Details from NCBI annotation

Gene Symbol Efhc1
Gene Name EF-hand domain (C-terminal) containing 1, transcript variant X1
Entrez Gene ID 101717297

Database interlinks

Part of NW_004624855.1 (Scaffold)

For more information consult the page for NW_004624855.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EFHC1 ENSCPOG00000001955 (Guinea pig)

Gene Details

EF-hand domain (C-terminal) containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001763, Guinea pig)

Protein Percentage 80.59%
CDS Percentage 84.04%
Ka/Ks Ratio 0.34467 (Ka = 0.1307, Ks = 0.3793)

EFHC1 ENSG00000096093 (Human)

Gene Details

EF-hand domain (C-terminal) containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000360107, Human)

Protein Percentage 85.6%
CDS Percentage 85.76%
Ka/Ks Ratio 0.19227 (Ka = 0.0849, Ks = 0.4415)

Efhc1 ENSMUSG00000041809 (Mouse)

Gene Details

EF-hand domain (C-terminal) containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000042343, Mouse)

Protein Percentage 79.66%
CDS Percentage 79.5%
Ka/Ks Ratio 0.1458 (Ka = 0.1215, Ks = 0.8331)

Efhc1 ENSRNOG00000042729 (Rat)

Gene Details

EF-hand domain (C-terminal) containing 1 (Efhc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017393, Rat)

Protein Percentage 79.81%
CDS Percentage 79.92%
Ka/Ks Ratio 0.15916 (Ka = 0.1217, Ks = 0.7647)

Genome Location

Sequence Coding sequence

Length: 1923 bp    Location: 3677763..3612114   Strand: -
>XM_004869034.1
ATGATGTCCAAATCGGTGCATGGCCTGCCTTTTCTCCCGGGCACATCCTTTAGGGACTCCACGAAAACAGCCTTTCATAGAAGCCAGACGCTGGGCTACAGGAATGGCTATGCAGTTGTACAACGCCCAACAGTTGGAATTGGTGGGGACGGGCTTCAGGCTAAGCAGCTGTCTCAGGCTGAGTTGGATGAGTTGGCCAGGAAAGCACCATTTCTAACTTATGGCCAAGCTAAGCAGGCTCCACCTGTAGAGTTTATTCCTGCATATGTGGCTTTTGACAAGAAGGTGCTGAAATTTGATGCTTATTTCCAAGAAAATGTTCCTATGTCAACTGAGGAACATTATAGAATTCGTCAAGTGAATATTTACTACTATCTAGAAGATGATAGCATGTCTGTCATAGAGCCAGTTGTGGAAAACTCTGGGATCCCTCAAGGCAAGTTAATCAAACGCCACTGCCTACCCAAGAATGATGTAGGAGACCATTATCATTGGAAAGACCTAAATCGAGGAATAGACATTACAATTTATGGCAAAACTTTTCGCATTGTCGACTGTGACCAATTCACACAGGAATTTTTAGAAAGTCAAGGAATTGAATTAAATCCACCAGAGAAGATGGTCCTTGACCCTTACACTGAGCTCCGGAAACAACCTCTTCGCAAGTATGTCACCCCATCGGACTTTGATCAGCTCAAGAGATTTCTCACTTTTGACAAACAAGTTCTTCGGTTCTATGCGATCTGGGATGATACTGACAACATGTTTGGTGAATGTCAGAACTACATTATTCATTACTATCTTATGGATGATACGGTGGAAATTCGAGAGGTCCATGAACGAAATGATGGGAGAGATCCTTTTCCACTTCTGATGAACCGCCAGCGCATTCCCAAGGTCTTGGTGGAGAATGCAAAGAACTTCCCTCAGTGTGTGCTAGAGATCTCTGATCAGGAAGTGTTAGAATGGTACACTGCCAAAGACTTCATTGTGGGGAAACCGCTCACTATCCTCGGGAGAACTTTCTTCATTTATGATTGCGATCAGTTTACTCGACAGTACTACAGAGAAAAGTTTGGAATCCCTGATTTACCACGCATAGATGTAAGCAAGCCGGAACCACCTCCTGTAAAACAGGAATTACCTCCGTATAATGGTTATGGACTAGTTGAAGATTCTGCTCAGAATTGCTTTGCTCTCATTCCAAAACCTCCAAAAAAAGATATTAAAATGCTGCTGAGTGACAACAAGGTGCTTCGTTATTTGGCTGCACTGGAATCCCCTATTCCAGAAGACAAAGATCGTCGATTTATCTTCTCTTATTTTCTAGCCACTGATATGATCAGTATCTTTGAGCCTCCTGTTCGGAATTCTGGTATCATTGGGGGCAAGTACCTGGGCAGGTCTAGAGTTGTGAAGCCTCTCTCTCCAGTGGACAACCCCATCTACTATGGCCCTGGTGACTTCTTCATTGGTGCTGTGATTGAGGTATTTGGCCACCGGTTCATCATCCTTGATGCAGATGAGTATGTTTTAAAATACATGGAGAGCAATGCTGCCCAGTTTTCACCAGAAGCATTCTCATCAGTTCAGAACCGTATCCAAAAGCAAGAAGCTGCTGCACCAGAGTTGGAAAACAAGCAAACTGAAGAGGATCCAGGCACACAAGAACTAGAAGCATTAATAGACACAATCCAGAAGCAACTAAAAGATCATCCATGCAAAGACAACATTCATGAAGCATTTCAAATTTATGACAAGGAAGATTCAGGATACATGGACAGAGAGACATTCTTCAAAATCTGTGATTCTCTGAATGTCCCAGTTGATGACTCTGTGGTCAAGGAGGTCAGTATGGATTGCTGTTTGGGTGACACTCACATGTGTATTTATTTTAGCTGGGGAAGATTTAGGATGTTTTAA

Related Sequences

XP_004869091.1 Protein

Efhc1 PREDICTED: EF-hand domain-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 640 aa      View alignments
>XP_004869091.1
MMSKSVHGLPFLPGTSFRDSTKTAFHRSQTLGYRNGYAVVQRPTVGIGGDGLQAKQLSQAELDELARKAPFLTYGQAKQAPPVEFIPAYVAFDKKVLKFDAYFQENVPMSTEEHYRIRQVNIYYYLEDDSMSVIEPVVENSGIPQGKLIKRHCLPKNDVGDHYHWKDLNRGIDITIYGKTFRIVDCDQFTQEFLESQGIELNPPEKMVLDPYTELRKQPLRKYVTPSDFDQLKRFLTFDKQVLRFYAIWDDTDNMFGECQNYIIHYYLMDDTVEIREVHERNDGRDPFPLLMNRQRIPKVLVENAKNFPQCVLEISDQEVLEWYTAKDFIVGKPLTILGRTFFIYDCDQFTRQYYREKFGIPDLPRIDVSKPEPPPVKQELPPYNGYGLVEDSAQNCFALIPKPPKKDIKMLLSDNKVLRYLAALESPIPEDKDRRFIFSYFLATDMISIFEPPVRNSGIIGGKYLGRSRVVKPLSPVDNPIYYGPGDFFIGAVIEVFGHRFIILDADEYVLKYMESNAAQFSPEAFSSVQNRIQKQEAAAPELENKQTEEDPGTQELEALIDTIQKQLKDHPCKDNIHEAFQIYDKEDSGYMDRETFFKICDSLNVPVDDSVVKEVSMDCCLGDTHMCIYFSWGRFRMF