Details from NCBI annotation

Gene Symbol Apex1
Gene Name APEX nuclease (multifunctional DNA repair enzyme) 1, transcript variant X4
Entrez Gene ID 101709711

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624825.1 (Scaffold)

For more information consult the page for NW_004624825.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APEX1 ENSCPOG00000014462 (Guinea pig)

Gene Details

APEX nuclease (multifunctional DNA repair enzyme) 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013028, Guinea pig)

Protein Percentage 97.17%
CDS Percentage 94.86%
Ka/Ks Ratio 0.08157 (Ka = 0.0135, Ks = 0.1655)

APEX1 ENSG00000100823 (Human)

Gene Details

APEX nuclease (multifunctional DNA repair enzyme) 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000216714, Human)

Protein Percentage 94.34%
CDS Percentage 89.41%
Ka/Ks Ratio 0.06777 (Ka = 0.0283, Ks = 0.418)

Apex1 ENSMUSG00000035960 (Mouse)

Gene Details

apurinic/apyrimidinic endonuclease 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000042602, Mouse)

Protein Percentage 94.64%
CDS Percentage 87.7%
Ka/Ks Ratio 0.05027 (Ka = 0.027, Ks = 0.5378)

Apex1 ENSRNOG00000009663 (Rat)

Gene Details

APEX nuclease (multifunctional DNA repair enzyme) 1 (Apex1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013176, Rat)

Protein Percentage 93.69%
CDS Percentage 86.86%
Ka/Ks Ratio 0.05288 (Ka = 0.0314, Ks = 0.5941)

Genome Location

Sequence Coding sequence

Length: 957 bp    Location: 4714914..4711926   Strand: -
>XM_004865002.1
ATGCCAAAGCGGGGGAAAAAGGGATCAGTGGCCGAAGATGGGGAAGAGCCCAAGAGAGAGCCAGAGGCCAAGAAAAGTAAGGTGGGAGCAAAGAAAAACGAAAAAGAGGCAGCAGGAGATGGCCCAGTTCTGTATGAAGATCCTCCAGATAAGAAAACCTCACCTAGTGGCAAATCTGCCACACTGAAGATATGCTCCTGGAATGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAGGGTTTAGATTGGGTAAAGGAAGAAGCCCCGGATATCCTGTGCCTCCAAGAGACCAAATGTTCAGAGAACAAACTCCCAGCTGAGCTTCAAGAGCTATCTGGACTATCCCATCAGTACTGGTCAGCGCCTTCTGACAAGGAAGGATATAGTGGTGTGGGTCTACTCTCCCGCCAGTGCCCACTCAAAGTCACTTATGGCATTGGTGAAGAGGAACATGACCAGGAAGGCCGGGTGATTGTGGCTGAATTTGACTCATTTGTGCTGGTTACAGCCTATGTACCTAATGCAGGCCGGGGTCTGGTAAGGTTGGAGTACAGGCAGCGCTGGGATGAAGCCTTTCGCAAGTTCCTGAAGGGCTTGGCTTCCCGAAAGCCTCTTGTACTGTGTGGGGACCTCAATGTGGCTCATGAAGAAATTGACCTTCGTAACCCCAAGGGAAACAAAAAGAATGCTGGCTTCACCCCACAGGAGCGCCAAGGCTTTGGGGAACTGCTGCAGGCCGTGCCACTGACCGACAGCTTTCGTCACCTCTACCCTAATGCTGCTTATGCCTACACTTTTTGGACTTACATGATGAATGCTCGGTCCAAGAATGTAGGTTGGCGCCTTGATTACTTTTTGTTGTCCCATTCGCTTTTACCTGCATTGTGTGACAGCAAGATCCGTTCCAAGGCTCTTGGCAGTGATCACTGTCCCATCACCCTGTACTTAGCACTGTGA

Related Sequences

XP_004865059.1 Protein

Apex1 PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform X4 [Heterocephalus glaber]

Length: 318 aa      View alignments
>XP_004865059.1
MPKRGKKGSVAEDGEEPKREPEAKKSKVGAKKNEKEAAGDGPVLYEDPPDKKTSPSGKSATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVTYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLYPNAAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL