Sequence details NCBI ID: XM_004863786.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Mmel1
Gene Name membrane metallo-endopeptidase-like 1, transcript variant X1
Entrez Gene ID 101723792

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MMEL1 ENSCPOG00000010003 (Guinea pig)

Gene Details

membrane metallo-endopeptidase-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008977, Guinea pig)

Protein Percentage 86.49%
CDS Percentage 90.35%
Ka/Ks Ratio 0.15442 (Ka = 0.0625, Ks = 0.4047)

MMEL1 ENSG00000142606 (Human)

Gene Details

membrane metallo-endopeptidase-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000367668, Human)

Protein Percentage 82.5%
CDS Percentage 85.33%
Ka/Ks Ratio 0.10567 (Ka = 0.0911, Ks = 0.8617)

Mmel1 ENSMUSG00000058183 (Mouse)

Gene Details

membrane metallo-endopeptidase-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000131753, Mouse)

Protein Percentage 77.78%
CDS Percentage 80.7%
Ka/Ks Ratio 0.10548 (Ka = 0.1264, Ks = 1.1984)

Mmel1 ENSRNOG00000012593 (Rat)

Gene Details

membrane metallo-endopeptidase-like 1 (Mmel1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017957, Rat)

Protein Percentage 78.01%
CDS Percentage 81.11%
Ka/Ks Ratio 0.1117 (Ka = 0.1233, Ks = 1.1038)

Genome Location

Sequence Coding sequence

Length: 2343 bp    Location: 7453186..7482499   Strand: +
Raw sequence   
>XM_004863786.1
ATGGGGAAGCCAGAAAGCCCGGCGGGGATGGTGGACAGAGCCGGCTGGGCAGTGCAGAGGCGCCGAGGCTTCCTGGAGAGGGGGCTGCTGCTCCTGCTCCTGCTGGTGACGGGCGCCCTGGTGGCCCTGGGCGTCCTCTACAGCCGAGGGAAGCAGCTGCCCCCCTTTACGAGCTGGCTGTCCTCCTTACAGGAAGAGAGGACCGTTGTAAAACAAGAGTCCCGAGATATCCCTCCCCTCCGGAAGCCCACGCGGGTGGAAGAGGTCTGCACCAGCCCTGGCTGCGTGGTGGCGGCTGCCAGGATCCTCCAAAACATGGACCCGTCCACGGAACCGTGCAGCAACTTTTACCAGTACGCGTGCGGGGGCTGGCTGCGGCGCCATGTGATCCCTGAGACCAGTTCCCACTACAGCGTCTTCGATATCCTCCGAAACGAGGTGGAGGTCATCCTCAAAGGGGTGCTGGAGAATTCCACTGCCAAGTCCCGGCCAGCCGTGGAGAAGGCGAAGCTGCTGTACCGCTCCTGCATGAACCAGAGCATGATAGAGAAGCGAGACTCTCAGCCCCTTCTGGACGTCTTGGCGGTGGTGGGAGGCTGGCCGGTGGCCATGGACAAGTGGAACCAGACCATAGGCCCCACGTGGGAGCTGGAGCGGCAGCTGGCGGTGATGAACACACAGTTCAACCGGCGGGTCCTCATCGACCTCTTCGTGTGGAATGACGACCTGAACTCCAGCCGCCACATCATCTACATAGACCAGCCCACGCTGGGCATGCCGTCCCAGGAGTACTACATCAAGGAGGGCAGCAACCAGAAGGTGCGGGACGCCTACCTGCAGTTCATGACATCGGTGGCCACCATGCTGCGGAGGGACAACAAGCTGCCTGGGGACACCCACCTGGTGCAGGAGGACATGGCGCAGGTGCTGGAGCTGGAGACTCACCTGGCCAACGCCACCACACCCCCAGAGGAGAGGCAAGATATCACCGAACTATACCACAGGATGGACCTGCAGCAGCTCCAGGACAGGTTCAGCCTGAAGGGTTTTAACTGGACTCTCTTCATACAAACTGTGCTGTCCTCCGTCAAAATCGAGCTGCTGCCCAATGAGGAAGTAGTGGTCTATGGCATCCCCTACCTGGAGAAGCTCGAGAACATCATCGACCTCTACTCGGCCAGGACCATGCAGAACTATCTGGTCTGGCGCCTGGTGCTGGATCGCATCAGCAGCCTGAGCCAGCGGTTCAAGGATGCCCGGGTAAACTACCGCAAGGTGCTGTACGGCACCACGGTGGAGGAGGTGCGCTGGCGGGAGTGCGTCGGCTACGTCAACAGCAACATGGAGAGCGCCGTGGGCTCCCTGTATGTCAAGGAGGCCTTCCCCGGGGACAGCAAGAACATGGTCAGAGAGCTCATCAAGAAGGTGCAGGCCATGTTCGTGGAGACCCTGGACGAGCTGGGCTGGATGGACGAGGAATCCAAGAAGAAGGCCCAGGAGAAGGCCATGAGCATCCAGGAGCAGGTCGGCTACCCCACCTACATCCTTGAGGAAAGCAACAGGCGCCTGGACCAGGAGTATTCCAGCCTGAACTTCTCGGAGGACTTGTACTTCGAGAACACACTGCAGAACCTCAAGGCCAGCGCTCACAGGAGCCTCAGGAAGCTTCGGAAAAAGGTGGACCAGAATCTCTGGATCATTGGGGCCGCAGTGGTCAACGCGTTCTACTCCCCGAACCGAAACCAGATCGTGTTCCCCGCCGGGATCCTCCAACCACCGTTTTTCAGCAAGGAGCAGCCACAGGCCTTGAACTTCGGGGGCATTGGGATGGTGATCGGGCATGAAATCACGCATGGCTTTGATGACAATGGCCGGAACTTTGACAAGAACGGCAATATGCTAGACTGGTGGAGCAACTCCTCGGCCCAGCACTTCCGAGAGCAGTCGGAGTGCATGATCCACCAGTACAGCAACTACAGCTGGGACCTGGCCGGGAGCCAGCACGTGAATGGATTCAGCACCCTCGGGGAAAACATCGCTGACAACGGAGGGGTGCGCCAGGCATTCAAGGCCTACCTAAAGTGGATGGCGGAAGGTGGCAAGGACCAGCTGCTGCCAGGGCTGGAGCTCACCTACAAACAGCTTTTCTTTGTCAACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCAGAGTTCGCCATCCAGTCCATCAAGACTGACGTCCACAGCCCCCTGAAGTACAGGGTGCTAGGCTCCCTGCAGAACCTGCCTGCCTTCGCTGATGCGTTCCACTGCCCCCGGGGCACCCCCATGCACCCCAAGGAGCGATGCCGCATCTGGTAG

Related Sequences

XP_004863843.1 Protein

Mmel1 PREDICTED: membrane metallo-endopeptidase-like 1 isoform X1 [Heterocephalus glaber]

Length: 780 aa      View alignments
>XP_004863843.1
MGKPESPAGMVDRAGWAVQRRRGFLERGLLLLLLLVTGALVALGVLYSRGKQLPPFTSWLSSLQEERTVVKQESRDIPPLRKPTRVEEVCTSPGCVVAAARILQNMDPSTEPCSNFYQYACGGWLRRHVIPETSSHYSVFDILRNEVEVILKGVLENSTAKSRPAVEKAKLLYRSCMNQSMIEKRDSQPLLDVLAVVGGWPVAMDKWNQTIGPTWELERQLAVMNTQFNRRVLIDLFVWNDDLNSSRHIIYIDQPTLGMPSQEYYIKEGSNQKVRDAYLQFMTSVATMLRRDNKLPGDTHLVQEDMAQVLELETHLANATTPPEERQDITELYHRMDLQQLQDRFSLKGFNWTLFIQTVLSSVKIELLPNEEVVVYGIPYLEKLENIIDLYSARTMQNYLVWRLVLDRISSLSQRFKDARVNYRKVLYGTTVEEVRWRECVGYVNSNMESAVGSLYVKEAFPGDSKNMVRELIKKVQAMFVETLDELGWMDEESKKKAQEKAMSIQEQVGYPTYILEESNRRLDQEYSSLNFSEDLYFENTLQNLKASAHRSLRKLRKKVDQNLWIIGAAVVNAFYSPNRNQIVFPAGILQPPFFSKEQPQALNFGGIGMVIGHEITHGFDDNGRNFDKNGNMLDWWSNSSAQHFREQSECMIHQYSNYSWDLAGSQHVNGFSTLGENIADNGGVRQAFKAYLKWMAEGGKDQLLPGLELTYKQLFFVNYAQVWCGSYRPEFAIQSIKTDVHSPLKYRVLGSLQNLPAFADAFHCPRGTPMHPKERCRIW