Details from NCBI annotation

Gene Symbol Hpcal1
Gene Name hippocalcin-like 1, transcript variant X3
Entrez Gene ID 101699820

Database interlinks

Part of NW_004624865.1 (Scaffold)

For more information consult the page for NW_004624865.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HPCAL1 ENSCPOG00000019439 (Guinea pig)

Gene Details

hippocalcin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018852, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 93.61%
Ka/Ks Ratio 0.001 (Ka = 0.0009, Ks = 0.8581)

HPCAL1 ENSG00000115756 (Human)

Gene Details

hippocalcin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000371184, Human)

Protein Percentage 99.48%
CDS Percentage 94.13%
Ka/Ks Ratio 0.00236 (Ka = 0.002, Ks = 0.8319)

Hpcal1 ENSMUSG00000071379 (Mouse)

Gene Details

hippocalcin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000071756, Mouse)

Protein Percentage 98.96%
CDS Percentage 90.85%
Ka/Ks Ratio 0.00389 (Ka = 0.0041, Ks = 1.057)

Hpcal1 ENSRNOG00000005492 (Rat)

Gene Details

hippocalcin-like 1 (Hpcal1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007374, Rat)

Protein Percentage 98.96%
CDS Percentage 91.36%
Ka/Ks Ratio 0.00416 (Ka = 0.0041, Ks = 0.992)

Genome Location

Sequence Coding sequence

Length: 582 bp    Location: 4877135..4862651   Strand: -
>XM_004869966.1
ATGGGCAAGCAGAACAGCAAGCTGCGGCCGGAGGTGCTGCAAGACCTGCGTGAGAACACGGAGTTCACCGACCATGAGCTGCAGGAGTGGTACAAGGGCTTCCTAAAGGACTGCCCCACCGGCCACCTCACCGTGGACGAGTTCAAGAAGATCTACGCCAACTTCTTCCCCTACGGCGACGCCTCCAAGTTCGCCGAGCATGTCTTCCGCACCTTTGACACCAACGGTGATGGCACCATCGACTTCCGGGAGTTCATCATCGCGCTGAGCGTGACTTCTCGGGGGAAGCTGGAGCAGAAGCTCAAGTGGGCCTTCAGCATGTATGATCTGGATGGCAACGGGTACATCAGCCGCAGCGAGATGTTGGAGATTGTGCAGGCCATCTACAAAATGGTGTCGTCTGTGATGAAGATGCCGGAGGACGAGTCCACCCCGGAGAAGCGGACAGACAAGATCTTCAGACAGATGGACACAAACAACGACGGCAAACTGTCCCTGGAAGAATTCATCAAAGGTGCCAAGAGCGACCCCTCCATCGTGCGGCTGCTGCAGTGCGACCCCAGCAGCGCCAGCCAGTTCTGA

Related Sequences

XP_004870023.1 Protein

Hpcal1 PREDICTED: hippocalcin-like protein 1 isoform X3 [Heterocephalus glaber]

Length: 193 aa      View alignments
>XP_004870023.1
MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLTVDEFKKIYANFFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIKGAKSDPSIVRLLQCDPSSASQF