Sequence details NCBI ID: XM_004866873.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ap2a1
Gene Name adaptor-related protein complex 2, alpha 1 subunit, transcript variant X1
Entrez Gene ID 101715441

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AP2A1 ENSCPOG00000005104 (Guinea pig)

Gene Details

adaptor-related protein complex 2, alpha 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004592, Guinea pig)

Protein Percentage 98.16%
CDS Percentage 93.22%
Ka/Ks Ratio 0.01877 (Ka = 0.0083, Ks = 0.4404)

AP2A1 ENSG00000196961 (Human)

Gene Details

adaptor-related protein complex 2, alpha 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000351926, Human)

Protein Percentage 98.46%
CDS Percentage 92.08%
Ka/Ks Ratio 0.01064 (Ka = 0.0064, Ks = 0.6057)

Ap2a1 ENSMUSG00000060279 (Mouse)

Gene Details

adaptor-related protein complex 2, alpha 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000127842, Mouse)

Protein Percentage 98.57%
CDS Percentage 90.11%
Ka/Ks Ratio 0.00831 (Ka = 0.0062, Ks = 0.7492)

Ap2a1 ENSRNOG00000026243 (Rat)

Gene Details

adaptor-related protein complex 2, alpha 1 subunit (Ap2a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020304, Rat)

Protein Percentage 98.06%
CDS Percentage 89.56%
Ka/Ks Ratio 0.01138 (Ka = 0.0085, Ks = 0.7507)

Genome Location

Sequence Coding sequence

Length: 2937 bp    Location: 4539961..4513977   Strand: -
Raw sequence   
>XM_004866873.1
ATGCCGGCCGTGTCCAAGGGCGATGGGATGCGGGGGCTTGCGGTGTTCATCTCCGACATCCGGAACTGTAAGAGCAAAGAGGCTGAGATCAAGAGAATTAACAAGGAGCTGGCCAACATCCGGTCCAAGTTCAAAGGGGACAAGGCTTTGGATGGCTACAGCAAGAAAAAATATGTGTGCAAACTGCTCTTCATCTTCCTGCTTGGCCACGACATTGACTTCGGACACATGGAGGCTGTGAACCTGCTCAGCTCCAATAAGTACACAGAGAAGCAGATAGGTTACCTGTTCATCTCTGTGCTGGTGAACTCAAACTCGGAGCTGATCCGGCTCATCAACAACGCCATCAAGAACGACCTGGCCAGCCGCAACCCCACCTTCATGTGCCTGGCCCTGCACTGCATCGCCAACGTGGGCAGCCGGGAGATGGGCGAGGCCTTCGCTGCCGACATCCCCCGCATCCTGGTAGCTGGGGACAGCATGGACAGCGTGAAGCAGAGTGCCGCCCTGTGCCTGCTGCGCCTCTACAAGGCCTCGCCCGACCTGGTGCCCATGGGCGAGTGGACGGCGCGCGTGGTGCACTTGCTCAACGATCAGCACATGGGTGTGGTCACTGCTGCTGTGAGCCTCATCACATGTCTCTGCAAGAAGAACCCCGATGACTTCAAGACCTGCATCTCCCTGGCTGTGTCTCGCCTGAGCCGGATCGTGTCCTCAGCATCCACCGACCTCCAGGACTACACCTACTACTTCGTCCCCGCGCCCTGGCTCTCAGTGAAGCTCCTGCGGCTGCTGCAGTGCTACCCCCCGCCAGAGGACGCGGCTGTGAAGGGGCGGCTGGTGGAGAGCCTGGAGACCGTGCTTAACAAGGCCCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACTCCAACGCCAAGAACGCCATCCTCTTTGAGACCATCAGTCTCATCATCCACTACGACAGTGAGCCCAACCTCTTGGTGCGCGCCTGCAACCAGCTGGGCCAGTTCCTGCAGCACCGAGAGACCAACCTGCGCTACCTGGCACTGGAGAGCATGTGCACGCTGGCCAGCTCCGAGTTCTCCCACGAGGCCGTCAAGACCCACATCGACACCGTCATCAACGCCCTCAAGACCGAGCGGGATGTCAGCGTGCGGCAGCGAGCAGCAGATCTCCTCTACGCCATGTGTGACCGGAGCAACGCCAAGCAGATTGTGTCGGAGATGCTGCGCTACCTGGAGACAGCTGACTACGCCATCCGGGAAGAGATTGTGCTGAAGGTGGCCATCCTGGCGGAGAAGTATGCCGTGGACTACAGCTGGTACGTGGACACCATCCTCAACCTCATCCGCATCGCAGGCGACTATGTGAGTGAGGAGGTGTGGTACCGTGTGCTGCAGATTGTCACCAACCGAGATGATGTCCAGGGCTATGCTGCCAAGACTGTTTTTGAGGCCCTCCAGGCCCCAGCCTGTCACGAGAACATGGTGAAAGTCGGTGGCTACATCCTTGGGGAGTTTGGGAACCTGATTGCTGGGGATCCCCGCTCCAGCCCGCCGGTGCAGTTCTCCCTGCTGCATTCCAAGTTCCACCTGTGCAGCGTTGCAACACGGGCGCTGCTGCTGTCCACCTACATCAAGTTCATCAACCTCTTCCCTGAGACCAAGGCCACCATCCAGGGCGTGCTGCGGGCCGGCTCCCAGCTGCGCAACGCCGATGTGGAGCTGCAGCAGCGCGCCGTGGAATACCTCACCCTCAGCTCTGTGGCCAGCACCGATGTCCTGGCCACGGTGCTGGAGGAGATGCCACCCTTCCCCGAGCGCGAGTCGTCCATCCTGGCCAAGCTGAAACGAAAGAAGGGCCCAGGGGCCGCCAGCGCCCTGGATGACGGCCGGAGGGACGCCAGCAGCAGTGACATCAATGGGGCTGTGGAGCCCACCCCCAGCACCGTGTCCACCCCCTCGCCCTCTGCTGACCTCCTGGGGCTGCGGGCAGCCCCTCCCCCAGCGGCAGCCCCGGCTCCTGCCAGTGCGGGAAACCTCCTGGTGGACGTGTTCTCCGATGGCCCGGCTGCCCAGCCCAGCCTGGGCCCCACCCCCGAGGAAGCCTTCCTCAGCGAGCTGGAGCCGCCTGCCCCTGAGAGCCCCATGGCTTTGCTGGCTGACCCAGCTCCAGCTGCTGACCCAGGTCCTGAGGACATCGGCCCTCCCGTCCCAGAAGCGGATGAACTGCTGAATAAGTTTGTATGCAAGAACAACGGGGTCTTGTTCGAGAATCAGCTGCTGCAGATCGGAGTCAAATCGGAGTTCCGGCAGAACCTGGGCCGCATGTATCTCTTCTATGGCAACAAGACCTCCGTGCAGTTCCAGAACTTCTTGCCCACGGTCGTCCACCCAGGAGACCTCCAGACTCAGCTGGCTGTACAGACGAAGCGTGTGGCCGCACAGGTGGATGGTGGGGCGCAGGTGCAGCAGGTGCTCAACATAGAGTGTCTGAGGGACTTCCTGACGCCTCCGCTGCTGTCTGTGCGCTTCCGATACGGTGGTGCACCCCAGTCCCTCACCCTGAAGCTCCCGGTGACCATCAACAAGTTCTTCCAGCCCACGGAGATGGCAGCCCAGGACTTCTTCCAGCGTTGGAAGCAGCTGAGCCTCCCTCTGCAGGAGGCGCAGAAAATCTTCAAAGCCAACCACCCCATGGATGCAGAAGTCACCAAGGCCAAGCTCTTGGGGTTTGGCTCTGCCCTCCTGGACAATGTGGACCCTAACCCTGAGAACTTTGTGGGGGCCGGAATCATCCAGACGAAAGCCCTGCAGGTGGGCTGTCTGCTCCGGCTGGAGCCCAACGCCCAGGCTCAGATGTACCGGCTGACCCTGCGCACCAGCAAGGAGTCCGTCTCCCGTCACCTCTGTGAGCTTTTGGCCCAGCAGTTCTGA

Related Sequences

XP_004866930.1 Protein

Ap2a1 PREDICTED: AP-2 complex subunit alpha-1 isoform X1 [Heterocephalus glaber]

Length: 978 aa      View alignments
>XP_004866930.1
MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALHCIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCISLAVSRLSRIVSSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVESLETVLNKAQEPPKSKKVQHSNAKNAILFETISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRALLLSTYIKFINLFPETKATIQGVLRAGSQLRNADVELQQRAVEYLTLSSVASTDVLATVLEEMPPFPERESSILAKLKRKKGPGAASALDDGRRDASSSDINGAVEPTPSTVSTPSPSADLLGLRAAPPPAAAPAPASAGNLLVDVFSDGPAAQPSLGPTPEEAFLSELEPPAPESPMALLADPAPAADPGPEDIGPPVPEADELLNKFVCKNNGVLFENQLLQIGVKSEFRQNLGRMYLFYGNKTSVQFQNFLPTVVHPGDLQTQLAVQTKRVAAQVDGGAQVQQVLNIECLRDFLTPPLLSVRFRYGGAPQSLTLKLPVTINKFFQPTEMAAQDFFQRWKQLSLPLQEAQKIFKANHPMDAEVTKAKLLGFGSALLDNVDPNPENFVGAGIIQTKALQVGCLLRLEPNAQAQMYRLTLRTSKESVSRHLCELLAQQF