Sequence details NCBI ID: XM_004865679.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101710908

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LONP1 ENSCPOG00000022470 (Guinea pig)

Gene Details

lon peptidase 1, mitochondrial

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019576, Guinea pig)

Protein Percentage 84.36%
CDS Percentage 84.29%
Ka/Ks Ratio 0.09926 (Ka = 0.0934, Ks = 0.9413)

LONP1 ENSG00000196365 (Human)

Gene Details

lon peptidase 1, mitochondrial

External Links

Gene Match (Ensembl Protein ID: ENSP00000353826, Human)

Protein Percentage 82.97%
CDS Percentage 82.13%
Ka/Ks Ratio 0.0932 (Ka = 0.1058, Ks = 1.1354)

Lonp1 ENSMUSG00000041168 (Mouse)

Gene Details

lon peptidase 1, mitochondrial

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041814, Mouse)

Protein Percentage 81.38%
CDS Percentage 77.92%
Ka/Ks Ratio 0.07529 (Ka = 0.123, Ks = 1.6338)

Lonp1 ENSRNOG00000046502 (Rat)

Gene Details

lon peptidase 1, mitochondrial (Lonp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066618, Rat)

Protein Percentage 81.5%
CDS Percentage 77.31%
Ka/Ks Ratio 0.06762 (Ka = 0.1246, Ks = 1.8426)

Genome Location

Sequence Coding sequence

Length: 2958 bp    Location: 4494775..4516793   Strand: +
Raw sequence   
>XM_004865679.1
ATGGCCAAGCCATGGCGGCGAGCACAGGCTACGTGCGCCTGTGGGCCGCGGCACGGTGCTGGGCACTGCGGCGGCCTCTCTTGGTGCCGCCGGGGGGCGGCTCCCGACTGCAACTGGAGTGTGGTTACTGAGAGGCCGGCGGGCCTGCGACGCCATACCTCCTTGGGCGCTTTGGGCCACTGGCCGGCCACCGCAGGCCAGTGGCGAGGGATTTGGGAGGCGAATAGCCGCGGCGGCGGGGGGGCGTTCTCCGGAGGCGGGGATGCCTCCGAGGGAGGCGCGGAGGAAGGAGCCGGGGGCGTAGGGGGCGGCACAGGCAGCGGGGAAGGCCCCGTCGTCACGGCGCTCACGCCCATGACGATCCCGGACGTGTTCCCGCACCTCCCGCTTATCGCCATCACCCGCAACCCGGTGTTCCCGCGCTTTATCAAGATTGTCGAGGTTAAAAATAAGAAGTTGGTTGAGCTGCTAAGAAGGAAGGTTCGACTTGCCCAGCCCTATGTCGGCGTCTTTCTAAAGAGAGATGACAACAATGAGTCTGATGTGGTCGAAAGCCTGGATGAGATCTATCACACGGGGACGTTTGCCCAGATCCATGAGATGCAGGACCTGGGGGACAAGCTGCGCATGATTGTCACAGGACATAGAAGGATCCATATCAACCGACAGCTGGAAGTGGAGCCTGAGGAGGCTGAGCTGGAGAACAGACAGAAGCCCCGCAGGAAGGCCAAGCGGGGGAAGAAGGAGGCGGAGGACGAGCTGAGCCCCAGCACTCCGAGGGAGGTGGGGCAGGAGCCGGCCACTGAGGCCGCCGGGGAGGTGCTCATGGTAGAGGTCGAGAATGTGGTCCACGAAGACTTTCAGGTCACTGAAGAAGTGAAAGCCCTGACCGCAGAGATCGTGAAGACCATCCGGGACATCATCGCCTTGAACCCGCTGTACAGAGAGTCGGTGTTGCAGATGATGCAGGCTGGCCAGCGGGTGGTGGACAACCCCATCTATCTGAGCGACATGGGCGCCGCACTCACCGGGGCTGAGTCCCACGAGCTGCAGGACGTCCTAGAGGAGGCCAACATCCCCAAGCGGCTGTACAAGGCACTGTCCTTGCTGAAGAAGGAGTTCGAGCTCAGCAAGCTACAACAGCGCCTGGGCAGGGAGGTGGAGGAGAAGATCAAGCAGACGCATCGCAAGTACCTGCTGCAGGAGCAGCTGAAGATCATCAAAAAGGAGCTGGGCCTGGAGAAGGACGACAAGGACGCCATTGAGGAGAAGTTCCGTGAGCGGCTTCGGGAGCTGGTGGTGCCCAAGCATGTCATGGATGTAGTGGACGAGGAGCTGAGCAAGCTGGGCCTGCTGGACAACCACTCCTCGGAGTTCAATGTCACCCGCAACTACCTGGACTGGCTCACATCTGTCCCGTGGGGCAGGCACAGTGATGAGAATCTGGACCTGAGCCGGGCCCAGGCGGTCCTGGAGGAGGACCACTACGGCATGGAGGACGTCAAGAGGCGCATCCTGGAGTTCATCGCCGTCAGCCAGCTCCGCCGCTCCACCCAGGGCAAGATCCTCTGCTTCTACGGCCCTCCTGGTGTAGGCAAGACCAGCATTGCGCGCTCCATTGCCCGCGCCCTCAACCGCGAGTACTTCCGCTTCAGTGTGGGGGGCATGACTGACGTGGCTGAGATCAAGGGGCACAGGCGGACCTACGTGGGTGCCATGCCCGGGAAGATCATCCAGTGCCTGAAGAAGACGAAGACTGAGAACCCCCTGGTGCTGATAGATGAGGTGGACAAGATTGGCCGTGGCTACCAGGGGGACCCGTCATCGGCACTGCTGGAGCTGCTGGACCCTGAGCAGAATGCCAACTTCCTGGACCACTACCTGGATGTGCCTGTGGACCTGTCCAAGGTGTTGTTCATCTGCACGGCCAACGTCACTGACACCATCCCCGAGCCACTGCGCGACCGCATGGAGATGATCAACGTGTCCGGCTATGTGGCCCAGGAGAAGCTGGCCATAGCCGAGCGGTACCTGGTGCCCCAGGCACGGGCCCTGTGCGGCCTGGATGAGAGCAGGGCCAGGCTGTCGGCGCCCGTGCTGACGCTGCTCATCAAGCAGTACTGCCGCGAGAGTGGAGTGCGCAACCTGCAGAAGCAGGTGGAGAAGGTGCTTCGAAAGGCGGCCTACAAGATCGTGAGCGGTGAGGCCGAGACGGTGGAGGTGACCCCTGAAAACCTGCAGGACTTCGTGGGCAAGCCGGTGTTCACAGTGGAGCGCATGTACGACGCCACGCCGCCCGGCGTGGTCATGGGCCTGGCCTGGACCGCCTTGGGAGGCTCCACATTGTTTGTTGAGACATCCCTGCGGCGGCCGAGGGACAGGGACAGCAAGGAGAACAAGGACGGCTCACTGGAGGTGACCGGCCAGCTGGGGGATGTGATGAAGGAGAGCGCGCGCATCGCCTACACCTTCGCCAGGGCCTTCCTGCTGCAGCGCGACCCCAGCAACGACTACCTGGTGACCTCACACATCCACCTGCACGTACCAGAGGGCGCCACTCCCAAGGACGGGCCCAGTGCTGGCTGTACCATTGTCACGGCCCTGCTGTCCCTAGCCCTGGACCAGCCTGTGCAGCAGGACCTGGCCATGACAGGCGAGGTGTCCCTCACGGGCAAGATCCTGCCGGTGGGAGGCATCAAGGAGAAGACGATTGCGGTGAGGGTTCCCTGCCACTGCTCCCGTCCTGGGGGTGCCATGGTGACAAGCGAGCCGGGTGCTGTCCCGGCTGCCCCCACCCAGTTCCTATCACCCCACAAGTGCCCACTTGCCTGGGGGGGCCCATATGGGGAGGGCTGCACGGGGTTTTTGGGCAGGGACCCTGAGGCCTCCCCTTGCACTGTAAATGGGGGGTGTTCATGGGGCCAGTGCTTCCTGTCTCTGGAGCTGCCCAGTGCTTGA

