Sequence details NCBI ID: XM_004866445.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Actr1a
Gene Name ARP1 actin-related protein 1 homolog A, centractin alpha (yeast), transcript variant X2
Entrez Gene ID 101723337

Database interlinks

Part of NW_004624831.1 (Scaffold)

For more information consult the page for NW_004624831.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ACTR1A ENSCPOG00000011090 (Guinea pig)

Gene Details

ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009971, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 93.35%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.3283)

ACTR1A ENSG00000138107 (Human)

Gene Details

ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSP00000358921, Human)

Protein Percentage 100.0%
CDS Percentage 92.38%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.4163)

Actr1a ENSMUSG00000025228 (Mouse)

Gene Details

ARP1 actin-related protein 1A, centractin alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000039844, Mouse)

Protein Percentage 100.0%
CDS Percentage 90.78%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.5437)

Actr1a ENSRNOG00000019725 (Rat)

Gene Details

ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) (Actr1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026792, Rat)

Protein Percentage 100.0%
CDS Percentage 91.93%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.4745)

Genome Location

Sequence Coding sequence

Length: 1131 bp    Location: 1880833..1861183   Strand: -
Raw sequence   
>XM_004866445.1
ATGGAGTCCTACGATGTGATCGCCAACCAGCCTGTTGTTATCGACAACGGATCCGGTGTGATTAAAGCTGGTTTTGCTGGTGATCAGATCCCGAAGTACTGCTTTCCAAACTATGTGGGCAGACCCAAGCACGTCCGAGTCATGGCAGGAGCCCTCGAAGGAGACATCTTCATTGGCCCCAAAGCTGAGGAGCATCGAGGGCTGCTGTCCATCCGCTACCCTATGGAGCACGGCATCGTCAAGGACTGGAACGACATGGAGCGCATCTGGCAGTATGTCTACTCCAAGGACCAGCTGCAGACTTTCTCAGAGGAGCATCCTGTGCTCCTGACTGAGGCGCCTTTAAACCCACGGAAAAATCGAGAACGGGCTGCCGAAGTTTTCTTCGAGACCTTCAATGTGCCGGCCCTTTTCATCTCCATGCAAGCTGTGCTCAGCCTCTATGCCACAGGCAGGACCACAGGTGTGGTGCTGGATTCTGGGGATGGCGTCACCCATGCTGTGCCCATTTACGAGGGCTTCGCCATGCCTCACTCCATCATGCGCATTGACATCGCTGGCCGAGATGTCTCTCGCTTCCTTCGCCTCTATCTGCGCAAGGAGGGCTACGATTTCCACTCGTCCTCCGAATTTGAGATTGTCAAGGCCATAAAAGAAAGAGCCTGCTACCTGTCCATAAACCCCCAGAAGGACGAGACGCTGGAGACAGAGAAGGCTCAGTACTACCTGCCTGATGGCAGCACCATCGAGATCGGACCTTCCCGCTTTCGGGCCCCGGAGCTGCTGTTCAGGCCAGACTTGATCGGTGAGGAGAGTGAGGGCATCCATGAGGTCCTGGTGTTCGCCATCCAGAAGTCTGATATGGACCTGCGGCGCACCCTGTTCTCCAACATTGTCCTCTCAGGAGGCTCCACCCTGTTCAAAGGTTTTGGTGACAGGCTCCTCAGTGAAGTGAAGAAACTGGCTCCCAAAGACGTGAAGATCAGGATATCTGCGCCACAGGAGAGACTGTATTCCACGTGGATTGGGGGCTCGATCCTTGCCTCGCTGGACACCTTTAAGAAGATGTGGGTCTCCAAGAAGGAATATGAGGAAGATGGTGCCCGCTCCATCCACAGGAAAACCTTCTAA

Related Sequences

XP_004866502.1 Protein

Actr1a PREDICTED: alpha-centractin isoform X2 [Heterocephalus glaber]

Length: 376 aa      View alignments
>XP_004866502.1
MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF