Details from NCBI annotation

Gene Symbol Tfap2b
Gene Name transcription factor AP-2 beta (activating enhancer binding protein 2 beta), transcript variant X3
Entrez Gene ID 101722192

Database interlinks

Part of NW_004624855.1 (Scaffold)

For more information consult the page for NW_004624855.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TFAP2B ENSCPOG00000022967 (Guinea pig)

Gene Details

transcription factor AP-2 beta (activating enhancer binding protein 2 beta)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016958, Guinea pig)

Protein Percentage 78.51%
CDS Percentage 77.63%
Ka/Ks Ratio 0.35822 (Ka = 0.199, Ks = 0.5556)

TFAP2B ENSG00000008196 (Human)

Gene Details

transcription factor AP-2 beta (activating enhancer binding protein 2 beta)

External Links

Gene Match (Ensembl Protein ID: ENSP00000377265, Human)

Protein Percentage 99.57%
CDS Percentage 94.13%
Ka/Ks Ratio 0.0067 (Ka = 0.0019, Ks = 0.2872)

Tfap2b ENSMUSG00000025927 (Mouse)

Gene Details

transcription factor AP-2 beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027059, Mouse)

Protein Percentage 99.56%
CDS Percentage 92.96%
Ka/Ks Ratio 0.0054 (Ka = 0.0019, Ks = 0.3577)

Tfap2b ENSRNOG00000011823 (Rat)

Gene Details

transcription factor AP-2 beta (Tfap2b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030726, Rat)

Protein Percentage 98.23%
CDS Percentage 91.39%
Ka/Ks Ratio 0.02939 (Ka = 0.0121, Ks = 0.4115)

Genome Location

Sequence Coding sequence

Length: 1398 bp    Location: 5381476..5353472   Strand: -
>XM_004869051.1
ATGCACTCACCTCCTAGAGACCAGGCTGCCATCATGCTCTGGAAGCTCGTGGAGAATGTCAAGTACGAAGATATCTATGAGGACCGGCACGATGGCGTCCCGAGTCACAGCTCGAGGCTCTCTCAGCTGGGCTCCGTGTCCCAAGGACCCTACTCCAGCGCCCCGCCACTGTCCCACACCCCGTCATCGGACTTCCAGCCCCCCTACTTCCCGCCCCCCTACCAGCCGCTCCCCTACCACCAGAGCCAAGACCCCTACTCACATGTCAACGACCCCTACTCCCTGAATCCACTGCATCAACCCCAGCAGCACCCCTGGGGACAACGGCAGCGGCAAGAAGTGGGCTCGGAAGCCGGCTCTCTGCTGCCCCAGCCTCGGGCAGCCTTGCCTCAGCTCTCAGGCCTCGACCCCAGGAGGGACTACCACTCGGTCCGCCGGCCGGACGTGCTGCTACATTCGGCGCACCACGGCCTGGACGCAGGCATGGGCGACAGCCTCTCCTTGCACAGCCTCGGCCACCCTGGCATGGAAGACGTCCAGTCAGTTGAAGATGCCAATAACAGCGGCATGAATCTATTGGACCAGTCTGTCATTAAAAAAGGAAGCCTGTCCCTATTTCCTGTTCCACCCAAATCTGTGACTTCTCTAATGATGAATAAAGATGGCTTCTTGGGAGGCATGTCGGTCAATACCGGCGAGGTATTTTGCTCAGTCCCGGGCCGTTTGTCTCTGCTCAGTTCAACCTCAAAGTATAAAGTAACTGTGGGAGAAGTTCAGAGAAGGCTTTCGCCCCCGGAATGCCTCAATGCATCTCTCCTTGGCGGCGTCCTCAGAAGAGCCAAATCGAAAAATGGGGGGAGATCTTTGCGAGAAAGGCTAGAAAAAATCGGTTTGAATTTACCCGCGGGCAGGCGCAAAGCAGCGAATGTCACGTTACTCACCTCCCTGGTGGAAGGAGAAGCTGTCCACCTAGCTCGCGATTTTGGGTACATTTGTGAAACAGAGTTTCCGGCTAAAGCTGTCTCTGAATATTTGAACAGACAGCACACGGATCCCAGTGACCTGCACTCCCGAAAGAATATGTTGCTGGCAACCAAGCAACTTTGTAAAGAATTTACGGATCTGCTGGCTCAGGACCGGACACCGATCGGGAACAGCCGGCCCAGTCCCATCCTGGAGCCGGGGATCCAGAGCTGCCTCACGCATTTCAGCCTCATCACGCACGGCTTCGGCGCCCCGGCCATTTGCGCAGCGCTCACGGCCCTGCAGAACTATCTCACCGAGGCGCTCAAAGGCATGGACAAGATGTTCTTGAACAACACCACCACTAACAGGCACACGTCTGGGGAAGGCCCAGGTAGTAAAACTGGCGACAAGGAGGAGAAACACAGGAAATGA

Related Sequences

XP_004869108.1 Protein

Tfap2b PREDICTED: transcription factor AP-2-beta isoform X3 [Heterocephalus glaber]

Length: 465 aa      View alignments
>XP_004869108.1
MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHSLGHPGMEDVQSVEDANNSGMNLLDQSVIKKGSLSLFPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK