Details from NCBI annotation
| Gene Symbol |
Npnt |
|
Gene Name
|
nephronectin, transcript variant X5 |
| Entrez Gene ID |
101718545
|
Database interlinks
Part of NW_004624830.1 (SequenceType object (1))
Potential Gene Matches
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Gene Details
nephronectin
External Links
Gene Match(Ensembl Protein ID:ENSCPOP00000006033, Guinea pig)
| Protein Percentage |
83.84% |
| CDS Percentage |
85.14% |
| Ka/Ks Ratio |
0.16498 (Ka = 0.0872, Ks = 0.5286) |
Gene Details
nephronectin
External Links
Gene Match(Ensembl Protein ID:ENSP00000389252, Human)
| Protein Percentage |
80.67% |
| CDS Percentage |
79.2% |
| Ka/Ks Ratio |
0.13263 (Ka = 0.1107, Ks = 0.8345) |
Gene Details
nephronectin
External Links
Gene Match(Ensembl Protein ID:ENSMUSP00000040071, Mouse)
| Protein Percentage |
80.36% |
| CDS Percentage |
79.05% |
| Ka/Ks Ratio |
0.12027 (Ka = 0.1103, Ks = 0.9174) |
Gene Details
nephronectin
External Links
| Protein Percentage |
74.59% |
| CDS Percentage |
74.04% |
| Ka/Ks Ratio |
0.1289 (Ka = 0.165, Ks = 1.2802) |
Sequence SequenceType object (2)
Length: 1713
bp
Location: 2943593..2881948
Strand: -
>XM_004866244.1
ATGCCGCCGCCGCCGCTGCTGCTGCTGCCTGCGCTCGCGCTCGCGGTCTCCTTGTCCCTGCGGGCGGCCGCCGACTTCGACGGGAGGTGGCCCGGACAGCTCGTGTCCTCGATTGGCCTCTGTCGCTATGGTGGGCGGATTGACTGCTGCTGGGGCTGGACTCGCCGCTCCTGGGGACAGTGCCAACCCGTGTGCCACCCGCAGTGCAAGCATGGCGAATGTGTTGGGCCGAACAAGTGCAAGTGCCACCCTGGATATGCCGGGAAAACCTGCAGTCAAGACCTGAACGAGTGTGGCCTGAAGCCGCGGCCCTGCAAGCACCGCTGCATGAACACGCTCGGAAGCTACAAGTGCTACTGCCTCAGCGGCCACATGCCCATGCCCGACGGCTCCTGCGCAAGTGCCCTGTCGTGCTCCATGGCAAACTGTCAGTACGGCTGTGACGTTGTCAAAGGACAGGTGCGATGCCAGTGCCCCTCCCCGGGCCTGCGGCTGGCTCCTGACGGGAGGACCTGTGTGGATATTGATGAATGCACCACGGGAAGAGTGTCCTGCCCCAGGTTCAGGCAGTGTGTCAACACCTTCGGGAGTTACATCTGCAAGTGTCACAAAGGCTTCGAGCTCTTGTACATCGGAGGCAAATACCAGTGTCACGATACAGATGAGTGTGCCCTCGGGCAGCACCAGTGCAGTGGCTTTGCCCGGTGCTACAACGTGCACGGCTCGTACGTGTGCAAGTGTGTCAAGGGTTACCAGGGCGACGGGCTGAGCTGCGTGTATATTCCCAAAGTCATGATCGAACCTTCAGGTCCAATTCACGGACTGCAGGGAAACAGGACCATTATAAAGGGCGATGGAGGACAAAGCAATTGGATCCCCGAGGCCGGCAGTACCAGGGGGCCTCCGAGGACACCATCTGTCCCTCCTGGCCTTCCCAGCAGCCCCACCCCTCGGCCAACTGCAAGACCTACGCTGAGGCCAACACCACAGCCAACTCCTCCGCCGCCGCCCGCCCTGCCAACGCAGCTCAGAGCTCCTCCGCCGCCACCAACCCCAGAACTGCCAAGAACCAGGCTGACAACCACAGCTCCGGCCGATGGCACCTCCGCGCCGGGGGTCACAGTGGACAACAGGATACACACGGACCCGCAGAAGCCCAGAGGAGATGTGTTCATCCCACGGCAGCCCTCCAATGACCTGTTGGAGATATTCGAGATCGAGAGAGGAGTCAGCGCCGACGATGACGAAGCGAAGGACGACCCAGGTGTCCTCGTGCATAGCTGCAACTTTGACCACGGCCTCTGCGGATGGATCAGGGAGAAGGACAGTGACTCGCACTGGGAACCGGCCCGGGACCCGGCAGGTGGGCAGTACCTGACCGTGGCGGCCAAGGCCCCCGAGGGAAGAGCCGCACGCCTGGTGCTGCCGCTGGGCCACCTCCTGCGTTCAGGGGATGTGTGCCTGTCCTTCAGGCACAAGGTGACCGGGCTGCACTCGGGCACGCTGCAGGTGTCTGTAAGGAGACATGGCGGGCACGGGGTGGCCCTGTGGGGCAGAGACGGCGGCCGAGGCTGGAGGCAGACACAGATCACCCTGCGGGGCTCGGACATCAAGAGCGTCATCTTCAAGGGTGAAAGGCAGCGTGGCCACCCCGGGGAGATCGCGTTGGATGACGTGAGCTTGCGAAGGGGCCCCTGCTCCGAAGAGCGCTAG
Related Sequences
Npnt PREDICTED: nephronectin isoform X5 [Heterocephalus glaber]
Length: 570
aa
View alignments>XP_004866301.1
MPPPPLLLLPALALAVSLSLRAAADFDGRWPGQLVSSIGLCRYGGRIDCCWGWTRRSWGQCQPVCHPQCKHGECVGPNKCKCHPGYAGKTCSQDLNECGLKPRPCKHRCMNTLGSYKCYCLSGHMPMPDGSCASALSCSMANCQYGCDVVKGQVRCQCPSPGLRLAPDGRTCVDIDECTTGRVSCPRFRQCVNTFGSYICKCHKGFELLYIGGKYQCHDTDECALGQHQCSGFARCYNVHGSYVCKCVKGYQGDGLSCVYIPKVMIEPSGPIHGLQGNRTIIKGDGGQSNWIPEAGSTRGPPRTPSVPPGLPSSPTPRPTARPTLRPTPQPTPPPPPALPTQLRAPPPPPTPELPRTRLTTTAPADGTSAPGVTVDNRIHTDPQKPRGDVFIPRQPSNDLLEIFEIERGVSADDDEAKDDPGVLVHSCNFDHGLCGWIREKDSDSHWEPARDPAGGQYLTVAAKAPEGRAARLVLPLGHLLRSGDVCLSFRHKVTGLHSGTLQVSVRRHGGHGVALWGRDGGRGWRQTQITLRGSDIKSVIFKGERQRGHPGEIALDDVSLRRGPCSEER