGGATATTCCGAGTGGGAAGCTCAAAAAAGAGAGTGAGACAACTCCGTGAGGAATTTGACCGTGGGACTGATGTCTCTCTGGAAGAGGAGCACAGTGTTCATGATGTGGCAGCCTTGTTGAAGGAGTTCCTGAGGGACATGCCCGACCCCCTTCTCACCAGGGAGCTGTACACAGCTTTCATCAACACTCTCCTGTTGGAGCCGGAGGAACAGCTGGGCACCTTGAAGCTTCTCATTTACCTTCTACCTTCCTGCAACTGCGACACTCTTCACCGTCTCCTACAGTTCCTCTCCATCGTGGCCAGTCATGCCGATGACAGCGTAGGTGAAGATGGGCAAGAGGTCACTGGGAACAAAATGACATCTCTAAACTTGGCCACCATATTTGGACCCAACCTGCTGCACAAGCAGAAGTCATCAGACAAAGAATTCTCAGTCCAGAGTTCGGCCCGGGCTGAAGAGAGCACAGCCATCATTGCTGTAGTGCAGAAGATGATTGAAAATTATGAAACCCTGTTCATGGTTTCCCCAGATCTCCAGAACGAAGTGCTGATCAGCCTGTTAGAGACAGACCCTGATGTCGTGGACTACTTGCTCAGAAGGAAGGCTTCCCAATCATCAAGCCCTGACATGCTACAGTCGGACGTTTCCTTTTCCATGGGAGGGAGGCATTCATCTACAGACTCCAACAAGGCCTCCAGTGGAGACATCTCCCCTTATGACAACAACTCCCCTGTGCTACCTGAACGTTCCCTGCTGGCTATGCAAGAGGACAGGGCTCCGGGGGGCTCAGAGATGCTTTACAAGGTGCCAGAGAAGTATATGTTGGTGGGCCACTTGCCGTCGTCAAAGTCAACGTCAAGAGAAAGTTCTCCTGGACCAAGGCTTGGAAAAGATATGTCCGAGGAACCTTTCAATATCTGGGGAACTTGGCATTCAACATTAAAAAGTGGATCCAAAGACCCCGGAATGACAGGTTCCTATGGCGACATCTTTGAAAGCAGCTCCCTCCGACCGGGGCCCTGTTCCCTTTCTCAAGGGAACCTGTCTCTCAATTGGCCCCGGTGGCAGAGGAGCCCGGCAGAGCTGGATGACGGCGGCCCTCAAGTCTTTCGCAGGACTCAGACGGCAGCTACCGTGGCACATTGCAGCGTGCACCTTCCGGTGTCGCGGGTCTGCAGCACCCCCCACATCCAGGGCAGTGGCTGCGGCGCGGGGGGGCGGCCGGCGGCCAGGTCCGAGCCGTACTTGACCCTCAGCAGCGCTGAGGACCCCGAGGGCGAGAGAGACGGGACGTGGCTGCCCAGCCGGGCCCAGCCCGCGTCCCAGAGACTTCGGGAGGGCGGCAGGGATGATCGCAGGCCCCCGCCTCCTTACCCGGGCTCCGGGAAGCCCTCGGAGCCGCCCTTGTGGCGGCTTCAGAGGCCTCGGGAAGGCTCAGGAACTGAGGGAGGCCCGCCGGCCGAGCGGGAGCCCCAGGCCGCGCCGAAAAAACTGAGCAGCCGCGCCTACGCCCTGGAGGGCAGCGAACAGAGCGGCCCGAACTTGGGGGAAGCCAGCTGGCTTGACTGGCAGCGAGAGCGGTGGCAGATCTGGGAGCTCCTGTCCACCGACAACCCCGACACCCTCCCGGAGACGCTGGTGTGA

Related Sequences

XP_004871080.1 Protein

Arhgap6 PREDICTED: rho GTPase-activating protein 6 isoform X3 [Heterocephalus glaber]

Length: 774 aa      View alignments
>XP_004871080.1
MSGRSVRLRSVPIQSLSELERARLQEVAFCQLQQDCDLSCQISIPKDGQKRKKSLRKKLDSLGKEKNRDREFIPQAFGMPLSQVIANDRAYKLKQDLQREEQEDSSDFVASLMPFGNKRQNKELSSSNSSLSSTSETPSELTSPNTLEPAPRARRRGAMSVDSITDLDDNHSRLLEALQLSLPAESPNKKEKARDKKLSLNPIYRQVPRLVDSCCQYLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGTDVSLEEEHSVHDVAALLKEFLRDMPDPLLTRELYTAFINTLLLEPEEQLGTLKLLIYLLPSCNCDTLHRLLQFLSIVASHADDSVGEDGQEVTGNKMTSLNLATIFGPNLLHKQKSSDKEFSVQSSARAEESTAIIAVVQKMIENYETLFMVSPDLQNEVLISLLETDPDVVDYLLRRKASQSSSPDMLQSDVSFSMGGRHSSTDSNKASSGDISPYDNNSPVLPERSLLAMQEDRAPGGSEMLYKVPEKYMLVGHLPSSKSTSRESSPGPRLGKDMSEEPFNIWGTWHSTLKSGSKDPGMTGSYGDIFESSSLRPGPCSLSQGNLSLNWPRWQRSPAELDDGGPQVFRRTQTAATVAHCSVHLPVSRVCSTPHIQGSGCGAGGRPAARSEPYLTLSSAEDPEGERDGTWLPSRAQPASQRLREGGRDDRRPPPPYPGSGKPSEPPLWRLQRPREGSGTEGGPPAEREPQAAPKKLSSRAYALEGSEQSGPNLGEASWLDWQRERWQIWELLSTDNPDTLPETLV