Details from NCBI annotation

Gene Symbol Gli1
Gene Name GLI family zinc finger 1, transcript variant X3
Entrez Gene ID 101717488

Database interlinks

Part of NW_004624802.1 (Scaffold)

For more information consult the page for NW_004624802.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GLI1 ENSCPOG00000005414 (Guinea pig)

Gene Details

GLI family zinc finger 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004873, Guinea pig)

Protein Percentage 92.85%
CDS Percentage 92.64%
Ka/Ks Ratio 0.20045 (Ka = 0.0369, Ks = 0.1841)

GLI1 ENSG00000111087 (Human)

Gene Details

GLI family zinc finger 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000228682, Human)

Protein Percentage 90.14%
CDS Percentage 89.42%
Ka/Ks Ratio 0.18619 (Ka = 0.0537, Ks = 0.2886)

Gli1 ENSMUSG00000025407 (Mouse)

Gene Details

GLI-Kruppel family member GLI1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026474, Mouse)

Protein Percentage 85.96%
CDS Percentage 83.76%
Ka/Ks Ratio 0.13965 (Ka = 0.0792, Ks = 0.5675)

Gli1 ENSRNOG00000025120 (Rat)

Gene Details

GLI family zinc finger 1 (Gli1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009803, Rat)

Protein Percentage 86.05%
CDS Percentage 83.82%
Ka/Ks Ratio 0.14291 (Ka = 0.0796, Ks = 0.5568)

Genome Location

Sequence Coding sequence

Length: 3321 bp    Location: 10493246..10483279   Strand: -
>XM_004861233.1
ATGTTCAACTCCATGACGCCACCGCCTGTCAGTAGCTATGGTGAACCGTGCTGTCTCCGACCCCTCCCCAGCCAAGGGACCCCCAGCATGGGGACAGAAGGTCTATCTGGTCTGCCCTTCTGCCACCAAGCCAACCTCATGTCCGGCCCCCACAGTTATGGGCCAGCCAGAGAAACCAACAACTGCACTGAGGGGCCACTCTTTCCTCCTCCCCGGAGTACAGTCAAGCTGACCAAGAAGCGAGCACTTTCCATCTCACCTCTGTCAGATGCCAGCCTGGACCTGCAGACAGTCATCCGCACCTCGCCCAGCTCCCTTGTGGCCTTTATCAACTCACGCTGCACATCTCCAGGAGGCTCCTATGGCCATCTCTCCATTGGCACCATGAGCCCATCTCTAGGATTCCCACCCCAGATGAATCACCAGAAAGGGGCCTCACCTTCCTTTGGGGTCCAGCCCTGTGGTCCTCATGACTCCACCCGGGTTGGGATGATGTCACATCCTCAGTCCCGGGGACCACTCCCAACTTGCCAGCTGAAGTCAGAATTGGACTTGCTGGTTGGCAAGTGCCAGGAGGAATCCTTGGAAGATGATATGTCCAGCCCCAACTCCACAGGCACACAGGATCCCCTATTGGGGATGCTGGATGGGCGAGAGGACCTGGAGAGAGAGGAGAAGCCTGAGCCTGAGTCTGTGTATGAAACTGACTGCCGCTGGGATGGCTGCAGCCAAGAATTTGACTCCCAAGAGCAGCTAGTACATCACATCAACAGCGAGCACATCCATGGGGAGCGGAAGGAGTTTGTGTGCCACTGGGGGGGCTGCTCCAGGGAGCTGAGGCCCTTCAAAGCCCAGTACATGCTGGTGGTGCACATGCGTAGACACACGGGCGAGAAGCCACACAAGTGCACGTTTGAAGGGTGTCGGAAGTCATATTCACGCCTTGAAAATCTGAAGACACACCTGCGGTCACACACGGGTGAGAAGCCATACATGTGTGAGCACGAGGGCTGCAGTAAAGCCTTCAGCAATGCCAGCGACCGTGCCAAGCACCAGAATCGGACCCATTCCAATGAGAAGCCATATGTATGTAAGCTCCCTGGCTGTACCAAACGCTACACAGACCCCAGCTCACTCCGAAAACATGTCAAGACAGTGCATGGTCCTGACGCCCATGTGACCAAGCGGCATCGAGGGGACGGGCCTTTGCCCCGGGCACCATCCCTTTCTACAGTGGAGCCCAAGAGGGAGCGGGAAGGAGACCCCATCAGGGAAGAGAGCAGACTGACTGTGCCAGAGGGTGCCATGAAGCCACAGCCGAGTCCTGGGGCACAGTCTTCCTGCAGCAGTGACCACTCACCAGCTGGCAGCGCAGCCAATACAGACAGTGGCGTGGAAATGACAGGCAATGCTGGGGGCAGCACCGAGGACCTGTCCAGCTTAGATGAAGGCCCTTGCATTGCTGGCACTGGACTCTCCACTCTCCGCCGCCTTGAGAACCTCAGACTGGACCAATTGCATCAACTCCGGCCAGTAGGGCCCCGGGGTCTCAAACTGCCCAGCCTGACCCATACTGGCACCACTGTGTCCCGCCGTCTGGGCCCCCCAGTCTCTCTTGACCGTCGCAGCAGCAGCTCGAGCAGCATCAGCTCTGCCTATACTGTCAGCCGCCGCTCCTCCCTCGCCTCTCCTTTCCCTCCTGGGTCCCCACCAGAGAATGGGGCCTCCTCCCTGCCTAGCCTCATGCCTCCCCAGCACTACCTGCTCCGGGCAAGATATGCTTCAGCCAGAGCAGGTGGTACCCCACCCACCACAGCACCCAGCCTGGATTGGATGGGGAGTCTTCCTGCACCTCCTTGGAGAACCCGAGCTGAGTATCCAGGATACAACCCCAATGCAGGAGTCATGCGGAGGGCCAGTGATCCAGCCCGGGCTGCTGACCGCCCTGCTCCTACCAGAGTCCAGAGGTTCAAGAGTCTGGGCTGTGTCCACACATCCCCTTCTGTAACAGGGGGGGGACGGAATTTTGATCCCCATCTCCCAAACTCTGTCTATTCACCACAGCCCCCCAGCATCACTGAGAATGTTGCCATGGATACTAGAGGGCTACGGGAGGAGCCAGAGGTTGGGGCTTCTGTTATGGGCAGCACCCTGAACCCCTATATGGACTTCTCATCTGCTGATACTCTGGGATATGGGGGAACTGAAGGATCAGCAGCTGAGCCTTATGGAGCTAGGGGTCCAGGGTCTCTGCCTCTTGGGCCTGGCCCACCCAACAACTACAGCCCTAGCCCCTGTCCCCAACAGGTCTCCTATCCTGGCCCTACCCCAGAAACATGGGGCGAGTTCCCTTCCCACTCTGGGCTGTACCCAGGCTCCAAGGTCACAGGTGGAGCCTATAGCCAGTGTCCTCGACTTGAACATTATGGACAAGTGCAGGTCAAGCCCGAGCAAGGGTGCCCAGTGGGGTCTGACTCAACAGGACTGGCACCCTGCCTCAATGCACACCCTAGTGAGGAACCCCCATGCCCACAGCCTCCATTCTCCCACTATCCCCAGCCTCCTCCCGCTCAATATCCCCAGTCAGGTTCCTACCCTCAGCCACCCCCTGATTATCTTCCTTCAGAACCCAGGACCAGCCTGGATTTTGATTCCCCTGCTCATTCTACAGGACAGTTCAAGGCCCAACTAGTGTGTAATTATGTTCAGTCTCAGCAGGAGCTGCTCTGGGAGGGTTCGGGCAGGAGAGAGGCCCCAGTCCAGGAACTTCCCTACCAGAATCCCAAGTTTCTGGGGAGCTCCCAGGTTAGCCCAACCCCTGCCAAAGCCCCAGTGCCCACATATGGACCTGGATTTGCACCCAGCTTGCCCAATAACAAGTCAGGGTCTTATCCTACCCCTTCACCATGCCATGAAAGTTTTGCAGTGGGAGCAAACAGGGCTTCCCATAGGGCAGTGGCACCACCCCGGCTTCTGCCTCCATTACCTACTTGCTATGGGCCCCTCAAGGCAGGAGGTGCCAACCCCAGCTGTGGCCATCCCGAGGTGGGAAGGCTGGGAGGGGGTCCTGCCTTGTACCCTCCTCCAGAAGGGCAGGTGTGTAATCCTCTGGACTCTCTTGATCTTGACAACACTCAGCTGGACTTTGTGGCAATTCTGGATGAGGCACAGGGGCTGAGTCCTCCCCCTTCCCATGATCAGGGGGATACCTCTGAACATACCCCACCTCCCTCTGGGCCCCTCAACATGGCTGTGGGTAACATGAGTGTCTTACTGGGATCCCTACCTGGGGAGACACAATTCCTCAACTCTAGTGCCTGA

Related Sequences

XP_004861290.1 Protein

Gli1 PREDICTED: zinc finger protein GLI1 isoform X3 [Heterocephalus glaber]

Length: 1106 aa      View alignments
>XP_004861290.1
MFNSMTPPPVSSYGEPCCLRPLPSQGTPSMGTEGLSGLPFCHQANLMSGPHSYGPARETNNCTEGPLFPPPRSTVKLTKKRALSISPLSDASLDLQTVIRTSPSSLVAFINSRCTSPGGSYGHLSIGTMSPSLGFPPQMNHQKGASPSFGVQPCGPHDSTRVGMMSHPQSRGPLPTCQLKSELDLLVGKCQEESLEDDMSSPNSTGTQDPLLGMLDGREDLEREEKPEPESVYETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAPSLSTVEPKREREGDPIREESRLTVPEGAMKPQPSPGAQSSCSSDHSPAGSAANTDSGVEMTGNAGGSTEDLSSLDEGPCIAGTGLSTLRRLENLRLDQLHQLRPVGPRGLKLPSLTHTGTTVSRRLGPPVSLDRRSSSSSSISSAYTVSRRSSLASPFPPGSPPENGASSLPSLMPPQHYLLRARYASARAGGTPPTTAPSLDWMGSLPAPPWRTRAEYPGYNPNAGVMRRASDPARAADRPAPTRVQRFKSLGCVHTSPSVTGGGRNFDPHLPNSVYSPQPPSITENVAMDTRGLREEPEVGASVMGSTLNPYMDFSSADTLGYGGTEGSAAEPYGARGPGSLPLGPGPPNNYSPSPCPQQVSYPGPTPETWGEFPSHSGLYPGSKVTGGAYSQCPRLEHYGQVQVKPEQGCPVGSDSTGLAPCLNAHPSEEPPCPQPPFSHYPQPPPAQYPQSGSYPQPPPDYLPSEPRTSLDFDSPAHSTGQFKAQLVCNYVQSQQELLWEGSGRREAPVQELPYQNPKFLGSSQVSPTPAKAPVPTYGPGFAPSLPNNKSGSYPTPSPCHESFAVGANRASHRAVAPPRLLPPLPTCYGPLKAGGANPSCGHPEVGRLGGGPALYPPPEGQVCNPLDSLDLDNTQLDFVAILDEAQGLSPPPSHDQGDTSEHTPPPSGPLNMAVGNMSVLLGSLPGETQFLNSSA