Sequence details NCBI ID: XM_004870567.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Plxnd1
Gene Name plexin D1
Entrez Gene ID 101700416

Database interlinks

Part of NW_004624872.1 (Scaffold)

For more information consult the page for NW_004624872.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PLXND1 ENSCPOG00000004989 (Guinea pig)

Gene Details

plexin D1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004491, Guinea pig)

Protein Percentage 91.81%
CDS Percentage 89.35%
Ka/Ks Ratio 0.06764 (Ka = 0.04, Ks = 0.5918)

PLXND1 ENSG00000004399 (Human)

Gene Details

plexin D1

External Links

Gene Match (Ensembl Protein ID: ENSP00000317128, Human)

Protein Percentage 87.01%
CDS Percentage 85.06%
Ka/Ks Ratio 0.05689 (Ka = 0.0649, Ks = 1.141)

Plxnd1 ENSMUSG00000030123 (Mouse)

Gene Details

plexin D1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000015511, Mouse)

Protein Percentage 86.44%
CDS Percentage 83.72%
Ka/Ks Ratio 0.06006 (Ka = 0.0679, Ks = 1.1297)

Plxnd1 ENSRNOG00000025209 (Rat)

Gene Details

plexin D1 (Plxnd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033101, Rat)

Protein Percentage 87.13%
CDS Percentage 83.81%
Ka/Ks Ratio 0.05443 (Ka = 0.0629, Ks = 1.1561)

Genome Location

Sequence Coding sequence

Length: 6162 bp    Location: 572116..542776   Strand: -
Raw sequence   
>XM_004870567.1
ATGGAGCTGGGGCGCAGAGACGAAGCAGGGGGAGAGGCGCAGGTGGCATCGCCCCCCACACATGGCGCAGGACCCCTCCCGGGCTGGCCGGTTGTGCAAGGGGCCTCAGTTTCCGGCCAGTGGAGGGAGCCTCGGGTGCTGGGCACAGGAGAGCTCGGCCCTTCCTTCCTACAGGGCGGGGCACACGACCCGGGCTGTCAGGGGGCTGGGGCCCTGCCCTCTACCCCCAGGACTCAGTTTCCCGATCTGCGAACTGGGAAGCAACAGCTCCGCCTTCGAGGGGGTCTGGGTGCCGCCTGTCCCCGTCGTGGGTCCTCTCAGAACATGGGTAGTGCCTGGCCGGTGCCGGCGGGGCGCAGCTCTGGGGATCCAGACGCGTCCTCACTGGCCCTTCTGGGTCCTTGGGCCCTGCTGCCTGCCAACCCGTCCAAAGGAGCTGGGGTCCCCGTCTGGTGGCTTTGTCCGCCGTCGTCGCGCGCGGGGCTCGCCCGGCCGGGGGCGCTGCTGCTCCTGCTCCTGCTCGCCGCCCCGGCCCGCGGACTGGAGGTGCAGCGCCGCTTCGCCTCGCCCACGCCCACCAACAACTTCGCGCTGGACGGTGCGTCGGGCACCGTGTACCTGGCGGCCGTGAACCGCCTGTACCAGCTGTCGGGCGGCGACCTGAGCCTACAGGATGAGGCGGCCGTGGGCCCCGTGCGCGACAGCCCGCTGTGCCACGCGCCGCAGCTGCCGCAGGCCTCGTGCGAGCACCCGCGGCGCCTCACCGACAACCACAACAAGATCCTGCAGCTGGACGAGCGCCAGGGCCTGGTGGTGGCATGCGGCTCGGTATTCCAGGGCTTCTGTCAGCTGCGGCGCCGGGGCAACATCTCAGCGCTGGCCGTGCGCTTCCCGCCCGCCGCGCCGCCCGCCGCGCCCGTAGCCGTGTTCCCCAGCATGCTCAATGTGGCTGCCAACCACGCCGACGCCTCCACCGTGGCACTCGTGCTGCCGCCCGCCGCGGGCGCGCGGGGCAGTCGGCTGCTCGTGGGCGCCACATACACGGGCTTCGGCAGCGCCTTCTTCCCGCGCAACCGCAGCCTAGAGGACCACCGCTTCGAGAACACTCCCGAGGTGGCCATCCGCTCCCTGGACGCGCAAGGCGACCCGGCGCGGCTCTTCACCTTCGACTTGAACCCGTCGGACGACAATGTGCTTAAGATCAAGCAGGGCGCCAAGGAGCGGCACCGGCTGCGCTTCGTGCGCGCCTTCCTGCATCCGCCGGGTGTGCAGCCCTACGCCTACTTGGCGTTCACTAGCGAAGCGCGAGCGGGCGACAAGGACGGCCAGGCGCGGAGCCTGCTGGCGCGCATCTGCCTGCCGCGCGGCGACGCCAAGAAGCTCACTGAGTCCTACATTGAGCTAGGCCTGCAGTGCGCGGGAGGCGCGGGCCGCGGTGACCTCTACAGCCGCCTGGTGTCCGTGTTCCCCGCGCGAGAGCGCCTCTTCGGCGTCTTCGAGCGGCCCCCGGCGATCCCCGCGCCCCGCACCGCGCCTGCTCCCGCCGCACTCTGCGCCTTCCTCTTCGCCGACGTGCAGGCTGCTATCCGCTCCGCACGCGCCGCCTGCTTCGTGGAGCCGGCGGCCGGGGTGGTGGCGGTGCTGGACAGCGTGGTGCAGGGCACGGGCCCGGCCTGCGAGCGCAAGCGCAACCTCCAGCTGCAGCCAGAGCAGCTAGACTGTGGTGCGGCCCACCTGCAACACCCACTGACCATCCTGCAGCCTCTGAAGGCCACCCCTGTGTTCCGCGCCCCGGGCCTCACCGCAGTGGCTGTGGCCAGTGCCAACAACTACATGGCTGTCTTCCTGGGCACGGCCACTGGGCGGCTCCTAAAGCTCAGCCTTAACGAGAGCATGCAAGTGGTCAGCCGGCGCATGGTGACAGTGGCCTATGGGGAGCCTGTGCATCCCATCATGCAGTTCGACCCCACAGACCCCAGCTACCTCTACCTGATGACTTCCCATCAGATGGCCCGTGTGAAGGTTGCAGCCTGCGAGGCACATGCCACCTGTGGGGACTGCGTGGGCGCGGCCGATGCCTACTGTGGCTGGTGTGTGCTGGAGACACGGTGCACCATGCAGCAGGACTGCGACAACTCCAGCCAGCCGCACTTCTGGACCAGCGCCAGTGAGGGCCCCAGCCGCTGCCCCGCCATGGCTGTGCTGCCCGCAGAGATTGACGTGCACCTGGAGCACCCAGGCATGATCCTGCAGGTCTCTGGCAGCCTGCCCAGCCTCAGTGGCCTGGAGATGGCCTGTGACTATGGCAATGGCATCCACACGGTAGCTCGAGTCCCGGGCCCCGCCGATGGCCACCAGATCACCTACTGCAACCTTCTGCCCCGGGACCACTTCCCAGCCTTCCCACCTCAGCAAGACCACGTGACCGTGGAGATGTCCCTGAGGGTCCACGGGCGCGCCATCGTCTCAGCCAACTTCACCATCTATGACTGCAGCCGTGTTGCCCACGTGGCCCCCAGCACTGCCTGTACCAGCTGCCTGTCTGCACGCTGGCCCTGCTTCTGGTGTACAGAGCAGCACATCTGTATCTCCAACCAGTCCCAGTGCCAGGCCTCATCCAACCCCAAGAGCCCCCGGGACTGTCCCCAGACCCTGCCCTCTCCTCTGGCACCTGCGCCCACGGGCGGAGCCCAGGACATCCTCGTCCCTCTGGCCAACGCTGCCTCCTTCCACGGAGCAGTGCTCCAGTGCAGCTTCGGGCTGGAGGACAACTTTGAGGCCGTGTGGGTGAATGAGTCTGCCATCCGCTGCAGCCACGTGGTGCTGCACACGGCCCAGAAGAGCCAGATGTTTCTGCTCAGCCTCCAGCTGCAGGGGCAGCCACCCCGGTTCCTGGACAGCCCTGACCCCATGACAGTCGTGGTCTACAACTGCGCCATGGGCAGCCCCGACTGCTCCCAGTGCCTGGGCCGAGAGGACTTGGGCCATCTCTGCATGTGGAGCGATGGCTGCCGCTCACGGGGACCCCTGCCACCCCCGCCTGGCACCTGCCCAGCCCCCGAGATCCACACGATTGAGCCCCTGAGTGGCCCCCTGGACGGAGGGACCCTGCTGACCATCCGTGGCCGGGACCTGGGCCGGCGGCTCAGCGATGTGGCCCACAGCGTGTGGATCGGCAGCGTGGCCTGCGAGTTGCTGGCCAACAGATACATCGTGTCCGAGGAGATCGTGTGTGTCACAGGGCCAGCCACAGCAGCGTTCTCAGATGTGGTGACTGTGAACATGTCCAAGGAGGGGACGTCCCGGGAGCGCTTCTCCTATGTGCTGCCCCAGGTTCACTCCCTGGAGCCAGCCGTGGGCCCCACAGCGGGTGGCACCCGGATCACCATCCACGGGAGCGACCTCCATGTGGGCTCCAAGCTGCAGGTCCTGGTGAACGACACTGACCCCTGCACCGAGCTTGTGCGCTCAGACACCAGCATTGCTTGCACCATGCCCGCCGGGGCCCTGCCCGCCCCGGTGCCTGTGTGTGTGCGCTTTGAGCGCCGGGGCTGCGCACACGGGAACCTCAGCTTCACCTACATGCGGAACCCGGTCATCATGGCCATCAGCCCGCGCCGCAGCCCCGTCAGTGGCGGCAGAACCATCACGGTGGCCGGTGAGCGCTTCCACATGGTTCAGAACGTATCCATGGCTGTGCACCGCATCGGCCGGGAGCCCACGCTGTGCAAGGTCCTCAATGCCACACTCATCACCTGCCCGTCACCTGGGGCCCTGCACAACGCCTCAGCACCTGTGGCCTTCTTCATCAATGGCCGGGTCTACGTGGACGAGGCACCCTATGAGCCCCTGCCTGACCCGGAGGAGATGCCACGTGGGGGCCGCTTCCATCTGGACTACCTGCCCAACCCGCAGTTCTCCACAGCACGGCGTGAGCGTTGGATCCGCCACCACCCCGGGGAGCCGCTCACCCTCGTCATCCACAAGGAGCAGGATGGCCTGGGGCTTGAGAGCCACGAGTACCAGGTCAAGATCGGCCAGGTGGCCTGCGACATCCAGATCGTCTCTGACAGAGTCATCCACTGCTCAGTCAATGACTCTCTGGATGCTGCGGAGGGACAGCTGCCCATCACAGTCCAGGTGGGGAACTTCAACCAGACCATCGCCACGCTGCAACTAGGGGGCAGCGAGACGACCATCGTGGCCTCCATCGTCATCTTCAGTGTGCTGTTGCTGCTGTCCGTGGTCGCCCTGTTCTTCTTCTGCACCAAGAGCCGCCGCGCCGAGCGCTACTGGCAGAAGACGCTGCTGCAGATGGAGGAGATGGAGTCTCAGATCCGCGAGGAGATCCGCAAAGGCTTTGCCGAGCTGCAGACAGACATGACGGACCTGACTAAGGAGCTGAACCGCAGCCAGGGCATCCCCTTCCTGGAATACAAGCACTTTGTGACCCGCACTTTCTTTCCCAAGTGCTCGTCCCTGTATGAAGAGCGCTACATGCTCCCGTTGCAGTCCCTGGGCTCAAAAGGGGGCCTACCAGTGCAGGAGACCCACCCACTGCTGGGAGAGTGGAATGTCCCTGAGAACTGCCGGCCCAGCATGGAGGAGGGCATCAGCCTGTTCTCCTCGCTGCTCAGCAACAAGCACTTCCTCATCATCTTTGTGCATGCGCTAGAGCAGCAGAAGGACTTCGCAGTGCGTGACAGGTGCAGCCTGGCATCACTGCTGACCATTGCACTGCATGGCAAGCTTGAGTACTATACCAGCATCATGAAGGAGCTGCTAGTGGACCTCATTGACGCCTCTGCTGCCAAGAACCCCAAGCTCATGCTGCGGCGCACCGAGTCGGTGGTAGAGAAGATGCTGACCAACTGGATGTCCATCTGCATGTACAGCTGCCTGCGGGAGACCGTCGGGGAGCCGTTCTTCCTGCTGCTGTGCGCCATCAAGCAACAGATCAACAAGGGCTCCATCGATGCCATCACCGGCAAAGCGCGTTACACGCTCAATGAGGAGTGGCTGCTTCGTGAGAACATCGAGGCCAAGCCCAGGAACCTGAACGTGTCCTTCCAGGGCTGCGGCATGGACTCCCTGAGTGTGCGCGCCATGGACACGGACACACTGACGCAGGTGAAGGAGAAGATCTTGGAGGCCTTCTGCAAGAACGTGCCCTATTCGCAGTGGCCGAGAGCCGAGGACGTGGATCTGGAATGGTTTGCTACTAGCACGCAGAGCTACATCCTGCGGGACCTGGATGACACCTCGGTGGTAGAGGATGGGCGCAAGAAGCTGAACACCCTGGCCCACTACAAGATCCCAGAAGGCGCTTCTTTGGCCATGAGCCTAACAGACAAGAAAGACAACACTCTGGGCCGAGTAAAAGACTTGGACACGGAGAAGTATTTCCACTTGGTGCTGCCCACCGATGAGCTGGCAGAGCCCAAGAAATCGCACCGGCAGAGCCACCGCAAGAAGGTGCTGCCCGAGATCTACCTGACCCGCCTGCTGTCCACCAAGGGCACGTTGCAGAAGTTCCTGGACGACCTATTCAAGGCCATTCTGAGCATTCGTGAAGACAAGCCCCCCCTGGCTGTCAAGTACTTCTTCGATTTCCTGGAGGAGCAGGCGGAGAAGAGGGGCATCTCAGACCCAGACACGCTGCACATCTGGAAGACCAACAGCCTGCCCCTCCGCTTTTGGGTGAACATCCTGAAGAACCCCCAGTTTGTGTTCGACATCGAGAAGACAGACCACATTGATGCCTGCCTGACGGTCATCGCACAGGCCTTCATTGATGCCTGCTCCATCTCTGACCTGCAGCTGGGCAAGGACTCACCCACCAACAAGCTGCTGTATGCGAAGGAGATCCCCGAGTACCGCAAGGTCGTGCAGCGCTACTACAAGCAGATCCAGGACATGGCGCCGCTCAGTGAGCAGGAGATGAACGCCCATCTGGCTGAGGAGTCTCGGAAGTACCAGAATGAGTTCAACACTAATGTGGCGCTGGCAGAGGTCTATAAATATGCCAAGCGGTACCGCCCACAGATCGTGACAGCGCTGGAGGCCAACCCCACGGCCCGGAGGACGCAGCTGCAGCACAAGTTCGAGCAGGTGGTGGCCCTGATGGAAGACAACATCTATGAGTGTTACAGCGAGGCCTGA