Related Sequences

XP_004865736.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: lon protease homolog, mitochondrial [Heterocephalus glaber]

Length: 985 aa      View alignments
>XP_004865736.1
MAKPWRRAQATCACGPRHGAGHCGGLSWCRRGAAPDCNWSVVTERPAGLRRHTSLGALGHWPATAGQWRGIWEANSRGGGGAFSGGGDASEGGAEEGAGGVGGGTGSGEGPVVTALTPMTIPDVFPHLPLIAITRNPVFPRFIKIVEVKNKKLVELLRRKVRLAQPYVGVFLKRDDNNESDVVESLDEIYHTGTFAQIHEMQDLGDKLRMIVTGHRRIHINRQLEVEPEEAELENRQKPRRKAKRGKKEAEDELSPSTPREVGQEPATEAAGEVLMVEVENVVHEDFQVTEEVKALTAEIVKTIRDIIALNPLYRESVLQMMQAGQRVVDNPIYLSDMGAALTGAESHELQDVLEEANIPKRLYKALSLLKKEFELSKLQQRLGREVEEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFRERLRELVVPKHVMDVVDEELSKLGLLDNHSSEFNVTRNYLDWLTSVPWGRHSDENLDLSRAQAVLEEDHYGMEDVKRRILEFIAVSQLRRSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSALLELLDPEQNANFLDHYLDVPVDLSKVLFICTANVTDTIPEPLRDRMEMINVSGYVAQEKLAIAERYLVPQARALCGLDESRARLSAPVLTLLIKQYCRESGVRNLQKQVEKVLRKAAYKIVSGEAETVEVTPENLQDFVGKPVFTVERMYDATPPGVVMGLAWTALGGSTLFVETSLRRPRDRDSKENKDGSLEVTGQLGDVMKESARIAYTFARAFLLQRDPSNDYLVTSHIHLHVPEGATPKDGPSAGCTIVTALLSLALDQPVQQDLAMTGEVSLTGKILPVGGIKEKTIAVRVPCHCSRPGGAMVTSEPGAVPAAPTQFLSPHKCPLAWGGPYGEGCTGFLGRDPEASPCTVNGGCSWGQCFLSLELPSA