Sequence details NCBI ID: XM_004869980.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Greb1
Gene Name growth regulation by estrogen in breast cancer 1
Entrez Gene ID 101706488

Database interlinks

Part of NW_004624865.1 (Scaffold)

For more information consult the page for NW_004624865.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GREB1 ENSCPOG00000006588 (Guinea pig)

Gene Details

growth regulation by estrogen in breast cancer 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005933, Guinea pig)

Protein Percentage 83.09%
CDS Percentage 84.93%
Ka/Ks Ratio 0.11036 (Ka = 0.0862, Ks = 0.7809)

GREB1 ENSG00000196208 (Human)

Gene Details

growth regulation by estrogen in breast cancer 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000370896, Human)

Protein Percentage 81.66%
CDS Percentage 80.43%
Ka/Ks Ratio 0.08097 (Ka = 0.1015, Ks = 1.253)

Greb1 ENSMUSG00000036523 (Mouse)

Gene Details

gene regulated by estrogen in breast cancer protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000124348, Mouse)

Protein Percentage 81.96%
CDS Percentage 79.34%
Ka/Ks Ratio 0.07251 (Ka = 0.1012, Ks = 1.395)

Greb1 ENSRNOG00000024651 (Rat)

Gene Details

gene regulated by estrogen in breast cancer protein

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036412, Rat)

Protein Percentage 81.33%
CDS Percentage 79.11%
Ka/Ks Ratio 0.07349 (Ka = 0.1034, Ks = 1.4075)

Genome Location

Sequence Coding sequence

Length: 5580 bp    Location: 4367053..4317919   Strand: -
Raw sequence   
>XM_004869980.1
ATGGGGAACTCGTACTCGGGCCACCTGAAGAGCACGCGCTTCGAGGAGGTGCTGCACAACTCCATCGAGGCCTCGCTGCGCTCCAACACCCTCGTGCCGCGGCCCGTCTTCTCCCAGCTCTACTTGGAAGCCGAGCAGCAGCTGTCCTCGCTGGAAGGGGGCACCCGAGCAGACAATGAGGAAGAGGAAGAGGAGGGAGAAGGAGGGCTGGAAACCAATGGACCCGGAAACCCCTATCAGCTGGCTCCTCCTCCTGAAGGGTGCTGTACCACAGACGGGTTCTGCCAGGCCGGGAAGGACCTGCGCCTCGTGTCCATCTGCAGTGAGCCCTTGGAGGTCCCTGCGGGCTTCTTGCTGGTGGGCGCCAAGTCCCCTGGCCTGCCTGGCCACCTGCTTGTGTGTGCTGTGGACCAGCGCTTCCTGCCGGATGACAGTGGCCACAACGCCCTGCTCGGTTTCTCCGGGAACTGCGTCGGCTGTGGCAGGAAAGGCTTCTGTTACTTCACCGAGTTCTCCAACCACATCAACCTGAAGCTCAGCACGCAGCCCAAGAAGCAGAAGCTGCTGAAGTATTACCTGGTCCGAGATGCCCACGGCACCCTCACCAAGGGGCCCCTGATCTGCTGGAAAGGCTCCGAGTTCAGAAGCCGCCAGGCCTCTGCCAATGTGAGCTCCGGTCCTGTCTTCCTGCCACTGGAGGGCTCGGGGCCTCTGGCTGCCTTTTCCGGGGAGCCCGGTGCTCCTGGGCTGAACCCCGGCAACCCAACGGGCGCCCAGCAGGCAGGACCTGCCCCGGCCTCGGATCAGCCTCCGTCCGCAGCAGCCCCCGGGCCTGGCCCGGCCGTCTTCAATGGCAGAGACTCGCCCAGGCGCCAGCAGCTGGTGCGGGGCAGCGCGTCTGGTCCTTTGGCCCGGCCCTCGGCCTTAGGGATCTTGCCGAACTCCGGGCCCCCAAAAAAGCGCCACAAAGGGTGGTCCCCAGAGTCCCCATTGGTGGCAGATGCCGGCTACCCTCAGGGCGGTGTGAACAGAGCTAAGTACGAAGGCGTGGGCCTGGCCTGTGTGCCCCAGGCGGGAGTGGTAGGCCCGGCTTCAGTCACTTTTCCTGTTGTGGCCTCCGGAGAGCCTGTGTCTGTTCCTGACAATTTGCTGAAAATTTGCAAAGCCAAGCCGGTGATATTTAAAGGCCACGGGAACTTCCCCTACCTGTGTGGGAACCTGAATGACGTGGTGGTCAGCCCGCTGCTGTACACCTGCTACCAGAACTCCCAGTCCGTCTCCAGGGCCTATGAGCAGTACGGCTCCTCCACCGTGCAGCCCATCTCCGAGGAGATGCAGCTCCTTCTCACAGTCTACTACCTCGTCCAGCTGGCGGCCGACCAGGTGCCGCTGATGGAGGACCTGGAGCAGATCCTGCTGCGCTCCTGGCGCGAGTCGCACCTGGCTGAGGTCCGGCAGTGCCCGCCGGTGCCCCTGCAGTCCTGCCCACCCATGCCCGGCCCTGTGGCACCTGTGACCTCGGCGCAGCTGCCCTGGCTGGCCGGCCTGGCTGCCAGCTCCTGCAACGACAGCGTCCACGTCATTGAGTGCACCTACTCGCTGGCTGAGGGCCTGGCCGAAATGTTCCGCCTGCTGGTCGAGGGCAAGCTGGCCAAGACCAACTACGTGGTCATCATCCGCGCCTGCCGAAATGCCGCCATCGACTCCTGCATCGCTGTCACCGTGTGGGTCCCCTGCTCATCGACTGGGCGCCTGGCTGCAGGTGACCACCCCGAGCCACGAGGCGTGCGGCCCTTCCAGCTGGCTGTGGCGCACAAGCTGCTGTCACACGTGTGCTCCATTGCGGACTCCAGCACCCAGAACCTGGACCTGGGCTCCTTTGAGAAGGTGGATTTCCTCATCTGCATCCCACCCTCTGAGGTCGCCTTCCAGCAGACCGTGGGCCGTGTGTGGCACTCAGGGGTACTGCGGGAGCTGGGCCTGGAGCCCGAGCCCAGGAGCAGGCAGAGGGCGGAGCGGCACGTGCTGAAGCTGGACGCCGAGGCGCATGCCAGGTTCCAGGCGTTTCTCCAGAGCTCCCTCCAGAACCCGCACACGCTCTTCTTGCTCATCCACGACCATGCGCACTGGGACCTCGTGAGTAGTGCCGTCCACAATCTTTACTCTCAAAGCGACCCATCTGTGGGGCTGGTGGACAGACTGCTTAACTGCAGGGAGGTGAAGGAGGCCCCCAACATTGTGATGCTGCACGTGACATCCTTCCCGTACGCGCTGCAGACCCAGCACACCCTCATCAGCCCCTACAATGAGATCCACTGGCCGGGGCCCTACAGCAACGGTGTGGACCTGTACCCTGAAAATAAGAAGTACTTCGGGCTGGCCGAGTTCACTGAGTCCACCCTCTCTGGACACAGCCTTCCCTTGCTCAGATATGACAGCTCCTTTGAGGCCATGGTCACCACGCTGGGAAAAAGGTTCCCACGCCTGCACAGCGCCGTCATCCGCACGCTGGTCCTGGTGCAGCACTACGCGGCCGCGCTGATGGCGGCGCGCGGCCTCCCGCAGATGAAGAACCACACGTCGGTGGAGACGCTGGAGATCACGCAGAACCTCCTGCACGCTCCCCGGCAGTGTCCCCGTGGCCACGGGCTCATGGTGCTGCTGCGTGTGCCCTGCCCGCCGCTGGCCGCAGTGGCCTACGAGCGGCTGGCGCATGTGCGGGCGCGGCTGGCCCTGGAGGAGCACTTCGAGATCATCCTGGGCGACCCGCGCTCCGGCCTCTCCGTGGGCACGCACTTCGTGAAGCAGCTCAAGATGTGGCAGAAGATCGAGGATGCCGAGTGGAGGCCGCAGACGTACCTGGAGCTGGAGGGCCTGCCCTGCATCCTCATCTTCAGCGGGATGGACCCGCACGGCGAGTCCTTGCCCAGGTCCCTGCGGTACTGTGACCTTCGCCTCATCAACGCCTCCTGCCTGGTGCGCTCAGCCCTGGAGCAGGAGCTCGGCCTGGCCGCCTATTTTGTCCACAGTGAGGTGGCCCCGGAGCAGGTGGCCCAGAGCGAGACCCCAGACAGCGATGGCGAGAAGCCCAGCATCTCCGAGGACGAGGAGGCAGGGACAGAAGCACATTTCGGAGCAGCCTGGCCTTCGGAGAGGCGCAGCCCCGTGAAGAGGGAGCGGTCCTGCTCCCACGACTCGGCGTGCTCCTCCCTGTCCTCCCTCGTGTCTGGCTTGGGCCCCTGCAGCGAGACCGCGGCTCAGCCCCCTGGCCCTGTGCAGGGGGAGCCGGCCAGGTCCTCCCCGCCCACTGGCCCCGTGGAGGAGGCCAGGGCACCCGGGGAGAAGCCACGGTCCAACTGTGCCCCGAGGGCCGGCCAGCGGAGCCTGCAGGTGCCGGCCACCTCGTCCTCGCAGCAGTCCTCCTCCTCCCCGGGCGCGACCTGCTCGGGCGACGTGCTCCTGCAGGCCTCGAAGTGCGCCCTGGCCAAGGCCTGCCGCCAGCCACCCGTCGTCTTCCTGCCCAAGCTGGTGTACGACATGCTCACTGCCACCGACAGCAGTGGCCTGCCCAAGGCCACCTCCCTGCTGCCCGCACCCTCCGTCATGTGGACCAGCTCCTTCCGGCCCCTGCTCAACAAGACCATGACCTCCACTGAGCAGTCACTGTACTACCGACAGTGGACGGTGCCCCGGCCCAGCCACATGGACTACGGCAACCGCGCTGAGGGCCGTGTGGACGGCTTTCATCCCCGCCGGCTGCTGCTCAGTGGGCCCCCGCAGATCGGAAAGACGGGGGCCTACCTGCAGTTCCTCAGCAACCTGTCCAGGATGCTCGTGCGGCTGACGGAGGTGGACGTGTACGACGAGGCAGAGATCAACACTGGCCCCCGGGAAGAATCCGAGGGGCATTACGCCCAGCTCAGTGACTCCTGGCCGGACCCAGAGCTGCTCCAGAAGATGCCCTTTGATTACCTCATCCACGACCCCAAGTACGAGGACGCCAGTCTGATCTGTTCCCACCAGAAGGGCGTCAAGAGGGAAGACAGAGGGACCCGGAGGCCCGAGGACCCCCCTGTGCGTCGGCAGACGGCCCGGATGCGGCTGTCCAAGTACGCAGCACACAACACCTACCACCACTGCGAGCAGTGCCAGCACTACATGGGCTCCCACCCCCGCTACCAGCTATACGAGTCCAGCCTGCACGCCTTCGCCTTCTCCTACTCCATGCTTGGCGAAGAGGTGCAGCTGCACTTCATCATCCCCAAGTCCAAGGAGCACCACTTTGTCTTCAGCCAGCCTGGGGGCCAGCTGGAGAGCATGCGTCTGCCACTGGTCACCGACACGAGTCAGGAGTACATAAAAAGTCCGACGTTCACACCGACGACTGGCCGGCATGAACACGGGCTCTTTAACCTGTACCACGCCATGGACGGTGCCAGCCACCTGCACGTGCTGGTCGTCAAGGAGTATGAGATGGCCATCTACAAGAAGTATTGGCCCAATCATATCATGCTGGTCCTGCCCAGCATCTTCAACAACGCTGGAGTGGGTGCTGCCCACTTCCTGATCAAGGAGCTGTCCTACCACAACCTGGAGCTGGAGCGGAGCCGGCAGGAGGAGCTGGGCATCAAGCCACAGGACATCTGGCCGTTCATTGTCATTTCCGACGACTCCTGCGTGATGTGGAACGTGGTGGATGTGGACCGCTCTGGGGAGCGCAGCCGGGAGTTCTCGTGGTCGGAGAGGAACGTGTCGCTGAAGAACATCCTGCAGCACATCGAGGCAGCGCCCAACATCACGCACTACGCCCTCCTGGGCATGCGCAAGTGGGCCAGCGGGACGCGCGACGTGCGGGAGCCCTTCTCGCGCTGCCATGTGCACGACTTCATCATCCTGAACGTGGACCTCACCCAGAACGTGCAGTACAGCCAGAACCGCACTGCAGGAAGGAGAATAATCCATCAGCAGGTGTTTACCGAGGGTCTCTACGAGTATGCTTTGGTGGCTGGCCGAGCGATGTTCTACCCAGCCTTCCCAGCCCACTCCCCTCGGCCTGATCCCACCCTCGCCCCACAGGTGTCTGACAGCTCTGTAGCCGTTGTGCCAGCCCAGTACATCTGTGCCCCCGATAGCAAGTACACGTTCCTCGCAGCACCCGCCCAGCTGCTGCTGGAGAAATTCCTCCAGCACCACAGCCACCGATTCTTCCCGCTGTCCCTGAAGAACCACAGGCACCCCGTGCTGTCCGTGGACTGCTATCTTAACCTGGGGCCTCAGATTTCTGTCTGTTACGTGAGCTCCAGGCCGCACTCTCTGAACATCAGCTGCTCCGACCTGAGGTTCAGCGGCCTCCTGCTGTACCTGTGTGATTCCTTTGTGGGGGCTGGCTTCCTGAAACAGTTCCACTTCCTCACAGGCGCCACGCTGTGCGTGATCTGCCGGGACCGGAACTCGCTGCGCCAGACCGTGGTGCGCCTGGAGCTGGAGGACCAGTGGCAGTTCCGGCTGCGCGACGAGTTCCAGACGGCCAACGCGCGCGAGGACCGGCCGCTCTTCCTGCTCACGGGCCGGCACATCTGA

Related Sequences

XP_004870037.1 Protein

Greb1 PREDICTED: protein GREB1 [Heterocephalus glaber]

Length: 1859 aa      View alignments
>XP_004870037.1
MGNSYSGHLKSTRFEEVLHNSIEASLRSNTLVPRPVFSQLYLEAEQQLSSLEGGTRADNEEEEEEGEGGLETNGPGNPYQLAPPPEGCCTTDGFCQAGKDLRLVSICSEPLEVPAGFLLVGAKSPGLPGHLLVCAVDQRFLPDDSGHNALLGFSGNCVGCGRKGFCYFTEFSNHINLKLSTQPKKQKLLKYYLVRDAHGTLTKGPLICWKGSEFRSRQASANVSSGPVFLPLEGSGPLAAFSGEPGAPGLNPGNPTGAQQAGPAPASDQPPSAAAPGPGPAVFNGRDSPRRQQLVRGSASGPLARPSALGILPNSGPPKKRHKGWSPESPLVADAGYPQGGVNRAKYEGVGLACVPQAGVVGPASVTFPVVASGEPVSVPDNLLKICKAKPVIFKGHGNFPYLCGNLNDVVVSPLLYTCYQNSQSVSRAYEQYGSSTVQPISEEMQLLLTVYYLVQLAADQVPLMEDLEQILLRSWRESHLAEVRQCPPVPLQSCPPMPGPVAPVTSAQLPWLAGLAASSCNDSVHVIECTYSLAEGLAEMFRLLVEGKLAKTNYVVIIRACRNAAIDSCIAVTVWVPCSSTGRLAAGDHPEPRGVRPFQLAVAHKLLSHVCSIADSSTQNLDLGSFEKVDFLICIPPSEVAFQQTVGRVWHSGVLRELGLEPEPRSRQRAERHVLKLDAEAHARFQAFLQSSLQNPHTLFLLIHDHAHWDLVSSAVHNLYSQSDPSVGLVDRLLNCREVKEAPNIVMLHVTSFPYALQTQHTLISPYNEIHWPGPYSNGVDLYPENKKYFGLAEFTESTLSGHSLPLLRYDSSFEAMVTTLGKRFPRLHSAVIRTLVLVQHYAAALMAARGLPQMKNHTSVETLEITQNLLHAPRQCPRGHGLMVLLRVPCPPLAAVAYERLAHVRARLALEEHFEIILGDPRSGLSVGTHFVKQLKMWQKIEDAEWRPQTYLELEGLPCILIFSGMDPHGESLPRSLRYCDLRLINASCLVRSALEQELGLAAYFVHSEVAPEQVAQSETPDSDGEKPSISEDEEAGTEAHFGAAWPSERRSPVKRERSCSHDSACSSLSSLVSGLGPCSETAAQPPGPVQGEPARSSPPTGPVEEARAPGEKPRSNCAPRAGQRSLQVPATSSSQQSSSSPGATCSGDVLLQASKCALAKACRQPPVVFLPKLVYDMLTATDSSGLPKATSLLPAPSVMWTSSFRPLLNKTMTSTEQSLYYRQWTVPRPSHMDYGNRAEGRVDGFHPRRLLLSGPPQIGKTGAYLQFLSNLSRMLVRLTEVDVYDEAEINTGPREESEGHYAQLSDSWPDPELLQKMPFDYLIHDPKYEDASLICSHQKGVKREDRGTRRPEDPPVRRQTARMRLSKYAAHNTYHHCEQCQHYMGSHPRYQLYESSLHAFAFSYSMLGEEVQLHFIIPKSKEHHFVFSQPGGQLESMRLPLVTDTSQEYIKSPTFTPTTGRHEHGLFNLYHAMDGASHLHVLVVKEYEMAIYKKYWPNHIMLVLPSIFNNAGVGAAHFLIKELSYHNLELERSRQEELGIKPQDIWPFIVISDDSCVMWNVVDVDRSGERSREFSWSERNVSLKNILQHIEAAPNITHYALLGMRKWASGTRDVREPFSRCHVHDFIILNVDLTQNVQYSQNRTAGRRIIHQQVFTEGLYEYALVAGRAMFYPAFPAHSPRPDPTLAPQVSDSSVAVVPAQYICAPDSKYTFLAAPAQLLLEKFLQHHSHRFFPLSLKNHRHPVLSVDCYLNLGPQISVCYVSSRPHSLNISCSDLRFSGLLLYLCDSFVGAGFLKQFHFLTGATLCVICRDRNSLRQTVVRLELEDQWQFRLRDEFQTANAREDRPLFLLTGRHI