Sequence details NCBI ID: XM_004861941.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tshz1
Gene Name teashirt zinc finger homeobox 1, transcript variant X2
Entrez Gene ID 101706328

Database interlinks

Part of NW_004624806.1 (Scaffold)

For more information consult the page for NW_004624806.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TSHZ1 ENSCPOG00000009072 (Guinea pig)

Gene Details

teashirt zinc finger homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019077, Guinea pig)

Protein Percentage 94.87%
CDS Percentage 92.04%
Ka/Ks Ratio 0.08079 (Ka = 0.0263, Ks = 0.3253)

TSHZ1 ENSG00000179981 (Human)

Gene Details

teashirt zinc finger homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000323584, Human)

Protein Percentage 92.83%
CDS Percentage 87.44%
Ka/Ks Ratio 0.04181 (Ka = 0.0328, Ks = 0.7846)

Tshz1 ENSMUSG00000046982 (Mouse)

Gene Details

teashirt zinc finger family member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000089388, Mouse)

Protein Percentage 93.33%
CDS Percentage 87.01%
Ka/Ks Ratio 0.04665 (Ka = 0.0345, Ks = 0.7395)

Tshz1 ENSRNOG00000016246 (Rat)

Gene Details

Protein Tshz1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000055055, Rat)

Protein Percentage 93.91%
CDS Percentage 87.35%
Ka/Ks Ratio 0.04243 (Ka = 0.0319, Ks = 0.7506)

Genome Location

Sequence Coding sequence

Length: 3243 bp    Location: 5463156..5389466   Strand: -
Raw sequence   
>XM_004861941.1
ATGCCGAGGAGGAAGCAGCAGGCCCCCCGGCGCTCGGCAGCTTATGTTCCTGAGGAAGAATTGAAGGCAGCAGAAATAGATGAGGAGCATGTGGAGGATGGTGGGCTGTCTTTGGACGTTCAGGAGAGTGAGTTTGTATGCGATGAAGAGACGGAGATCAAAGAGGCACAGAGCTACCAGAACTCCCCTGTCAGCACTGCAACCAACCAGGATGCTGGCTATGGCTCACCCTTCAGTGAGAACAGTGATCAGCTAGCCCATTTCAAAAGCTCTTCCTCCAGAGATGAGAAAGAGGAGCCACAGTGTCCAGACAGCATCTCCTACCCTCAGGACAGCTTGGCACAAATCAAAGCCGTGTATGCGAACTTGTTCTCAGAGTCCTGCTGGTCTAGCTTAGCTCTGGATTTGAAGAAGTCCAGTTCGACCACCAGCAACAATGATGCTGGCCAGAAGGAGTGCTCCACCCCCACCCCCACCCCCTCCACCACTACTGCCGGTACCACCAGTACCACGGCAAGCACAGCCAGCACCAGCTGCAGCACCAGCACCAACCACAGCAGCACCACCAGTAACAGCAGCAGCTCTGGGTATGACTGGCACCAGGCTGCCTTGGCCAAGACGCTGCAGCAGACGTCATCCTATGGGCTGCTCCCTGAGCCCAGCCTGTTTAGCACCGTGCAGCTCTATCGGCAGAACAACAAACTGTATGGCTCTGTGTTCACCGGCGCTAGTAAATTTCGGTGCAAAGACTGTAGTGCTGCCTATGACACGCTGGTGGAACTGACAGTGCACATGAATGAGACGGGCCATTATCGTGATGACAACAGGGACAAGGACTCTGAGAAGACCAAGCGGTGGTCTAAGCCCAGGAAGCGCTCCCTGATGGAGATGGAGGGGAAAGAAGATGCACAGAAGGTGCTGAAGTGCATGTACTGTGGACACTCCTTTGAGTCCTTGCAAGACCTCAGCGTCCACATGATCAAAACAAAGCATTACCAGAAAGTGCCTCTGAAGGAGCCAGTGCCAGCCATCACTAAACTGGTCCCTTCTACCAAAAAGCGAGCACTTCAGGATCTGGCATCCCCTTGCTCTCCAGAGCCAGCAGGCATGGCCACAGAGGTTGCCCTAAGTGAGTCAGCCAAGGACCAGAAAACTGCAAACCCGTACGTCACACCGAATAACCGCTATGGCTACCAGAATGGTGCTAGTTACACGTGGCAGTTTGAGGCCCGCAAAGCGCAGATCCTCAAGTGCATGGAGTGCGGCAGCTCCCATGATACTCTGCAGCAGCTCACAGCCCACATGATGGTCACTGGCCACTTCTTGAAGGTGACAACCTCAGCTTCCAAGAAAGGAAAGCAACTGGTTCTGGACCCTGTGGTGGAAGAAAAGATCCAGTCCATACCCCTCCCCCCGACCACCCACACCCGGTTGCCAGCATCCAGCATCAAGAAACAGCCAGACTCTCCGGCTGGCTCCATGGCCTCTGAAGAAAAGAAAGAGCCCGAGAAGGAGAAGGCACCAGTGGTGGTGGTGGGTGATGTGGACAAGAAGATCAAGGAGGAGAGCGACGACACCGCTGAGAAGTTTGAGCCCACTGCTCTCTACCAGTACTTGCGTGAGGAGGACCTGGATGACAGCCCCAAGGGGGGCATGGACATTCTGAAGTCCCTGGAGAACACCGTGTCCACAGCCATCAGCAAAGCGCAGAATGGTGCGCCCTCTTGGGGGGGCTACCCCAGCATCCACGCAGCCTACCAGCTGCCAGGCACCGTGAAGCCGCTGCAGGCGGCCGTGCAGAGTGTACAGGTGCAGCCGTCCTATGCCAGCAGCATGAAGTCGCTGTCCACCACAGAGCACAATGCCCTCTTACACTCCCCGGGGAGCCTTACACCCCCACCGCACAAGAGCAACGTGTCTGCCATGGAGGAGCTGGTTGAGAAGGTCACAGGCAAGGTCATTGTCAAGAAGGAGGAGAGGTCTGCAGAGAAAGAGAAGAGCTCTCCCACCAAGGCTGCATCCCCTGTGGCAAAGGAGAATAAAGATTTTCCTAAGTCAGAGGAAATAGGTGGCAAGCAGCAGAAGAAGGGGCCGGAAGCTGAGACGGGGAAGGCCAAAAAGGAGAGCCCAGTGGATGCTCACACCCCAAACGGCACAGAGGCTCTCAAAGCCAGGGTCACCAATGGCTGTAACAACTTGGGGATCATCACGGACCACTCGCCAGAACCCTCCTTCATCAGCCCGCTGAGCGCTTTGCAGTCCATCATGAATACCCACCTGGGTAAGGTGTCGAAGCCTGTGAGCCCCTCTATGGACCCATTGGCAATGCTGTACAAAATCAGCAACAGCATGCTGGACAAGCCCGTTTACCCCACCACGCCAGTGAAGCAAGCTGATGCCATTGACCGCTACTACTACGAAAACAGTGACCAGCCCATCGATCTGACCAAGTCCAAGAACAAACCCCTGGTCTCTGGTGTGGCTGACTCTGTGTCGTCGCCTCTGCGGGAGAGTGCCCTCATGGATATCTCTGACATGGTGAAGAACCTCACGGGGCGCCTGACCCCCAAGTCCTCCACTCCCTCCACGGTGTCTGAGAAGTCCGATGCAGACGGAAGCAGCTTTGAGGAGGCACTGGATGAGCTGTCACCCGTCCACAAGAGGAAAGGGCGCCAGTCCAACTGGAACCCGCAGCACCTGCTCATCCTGCAGGCCCAGTTTGCCTCAAGTTTGCGGGAGACAGCAGAGGGCAAGTACATCATGTCGGACCTGGGTCCTCAGGAGCGTGTGCATATCTCCAAGTTCACAGGCCTCTCCATGACCACCATCAGCCACTGGCTGGCCAATGTGAAATACCAGCTTCGAAGGACAGGGGGAACAAAATTCCTCAAGAACCTCGACACAGGGCATCCTGTTTTCTTTTGCAACGATTGTGCCTCTCAATTCAGAACTGCTTCCACATACATCACCCATCTGGAGACGCACTTGGGCTTCAGCCTGAAGGACCTCTCCAAGCTGCCACTCAGTCAGATTCAAGAGCAGCAGAACGTCTCCAAAGTCCTTGTGAACAAGACTTTGGGCCCACTGGGGGCTGCCGAGGAAGACTTGGGCTCCACATTCCAGTGCAAGCTCTGCAACCGGACTTTTGCAAGCAAGCACGCAGTCAAACTGCACCTTAGTAAGACGCACGGCAAGTCGCCGGAGGACCACCTGATCTATGTGACTGAGTTGGAGAAACAATAG

Related Sequences

XP_004861998.1 Protein

Tshz1 PREDICTED: teashirt homolog 1 isoform X2 [Heterocephalus glaber]

Length: 1080 aa      View alignments
>XP_004861998.1
MPRRKQQAPRRSAAYVPEEELKAAEIDEEHVEDGGLSLDVQESEFVCDEETEIKEAQSYQNSPVSTATNQDAGYGSPFSENSDQLAHFKSSSSRDEKEEPQCPDSISYPQDSLAQIKAVYANLFSESCWSSLALDLKKSSSTTSNNDAGQKECSTPTPTPSTTTAGTTSTTASTASTSCSTSTNHSSTTSNSSSSGYDWHQAALAKTLQQTSSYGLLPEPSLFSTVQLYRQNNKLYGSVFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNRDKDSEKTKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVPAITKLVPSTKKRALQDLASPCSPEPAGMATEVALSESAKDQKTANPYVTPNNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTTSASKKGKQLVLDPVVEEKIQSIPLPPTTHTRLPASSIKKQPDSPAGSMASEEKKEPEKEKAPVVVVGDVDKKIKEESDDTAEKFEPTALYQYLREEDLDDSPKGGMDILKSLENTVSTAISKAQNGAPSWGGYPSIHAAYQLPGTVKPLQAAVQSVQVQPSYASSMKSLSTTEHNALLHSPGSLTPPPHKSNVSAMEELVEKVTGKVIVKKEERSAEKEKSSPTKAASPVAKENKDFPKSEEIGGKQQKKGPEAETGKAKKESPVDAHTPNGTEALKARVTNGCNNLGIITDHSPEPSFISPLSALQSIMNTHLGKVSKPVSPSMDPLAMLYKISNSMLDKPVYPTTPVKQADAIDRYYYENSDQPIDLTKSKNKPLVSGVADSVSSPLRESALMDISDMVKNLTGRLTPKSSTPSTVSEKSDADGSSFEEALDELSPVHKRKGRQSNWNPQHLLILQAQFASSLRETAEGKYIMSDLGPQERVHISKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDTGHPVFFCNDCASQFRTASTYITHLETHLGFSLKDLSKLPLSQIQEQQNVSKVLVNKTLGPLGAAEEDLGSTFQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLIYVTELEKQ