Sequence details NCBI ID: XM_004868654.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Mapt
Gene Name microtubule-associated protein tau, transcript variant X1
Entrez Gene ID 101719489

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MAPT ENSCPOG00000013023 (Guinea pig)

Gene Details

microtubule-associated protein tau

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011723, Guinea pig)

Protein Percentage 90.92%
CDS Percentage 91.91%
Ka/Ks Ratio 0.25689 (Ka = 0.0484, Ks = 0.1886)

MAPT ENSG00000186868 (Human)

Gene Details

microtubule-associated protein tau

External Links

Gene Match (Ensembl Protein ID: ENSP00000340820, Human)

Protein Percentage 81.41%
CDS Percentage 84.6%
Ka/Ks Ratio 0.27984 (Ka = 0.1094, Ks = 0.3911)

Mapt ENSMUSG00000018411 (Mouse)

Gene Details

microtubule-associated protein tau

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000097919, Mouse)

Protein Percentage 91.4%
CDS Percentage 86.05%
Ka/Ks Ratio 0.07245 (Ka = 0.0438, Ks = 0.6043)

Mapt ENSRNOG00000005133 (Rat)

Gene Details

microtubule-associated protein tau (Mapt), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006856, Rat)

Protein Percentage 79.3%
CDS Percentage 81.63%
Ka/Ks Ratio 0.24083 (Ka = 0.1269, Ks = 0.5269)

Genome Location

Sequence Coding sequence

Length: 2472 bp    Location: 2420063..2319109   Strand: -
Raw sequence   
>XM_004868654.1
ATGTGGACTCGAAAATGCAGGGTCACCTGGCCTTGCGGCGTGAGTAGACACGGCAGCCGCGACTCCCAGCTCGCGGGCGCGCACAGCCCCAGCCCCGCACAGAAGCGCGCGGGGGCTGCAGGTGAGCCTTTAACTAGGATGGCTGAGCCCCGCCAGGAGTTTGACACGATGGAAGATCATGCTGGGGACTACACCCTGCTTCAAGACCGGGATGGGGACACAGAGCCTGGCCTGAAAGAGTCTCCCCTGCAGACTCCTGCTGATGATGGATCCGAGGAACCAGGCTCTGAGACCTCTGATGCTAAGAGCACTCCGACGGCCGAAGAAGTGACTGCACCTTTAGTGGATGAGAGAGCCCCTGGCAAGCAGGCTGCCGCCCAGCCCCACATGGAGATCCCAGAAGGAACCACAGCTGAAGAAGCAGGCATTGGAGACACCCCAAACCTAGAAGACCAAGCTGCTGGACATGTGACTCAAGAACCGGAGAGGGTAAAGGGTGTCCAGGAAAGCTTGCTCAGGGCACCAGGGTGCCATGGAGGTAAAGCCTCAGATCCGGGGATCCTGGGTCTCACCCTCCCGCACGTGCCCCACATGCCTAGGGCTCCCTTCCTGCCCAAAGGCCCCACAGAAGCCACACAGCAGCCTTTAGAGAAAGGACCCAACGACCTGGATAGAAGCCACCAAGGCTCTGAACTGCTGAAGCACCAGCTTTTGGGAGACCAGGACTGGAAGGGGCCCCCTCTGAAGGGGACCCAGGGCAAAGAAAGGCTGGGGGGTGACAAGGAGGTGGATGAAGATCGTGACATTGATGAATCATCACCCCAAGACTCACCTCCTTCCCAGGCCTCCCCAGCACCCAGCGGGCCACTCCCCCATGCTGCCTCCAGAGAAGCTGCTGGCATCCCTGGTTTCCCAGCCAAGGGTGCCATCCCGCTCCCTGTCAATTTCCTCTCCAAAGTTTCCACAGAGACCCTGGCCTCACCACCTGACAGGCCTGGCACAGGGCCCATGGTGGATGGGCATGGGGCTGTTCCCGAGTTCACATTCCACGTGGAAATAAAAGCTAATGTGCAGAAGGAGCGGGCATGTTCAGAGCCGGATTTGGAAGGGGCCATACTTCCGAGGGCCCGAAGAGAAGAGCAAGAGGCCTTGGGCTCTTCTGTGGAAGCCACAAAGGAGGCTGACCTTCCTGAGCCATCTGAGAAGCAGCCTGCAGCTGGTCTGCCGGGGAGATCTGTCAGCCGGGTCCCTCAACTCAAAGCTCGCATGATCAGTAAAGGCAAAGACGGAACTGGAAATGATGACAAAAAAGCAAAGACATCCACACCTTCCTGTGCTAAAACCCTGAGAAATAGGCCTTGCCTTAGCCCCACACACCCCACTCCTGGTAGCTCAGACCCTTTGATCAAACCCTCCAGCCCTGCCGTGTGCCCCGAGCCAACTTCCTCTCCTAAACACGTCCCTCCTGTCACACCCCGAACTGGCAGTTCTAGAGCAAAGGAGATAAAATTCAAGGGGGCTGATGGCAAAACTGGAACCAAGACCACTACACCCCGAGGAGCAGCCCCTCCAGGTCAGAAAGGCGCTGCCAACGCCACCAGAATTCCAGCCAAAACCACACCTACCCCAAAGACATCGCCTAGCACTGCTTCCAAGCAAGTGCAGAGAAAACTACCCCCTGCAGGGACAAAATCCAAGAGAGGTGAATCAGCAAAATCTGGGGATCGCAGTGGCTACAGCAGTCCTGGCTCCCCAGGAACCCCTGGCAGCCGCTCCCGCACCCCATCCCTGCCAACCCCACCCACCCGGGAGCCCAAGAAGGTAGCAGTGGTCCGCACTCCACCCAAGTCACCATCCTCCACCAAGAGCCGCCTGCAGACTGCCCCTGTGCCCATGCCAGACCTGAAGAACGTCAAGTCCAAGATCGGCTCTACCGAGAACCTGAAGCACCAGCCGGGAGGTGGGAAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACGTCCCGGGCGGCGGCAGTGTGCAAATAGTCTACAAACCAGTGGATCTGAGCAAGGTGACTTCCAAGTGTGGCTCATTAGGCAACATTCATCATAAACCAGGAGGTGGCCAGGTAGAAGTGAAATCTGAGAAGCTGGACTTCAAGGATAGGGTCCAGTCGAAGATCGGGTCCTTGGATAATATCACCCATGTCCCTGGTGGAGGGAATAAGAAGATCGAGACCCACAAGCTGACTTTCCGAGAGAACGCCAAAGCCAAGACAGATCACGGGGCAGAAATTGTGTACAAGTCGCCGGTGGTGTCTGGGGACACGTCTCCGAGGCACCTCAGCAATGTCTCTTCCACTGGGAGCATCAACATGGTGGACTCGCTCCAGCTCGCCACTCTAGCTGATGAGGTGTCTGCTTCCCTGGCCAAGCAGGGTTTGTGA