Related Sequences

XP_004870624.1 Protein

Plxnd1 PREDICTED: plexin-D1 [Heterocephalus glaber]

Length: 2053 aa      View alignments
>XP_004870624.1
MELGRRDEAGGEAQVASPPTHGAGPLPGWPVVQGASVSGQWREPRVLGTGELGPSFLQGGAHDPGCQGAGALPSTPRTQFPDLRTGKQQLRLRGGLGAACPRRGSSQNMGSAWPVPAGRSSGDPDASSLALLGPWALLPANPSKGAGVPVWWLCPPSSRAGLARPGALLLLLLLAAPARGLEVQRRFASPTPTNNFALDGASGTVYLAAVNRLYQLSGGDLSLQDEAAVGPVRDSPLCHAPQLPQASCEHPRRLTDNHNKILQLDERQGLVVACGSVFQGFCQLRRRGNISALAVRFPPAAPPAAPVAVFPSMLNVAANHADASTVALVLPPAAGARGSRLLVGATYTGFGSAFFPRNRSLEDHRFENTPEVAIRSLDAQGDPARLFTFDLNPSDDNVLKIKQGAKERHRLRFVRAFLHPPGVQPYAYLAFTSEARAGDKDGQARSLLARICLPRGDAKKLTESYIELGLQCAGGAGRGDLYSRLVSVFPARERLFGVFERPPAIPAPRTAPAPAALCAFLFADVQAAIRSARAACFVEPAAGVVAVLDSVVQGTGPACERKRNLQLQPEQLDCGAAHLQHPLTILQPLKATPVFRAPGLTAVAVASANNYMAVFLGTATGRLLKLSLNESMQVVSRRMVTVAYGEPVHPIMQFDPTDPSYLYLMTSHQMARVKVAACEAHATCGDCVGAADAYCGWCVLETRCTMQQDCDNSSQPHFWTSASEGPSRCPAMAVLPAEIDVHLEHPGMILQVSGSLPSLSGLEMACDYGNGIHTVARVPGPADGHQITYCNLLPRDHFPAFPPQQDHVTVEMSLRVHGRAIVSANFTIYDCSRVAHVAPSTACTSCLSARWPCFWCTEQHICISNQSQCQASSNPKSPRDCPQTLPSPLAPAPTGGAQDILVPLANAASFHGAVLQCSFGLEDNFEAVWVNESAIRCSHVVLHTAQKSQMFLLSLQLQGQPPRFLDSPDPMTVVVYNCAMGSPDCSQCLGREDLGHLCMWSDGCRSRGPLPPPPGTCPAPEIHTIEPLSGPLDGGTLLTIRGRDLGRRLSDVAHSVWIGSVACELLANRYIVSEEIVCVTGPATAAFSDVVTVNMSKEGTSRERFSYVLPQVHSLEPAVGPTAGGTRITIHGSDLHVGSKLQVLVNDTDPCTELVRSDTSIACTMPAGALPAPVPVCVRFERRGCAHGNLSFTYMRNPVIMAISPRRSPVSGGRTITVAGERFHMVQNVSMAVHRIGREPTLCKVLNATLITCPSPGALHNASAPVAFFINGRVYVDEAPYEPLPDPEEMPRGGRFHLDYLPNPQFSTARRERWIRHHPGEPLTLVIHKEQDGLGLESHEYQVKIGQVACDIQIVSDRVIHCSVNDSLDAAEGQLPITVQVGNFNQTIATLQLGGSETTIVASIVIFSVLLLLSVVALFFFCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYMLPLQSLGSKGGLPVQETHPLLGEWNVPENCRPSMEEGISLFSSLLSNKHFLIIFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKELLVDLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEWFATSTQSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDNTLGRVKDLDTEKYFHLVLPTDELAEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPPLAVKYFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDACLTVIAQAFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKVVQRYYKQIQDMAPLSEQEMNAHLAEESRKYQNEFNTNVALAEVYKYAKRYRPQIVTALEANPTARRTQLQHKFEQVVALMEDNIYECYSEA