Sequence details NCBI ID: XM_004863172.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Prickle1
Gene Name prickle homolog 1 (Drosophila), transcript variant X2
Entrez Gene ID 101700621

Database interlinks

Part of NW_004624816.1 (Scaffold)

For more information consult the page for NW_004624816.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRICKLE1 ENSCPOG00000005579 (Guinea pig)

Gene Details

prickle homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005026, Guinea pig)

Protein Percentage 96.39%
CDS Percentage 92.94%
Ka/Ks Ratio 0.05961 (Ka = 0.0169, Ks = 0.2831)

PRICKLE1 ENSG00000139174 (Human)

Gene Details

prickle homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000401060, Human)

Protein Percentage 95.43%
CDS Percentage 89.89%
Ka/Ks Ratio 0.04776 (Ka = 0.0215, Ks = 0.4495)

Prickle1 ENSMUSG00000036158 (Mouse)

Gene Details

prickle homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104878, Mouse)

Protein Percentage 93.26%
CDS Percentage 85.8%
Ka/Ks Ratio 0.04442 (Ka = 0.0332, Ks = 0.7472)

Prickle1 ENSRNOG00000022772 (Rat)

Gene Details

prickle homolog 1 (Drosophila) (Prickle1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031476, Rat)

Protein Percentage 93.62%
CDS Percentage 86.16%
Ka/Ks Ratio 0.0452 (Ka = 0.0315, Ks = 0.6968)

Genome Location

Sequence Coding sequence

Length: 2499 bp    Location: 10165038..10185128   Strand: +
Raw sequence   
>XM_004863172.1
ATGCCTTTGGAGATGGAGCCCAAAATGAGCAAACTGGCCTTTGGATGTCAGAGAAGTTCCACATCTGATGATGATTCTGGCTGTGCACTGGAGGAGTACGCCTGGGTCCCCCCAGGCCTCAGACCCGAGCAGATCCAGCTCTACTTTGCATGCTTGCCAGAGGAAAAGGTTCCTTATGTTAACAGCCCTGGAGAGAAACATCGGATTAAACAGCTTTTATACCAGTTGCCACCACATGATAATGAGGTGCGGTACTGCCAATCTTTGAGTGAAGAGGAGAAAAAAGAACTGCAGGTGTTCAGTGCTCAGCGAAAGAAGGAAGCACTTGGAAGAGGAACGATTAAACTTTTGTCCAGGGCAGTGGTGCACGCCGTGTGTGAGCAGTGCGGACTGAAGATAAATGGAGGAGAGGTCTCGGTGTTTGCCTCCCGGGCAGGCCCTGGAGTGTGCTGGCATCCATCCTGCTTTGTCTGCTTCACGTGTAACGAGCTGCTGGTCGACCTCATCTATTTTTATCAGGATGGAAAAATTCACTGTGGCAGGCACCATGCAGAACTGCTCAAGCCACGGTGCTCAGCATGTGACGAGATAATTTTTGCTGATGAGTGCACAGAAGCGGAGGGTCGCCACTGGCACATGAAACACTTCTGTTGCCTGGAGTGTGAGACAGTCCTGGGAGGGCAGAGGTACATCATGAAGGACGGCCGTCCCTTCTGCTGTGGCTGCTTTGAGTCTCTCTATGCAGAGTACTGTGAAACCTGCGGGGAGCATATTGGTGTGGACCATGCACAGATGACCTATGATGGGCAGCACTGGCATGCCACAGAAGCATGCTTCTCCTGTGCCCAGTGTAAGGCCTCTTTGCTGGGATGCCCGTTCCTTCCCAAACAAGGTCAGATTTATTGCTCAAAAACCTGTAGCCTCGGAGAAGATATCCACGCCTCCGACTCTTCTGACTCTGCCTTCCAGTCAGCGAGGTCGAGAGACTCTAGAAGAAGCATCCGCATGGGCAAGAGCAGCAGGTCAGCAGATCAGTGCCGGCAGTCTCTTCTCCTGTCCCCTGCTCTGAACTATAAGTTTCCTGGCCTCTCAGGCAATGCCGATGACACCCTGTCTCGGAAGCTGGATGATCTGAGTCTCTCCAGACAAGGAGCCAGTTTTGCCAATGAGGAATTTTGGAAAGGCAGGGTAGAGCACGAAACTCCTGAAGAACCTGAAGAATGGGCTGAGCATGAAGATTATATGACACAGCTCCTCCTCAAGTTTGGTGATAAAAGCCTCTTTCAGCAGCAGCCCAGTGAGATGGATATTAGAGCCAGTGAGCACTGGATATCTGATAACATGGTTAAAAACACCCCAGAATTAAAGCAAAATCACCAGAGCCTTGCAAGTAAAAAATACCAATCTGATATGTACTGGGCTCAGTCACAAGATGGTCTTGGCGATTCCGCTTATGGCAGCCACCCAGGCCCCGCCAGCAGTAGGAGGCTCCAGGAGCTAGATCTGGACCATGGTGCCTCGGGATACAATCATGACCAGACACAGTGGTATGAAGACTCCCTGGAGTGTTTGTCAGACTTGAAACCAGAACAAAGTGTTCGAGATTCTATGGATTCTCTGGCTTTGTCTAATATCACAGGGGCTTCTGTAGATGCAGAAAGCAAGCCAAGACCATCATTATATTCTCTACAAAACTTTGAGGAGATAGAAGCGGAAGACTGTGAGAAAATGAGCAATATGGGAACTCTGAACTCATCCATGCTGCACAGGAGTGCAGAGTCCCTAAAAAGTCTAAGCTCAGAATTATGCCCAGAGAAAATCATGCCTGAAGAAAAACCAGTACATCTGCCAGTGCTCAGAAGATCCAAGTCTCAGTCCAGGCCCCAGCAGGTCAAGTTTTCAGATGATGTCATTGACAACGGAAGCTATGACAACATTGAAATCCGGCAGCCTCCAATGAGTGAAAGGACTCGGAGACGGGTCTACCATTTTGACGAGAGGGAGCCTAGGTCTCACCACCATCGCCGCAGGAGAAGTAGAAAGTCTCGCTCTGACAATGCCCTGAATCTTGTCACGGAACGAAAATACTCTTCCAAGGACAGACTGAGGCTTTATACCACCGATAACTATGAGAAATTTATACAGAATAAAAGTGCCCAGGAGATGCAAGCATACATTCAGAACAGTGATCTCTACAGCCAGTACGCCCATGCCACATCTGACTATGCACTGCAGAACCCCGGAATGAAAAGGTTTCTGGGGCTCTATGGTGACGATGATGACTCCTGGTGTTCCTCTTCCTCCTCCTCCTCTGACTCGGAAGAAGAAGGATATTTTCTTGGTCAACCAATCCCTCAGCCCAGGCCACAGAGATTTGCCTACTATACAGATGACCTTTCTAGTCCAACTTCTGCATTCCCCACCCCTCAGTTTGGTCAGAGGACAACTAAGTCCAAGAAGAAAAAAGGACACAAAGGCAAAAACTGTATTATTTCTTAA

Related Sequences

XP_004863229.1 Protein

Prickle1 PREDICTED: prickle-like protein 1-like isoform X2 [Heterocephalus glaber]

Length: 832 aa      View alignments
>XP_004863229.1
MPLEMEPKMSKLAFGCQRSSTSDDDSGCALEEYAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEEEKKELQVFSAQRKKEALGRGTIKLLSRAVVHAVCEQCGLKINGGEVSVFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSACDEIIFADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGCFESLYAEYCETCGEHIGVDHAQMTYDGQHWHATEACFSCAQCKASLLGCPFLPKQGQIYCSKTCSLGEDIHASDSSDSAFQSARSRDSRRSIRMGKSSRSADQCRQSLLLSPALNYKFPGLSGNADDTLSRKLDDLSLSRQGASFANEEFWKGRVEHETPEEPEEWAEHEDYMTQLLLKFGDKSLFQQQPSEMDIRASEHWISDNMVKNTPELKQNHQSLASKKYQSDMYWAQSQDGLGDSAYGSHPGPASSRRLQELDLDHGASGYNHDQTQWYEDSLECLSDLKPEQSVRDSMDSLALSNITGASVDAESKPRPSLYSLQNFEEIEAEDCEKMSNMGTLNSSMLHRSAESLKSLSSELCPEKIMPEEKPVHLPVLRRSKSQSRPQQVKFSDDVIDNGSYDNIEIRQPPMSERTRRRVYHFDEREPRSHHHRRRRSRKSRSDNALNLVTERKYSSKDRLRLYTTDNYEKFIQNKSAQEMQAYIQNSDLYSQYAHATSDYALQNPGMKRFLGLYGDDDDSWCSSSSSSSDSEEEGYFLGQPIPQPRPQRFAYYTDDLSSPTSAFPTPQFGQRTTKSKKKKGHKGKNCIIS