Related Sequences

XP_004868711.1 Protein

Mapt PREDICTED: microtubule-associated protein tau isoform X1 [Heterocephalus glaber]

Length: 823 aa      View alignments
>XP_004868711.1
MWTRKCRVTWPCGVSRHGSRDSQLAGAHSPSPAQKRAGAAGEPLTRMAEPRQEFDTMEDHAGDYTLLQDRDGDTEPGLKESPLQTPADDGSEEPGSETSDAKSTPTAEEVTAPLVDERAPGKQAAAQPHMEIPEGTTAEEAGIGDTPNLEDQAAGHVTQEPERVKGVQESLLRAPGCHGGKASDPGILGLTLPHVPHMPRAPFLPKGPTEATQQPLEKGPNDLDRSHQGSELLKHQLLGDQDWKGPPLKGTQGKERLGGDKEVDEDRDIDESSPQDSPPSQASPAPSGPLPHAASREAAGIPGFPAKGAIPLPVNFLSKVSTETLASPPDRPGTGPMVDGHGAVPEFTFHVEIKANVQKERACSEPDLEGAILPRARREEQEALGSSVEATKEADLPEPSEKQPAAGLPGRSVSRVPQLKARMISKGKDGTGNDDKKAKTSTPSCAKTLRNRPCLSPTHPTPGSSDPLIKPSSPAVCPEPTSSPKHVPPVTPRTGSSRAKEIKFKGADGKTGTKTTTPRGAAPPGQKGAANATRIPAKTTPTPKTSPSTASKQVQRKLPPAGTKSKRGESAKSGDRSGYSSPGSPGTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSSTKSRLQTAPVPMPDLKNVKSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTFRENAKAKTDHGAEIVYKSPVVSGDTSPRHLSNVSSTGSINMVDSLQLATLADEVSASLAKQGL