Details from NCBI annotation

Gene Symbol Odc1
Gene Name ornithine decarboxylase 1
Entrez Gene ID 101699456

Database interlinks

Part of NW_004624865.1 (Scaffold)

For more information consult the page for NW_004624865.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ODC1 ENSCPOG00000008476 (Guinea pig)

Gene Details

ornithine decarboxylase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007619, Guinea pig)

Protein Percentage 93.06%
CDS Percentage 89.3%
Ka/Ks Ratio 0.05507 (Ka = 0.0343, Ks = 0.6235)

ODC1 ENSG00000115758 (Human)

Gene Details

ornithine decarboxylase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000234111, Human)

Protein Percentage 90.89%
CDS Percentage 81.2%
Ka/Ks Ratio 0.02975 (Ka = 0.0456, Ks = 1.533)

Odc1 ENSMUSG00000011179 (Mouse)

Gene Details

ornithine decarboxylase, structural 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128661, Mouse)

Protein Percentage 89.15%
CDS Percentage 81.27%
Ka/Ks Ratio 0.04838 (Ka = 0.0618, Ks = 1.2764)

Odc1 ENSRNOG00000005424 (Rat)

Gene Details

ornithine decarboxylase 1 (Odc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007259, Rat)

Protein Percentage 90.02%
CDS Percentage 81.85%
Ka/Ks Ratio 0.04772 (Ka = 0.0599, Ks = 1.2557)

Genome Location

Sequence Coding sequence

Length: 1386 bp    Location: 4851635..4858887   Strand: +
>XM_004869963.1
ATGAACAGCTCCCGCAGTGAGGAGTTTGACTGCTACTTCCTCGATGAGGGCTTCACAGCCAAGGACATCTTGGACCAGAAGATCAACGAGGTCTCATCCTCCGATGACAAGGACGCCTTCTATGTCGCAGACCTGGGGGACATTCTCAAGAAGCATCTGCGCTGGCTGAAAGCTCTCCCTCGAGTCACCCCCTTCTATGCAGTCAAGTGCAATGACAGCAGAGCCATTGTGAAGACCCTTGCCGCCATCGGCACGGGATTTGACTGTGCGAGCAAGACAGAGATCCAGCTGGTGCAAAGTCTTGGGGTGCCCCCAGAGAGGATCATCTACGCCAACCCCTGCAAGCAGGTGTCGCAGATCAAGTATGCGGCCAGCAGCGGGGTCCAGATGATGACCTTTGACAGTGAGGTCGAGCTGCTGAAAGTGGCCCGGGCGCACCCAAAGGCCAAGCTGGTCTTACGGATCGCCACCGACGATTCCAAAGCTGTCTGTCGCCTCAGTGTGAAATTTGGTGCCACACTCAAAACCAGCAGAGTCCTTTTGGAACGGGCAAAAGAGCTGAATATTGATGTCATCGGTGTCAGCTTCCATGTGGGGAGCGGCTGCACTGACGCTGAGACCTTTGTGCAGGCTGTGTCGGACGCGCGCTGCATCTTTGACATGGGGGCTGAGGTTGGCTTCAGCATGTATCTGCTGGACATCGGTGGGGGCTTTCCTGGATCCGAGGACGTGAAGCTGAAATTTGAAGAGATCACCAGCGTGATCAACCCTGCTCTGGACAAGTACTTCCCGGTGGACTCCGGGGTGCGCATCATCGCCGAGCCGGGCAGGTACTATGTGGCGTCAGCCTTCACCCTCGCAGTGAACATCATCGCCAAGAAGCTGGTGTGGAGGGAGCAGGCCAGCTCTGACGATGAGGAGGAGGCAAGCGAGCAGACCTTCATGTACTACGTGAACGATGGGGTCTATGGCTCATTCAACTGCATCCTGTACGACCACGCACATGTGAAGCCCCTGCTGCAGAAGAGACCCAAGCCTGATGAGAAGTACTACTCATCCAGCATCTGGGGGCCCACGTGCGACGGCCTGGATCGCATCGTGGAGCGCTGTGACCTGCCCGAGGTGCACGTGGGCGACTGGATGCTCTTTGAGAACATGGGCGCCTACACCGTTGCCGCAGCCTCCACTTTCAACGGCTTCCAGAGGCCAACCATCTACTACGTGATGTCAAGACCAGCGTGGCAGCTCATGCAGCGGGTCCAGAACCACGGCTTCCTGCCCGGTGTGGAGGAGCAGGACGTTGGCGCCCTGCCAGTGCCCTGCGCCTGCGAGAGCGAGATGAAGCGGCACCCGGCAGCGCGCACTTCCGCCAGCATCAATGTGTAG

Related Sequences

XP_004870020.1 Protein

Odc1 PREDICTED: ornithine decarboxylase [Heterocephalus glaber]

Length: 461 aa      View alignments
>XP_004870020.1
MNSSRSEEFDCYFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVKTLAAIGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEVELLKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLKTSRVLLERAKELNIDVIGVSFHVGSGCTDAETFVQAVSDARCIFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPVDSGVRIIAEPGRYYVASAFTLAVNIIAKKLVWREQASSDDEEEASEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEVHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSRPAWQLMQRVQNHGFLPGVEEQDVGALPVPCACESEMKRHPAARTSASINV