Details from NCBI annotation

Gene Symbol Des
Gene Name desmin, transcript variant X1
Entrez Gene ID 101716469

Database interlinks

Part of NW_004624823.1 (Scaffold)

For more information consult the page for NW_004624823.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DES ENSCPOG00000002458 (Guinea pig)

Gene Details

desmin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002239, Guinea pig)

Protein Percentage 92.96%
CDS Percentage 91.68%
Ka/Ks Ratio 0.11153 (Ka = 0.0409, Ks = 0.3669)

DES ENSG00000175084 (Human)

Gene Details

desmin

External Links

Gene Match (Ensembl Protein ID: ENSP00000363071, Human)

Protein Percentage 95.95%
CDS Percentage 92.04%
Ka/Ks Ratio 0.03176 (Ka = 0.0168, Ks = 0.5302)

Des ENSMUSG00000026208 (Mouse)

Gene Details

desmin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027409, Mouse)

Protein Percentage 96.16%
CDS Percentage 90.97%
Ka/Ks Ratio 0.02766 (Ka = 0.0162, Ks = 0.5875)

Des ENSRNOG00000019810 (Rat)

Gene Details

desmin (Des), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026860, Rat)

Protein Percentage 96.8%
CDS Percentage 90.76%
Ka/Ks Ratio 0.02078 (Ka = 0.0134, Ks = 0.6469)

Genome Location

Sequence Coding sequence

Length: 1524 bp    Location: 5632243..5624958   Strand: -
>XM_004864525.1
ATGAGCCAGGCCTACTCTTCCAGCCAGCGCGTGTCCTCCTACCGCCGCACCTTCGGCGGGGCCCCGGGCTTCTCGCTCGGCTCCCCGCTGAGCTCGCCCGTGTTCCCTCACTCAGGCTTTGGCACCAAGGGCTCCTCGAGCTCGGTGACATCCCGCGTGTACCAAGTGTCGCGCACGTCGGGCGGGGCTGGGGGCCTGGGGTCGCTGCGGGCCAGCCGGCTGGGGGCGACCCGCGCGCCCTCCTACGGCGCGGGCGAGATGCTGGACTTCTCGCTGGCCGATGCCGTGAACCAGGAGTTCCTGACCACGCGCACCAACGAGAAGGTGGAGCTGCAGGAGCTCAATGACCGCTTCGCCAACTACATCGAGAAGGTGCGCTTCCTGGAGCAGCAGAACGCCGTGCTCGCCTCCGAGGTGAACCGCCTCAAGGGCCGCGAGCCCACGCGCATCGCCGAGCTCTACGAGGAGGAGATGCGCGAGCTGCGGCGCCAGGTGGAGGTGCTCACCAACCAGCGCGCCCGCGTGGACGTCGAGCGCGACAACCTGATCGACGAACTGCAGCGGCTCAAGGCCAAGCTGCAAGAAGAGATTCAGCTGAAAGAAGAAGCAGAGAACAATTTGGCGGCCTTCCGTGCAGTAAGCTGTCTTTGTTACCCCTGCAGTCTTCTCCTTTCTATCCCCCCCTGGCCAGCCTCCCTCTGCCCATCTGGGCTGTCTGTGAGCCTGTCCTTGTTGTCTGACCTTTCCCAGGATGTAGATGCAGCCACTCTAGCGCGTATTGACCTGGAGCGCAGAATCGAATCTCTCAACGAGGAAATTGCGTTCCTTAAGAAAGTGCACGAAGAGGAGATCCGTGAGCTGCACGCCCAGCTTCAGGAACAGCAAATCCAGGTGGAGATGGACACGTCCAAGCCAGACCTTACAGCCGCCCTCAGGGACATCCGGGCTCAGTACGAGACCATCGCAGCTAAGAACATCTCTGAAGCTGAGGAGTGGTACAAGTCCAAGGTATCTGACCTGACCCAGGCTGCCAACAAGAACAATGATGCACTGCGCCAGGCCAAGCAGGAGATGATGGAATACCGACACCAGATCCAGTCCTACACATGCGAGATTGATGCCCTCAAGGGCACCAACGATTCCCTGATGAGGCAGATGCGCGAGCTGGAGGACCGCTATGCCAGTGAGGCCAGTGGATACCAGGACAGCATCGCACGCCTGGAGGAGGAGATCCGGCACCTCAAGGACGAAATGGCCCGACACCTGCGTGAGTACCAGGACCTGCTCAATGTGAAGATGGCCCTGGATGTGGAGATTGCTACCTACCGGAAGCTGCTGGAGGGCGAGGAGAGCCGGATTAACCTTCCTATCCAGACCTTCTCTGCTCTCAACTTCCGAGAAACCAGCCCGGAGCAAAGGGGCTCCGAGGTCCACACCAAGAAGACAGTGATGATCAAGACCATCGAGACTCGGGATGGGGAGGTCGTCAGTGAGGCCACACAGCAGCAGCATGAAGTGCTGTAA

Related Sequences

XP_004864582.1 Protein

Des PREDICTED: desmin isoform X1 [Heterocephalus glaber]

Length: 507 aa      View alignments
>XP_004864582.1
MSQAYSSSQRVSSYRRTFGGAPGFSLGSPLSSPVFPHSGFGTKGSSSSVTSRVYQVSRTSGGAGGLGSLRASRLGATRAPSYGAGEMLDFSLADAVNQEFLTTRTNEKVELQELNDRFANYIEKVRFLEQQNAVLASEVNRLKGREPTRIAELYEEEMRELRRQVEVLTNQRARVDVERDNLIDELQRLKAKLQEEIQLKEEAENNLAAFRAVSCLCYPCSLLLSIPPWPASLCPSGLSVSLSLLSDLSQDVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELHAQLQEQQIQVEMDTSKPDLTAALRDIRAQYETIAAKNISEAEEWYKSKVSDLTQAANKNNDALRQAKQEMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRYASEASGYQDSIARLEEEIRHLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLPIQTFSALNFRETSPEQRGSEVHTKKTVMIKTIETRDGEVVSEATQQQHEVL