Sequence details NCBI ID: XM_004861236.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol R3hdm2
Gene Name R3H domain containing 2, transcript variant X1
Entrez Gene ID 101718968

Database interlinks

Part of NW_004624802.1 (Scaffold)

For more information consult the page for NW_004624802.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

R3HDM2 ENSCPOG00000009217 (Guinea pig)

Gene Details

R3H domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008276, Guinea pig)

Protein Percentage 95.94%
CDS Percentage 95.2%
Ka/Ks Ratio 0.1631 (Ka = 0.0207, Ks = 0.1266)

R3HDM2 ENSG00000179912 (Human)

Gene Details

R3H domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000317903, Human)

Protein Percentage 96.0%
CDS Percentage 94.53%
Ka/Ks Ratio 0.12428 (Ka = 0.0201, Ks = 0.1615)

R3hdm2 ENSMUSG00000025404 (Mouse)

Gene Details

R3H domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000126608, Mouse)

Protein Percentage 94.25%
CDS Percentage 91.02%
Ka/Ks Ratio 0.09256 (Ka = 0.0288, Ks = 0.3111)

R3hdm2 ENSRNOG00000007801 (Rat)

Gene Details

R3H domain containing 2 (R3hdm2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046983, Rat)

Protein Percentage 93.24%
CDS Percentage 90.99%
Ka/Ks Ratio 0.11915 (Ka = 0.0347, Ks = 0.2914)

Genome Location

Sequence Coding sequence

Length: 3132 bp    Location: 10554680..10694370   Strand: +
Raw sequence   
>XM_004861236.1
ATGTCTAACAGTAACACTACTCAAGAGACCCTTGAAATAATGAAAGAATCGGAAAAAAAACTGGTGGAAGAATCTGTAAACAAAAACAAGTTTATATCTAAGACTTCAAGTAAGGAAGAAGTGGAGAAAGAAGGTGAAGAGACCAGTGTGCGTCAGGAGACACAGAGGCGGGCATCCAACCATGGTCATGCCAGGAAAAGAGCCAAGTCTAATTCCAAGCTGAAATTAGTACGCAGTCTGGCAGTATGTGAGGAGTCCTCTACTCCATTTGCTGATGGGCCACTAGAAGCCCAGGATATAATTCAGTTGCACATCAGCTGCCCCTCTGACAAAGAGGAAGAAAAATCCATAAAAGATGTCTCTGAAAAAGAGGACAAGGACAAAAGTAAAGATAAGGCCCCAAGGAAGATGCTATCCAGAGACTCCAGCCAAGAATATACGGACTCCACTGGAATAGATCTACATGAATTTCTTGTAAATACACTGAAAAAGAACCCAAGGGACAGAATGATGCTGCTAAAATTAGAACAGGAGATTCTGGAATTTATTAATGACAACAATAACCAGTTCAAGAAGTTTCCTCAGATGACCTCATATCACCGGATGCTATTACACCGGGTAGCTGCCTATTTTGGGATGGACCACAATGTTGATCAAACTGGGAAAGCTGTCATCATCAACAAGACCAGCAACACAAGAATCCCTGAACAGAGATTCTCAGAACATATAAAGGATGAGAAGAATACAGAATTCCAACAGAGATTCATTCTCAAGAGAGATGATGCCAGTATGGACCGAGATGATAATCAGATCAGAGTTCCATTGCAGGATGGAAGGAGAAGCAAGTCAATAGAAGAGAGAGAGGAGGAATATCAAAGGGTCCGAGAGAGAATATTTGCCCGAGAGACTGGCCAGAACGGATATCTAAATGACATCAGACTCTCCAAAGAAGCCTTTTCTTCTAGCTCTCACAAGAGAAGGCAGATTTTTAGGGGACACCGAGAAGGGCTGAGCCGCACCTCAAGCAGCCGCCAGAGCAGCACAGACAGCGAACTCAAATCCTTGGAGCCCCGGCCTTGGAGCAGTACAGACTCGGATGGCTCTGTCCGGAGCATGCGACCCCCTGTCACCAAAGCCAGCAGCTTCAGCGGAATCTCTATCCTCACCCGAGGTGACAGCATTGGCAGCAGTAAAGGTGGCAGTGCAGGACGGCTCTCCAGGCCAGGTATGGCACTAGGTGCCCCAGAAGTGTGCAACCAGGTCACCTCACCCCAGTCTGTCCGGGGCCTTCTCCCTTGTACTGCCCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCCACTTCCTTCTCTCCCACCCACACCTCAGCAACAGCCACCCTTGAATAATCACATGATCTCACAGCCAGTCCCGGCTCTGCAGCCCTCTCCGCAGCCTGTTCAGTTCTCTCCAAGCTCCTGTCCCCAGGTCCTTCTGCCAATCTCTCCACCCCAGCAGTACAACATGGCAGATGATCTCAACAACCCCTTTGGACAGATGAGCCTTAGCCGCCAAGGTTCTACTGAAGCAGCTGACCCATCCTCAGCTCTGTTCCAGCCCCCACTTATCTCCCAGCACCCTCAACAGACTAGCTTCATCATGGCTTCCCCGGGACAGCCCCTCCCCAATTCCAACTATGCCACCTCTAGCCATCCACCACCTACTCAGCAAGTCCTGCCACCCCAGGGCTACATGCAGCCCCAACAGATCCAGGTTTCTTACTATCCTCCTGGACAGTATCCAAACTCCAACCAGCAATATCGACCTCTCTCTCACCCGGTGGCCTATAGCCCCCAGCGTGGTCAGCAGCTGCCTCAGCCATCCCAGCAGCCTGGTTTACAGCCCATGATGCCTACTCAGCAGCAGGCAGCTTACCAAGGCATGATTGGGGTCCAGCAGCCCCAGAACCAGGGCCTGCTCAGCAACCAGAGGAACAATATGGGTAGCCAGATGCAAGGCCTGGTGGTTCAGTACACTCCACTGCCTTCTTACCAAGTCCCAGTGGGGAGTGACTCACAAAATGTGGTCCAGCCGCCTTTCCAGCAACCCATGCTGGTCCCTGTGAGTCAGTCTGTGCAAGGAGGCCTCTCCGCGGCAGGTGTACCCGTGTACTACAGCATGATCCCACCCACTCAGCAGAACGGTACGAGCCCTTCTGTGGGGTTTCTGCAGCCCCCTGGCTCTGAGCAGTACCAGATGCCTCAGTCTCCTTCTCCCTGCAGTCCACCACAGATGCCACAGCAGTACTCAGGAGTGTCACCTTCCGGACCAGGTGTGGTGGTCATGCAGCTGAATGTCCCTAATGGACCCCAACCTCCCCAGAACACATCCATGGTCCAGTGGAATCATTGTAAATATTATAGCATGGACCAGCGGGGTCAGAAGCCTGGAGACCTGTACAGTCCTGACAATAACCCCCAGGCCAACACACAAATGAGCAGCAGTCCTGTCACATCTCCTACTCAGTCTCCAGCACCCTCTCCTGTCACCAGCCTCAGCAGTGTCTGCACAGGACTCAGTCCCCTGCCTGTTCTCACACAGTTCCCCCGGCCTGGGGGTTCAGCACAGGGTGATGGGCGCTACTCCCTCTTGGGCCAGCCATTACAGTACAATCTGTCCATCTGCCCTCCCTTGCTCCACGGCCAGTCGACATACACAGTGCATCAGGGACAGAGCGGATTAAAACATGGAAACCGGAGCAAGAGACAAACACTCAAGTCTGCCTCTACTGACCTGGGGACAGCAGATATTGTCCTGGGGCGGGTGCTGGAGGTGACAGATCTCCCTGAGGGCATCACTCGTACTGAGGCGGACAAACTCTTCACTCAGCTCGCCATGTCCGGCGCCAAGATCCAGTGGCTCAAAGATGCTCAGGGGCTGCCTGGCGGGGGTGGTGGGGACAACAGTGGGACTGCTGAGAATGGCCGCCACTCGGACCTCGCTGCCTTGTACACCATCGTGGCTGTGTTCCCCAGCCCTCTGGCTGCCCAAAATGCCTCCCTTCGCCTCAACAACTCTGTGAGTCGCTTCAAACTTCGAGTGGCCAAAAAGAACTATGACCTGAGGATCCTGGAGCGAGCCAGCTCCCAATAA

Related Sequences

XP_004861293.1 Protein

R3hdm2 PREDICTED: R3H domain-containing protein 2 isoform X1 [Heterocephalus glaber]

Length: 1043 aa      View alignments
>XP_004861293.1
MSNSNTTQETLEIMKESEKKLVEESVNKNKFISKTSSKEEVEKEGEETSVRQETQRRASNHGHARKRAKSNSKLKLVRSLAVCEESSTPFADGPLEAQDIIQLHISCPSDKEEEKSIKDVSEKEDKDKSKDKAPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFINDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNTEFQQRFILKRDDASMDRDDNQIRVPLQDGRRSKSIEEREEEYQRVRERIFARETGQNGYLNDIRLSKEAFSSSSHKRRQIFRGHREGLSRTSSSRQSSTDSELKSLEPRPWSSTDSDGSVRSMRPPVTKASSFSGISILTRGDSIGSSKGGSAGRLSRPGMALGAPEVCNQVTSPQSVRGLLPCTAQQQQQQQQQQQPLPSLPPTPQQQPPLNNHMISQPVPALQPSPQPVQFSPSSCPQVLLPISPPQQYNMADDLNNPFGQMSLSRQGSTEAADPSSALFQPPLISQHPQQTSFIMASPGQPLPNSNYATSSHPPPTQQVLPPQGYMQPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPTQQQAAYQGMIGVQQPQNQGLLSNQRNNMGSQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLSAAGVPVYYSMIPPTQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNTSMVQWNHCKYYSMDQRGQKPGDLYSPDNNPQANTQMSSSPVTSPTQSPAPSPVTSLSSVCTGLSPLPVLTQFPRPGGSAQGDGRYSLLGQPLQYNLSICPPLLHGQSTYTVHQGQSGLKHGNRSKRQTLKSASTDLGTADIVLGRVLEVTDLPEGITRTEADKLFTQLAMSGAKIQWLKDAQGLPGGGGGDNSGTAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSRFKLRVAKKNYDLRILERASSQ