Sequence details NCBI ID: XM_004861096.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Helb
Gene Name helicase (DNA) B, transcript variant X1
Entrez Gene ID 101704051

Database interlinks

Part of NW_004624802.1 (Scaffold)

For more information consult the page for NW_004624802.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HELB ENSCPOG00000013679 (Guinea pig)

Gene Details

helicase (DNA) B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012318, Guinea pig)

Protein Percentage 82.56%
CDS Percentage 87.49%
Ka/Ks Ratio 0.32823 (Ka = 0.0966, Ks = 0.2943)

HELB ENSG00000127311 (Human)

Gene Details

helicase (DNA) B

External Links

Gene Match (Ensembl Protein ID: ENSP00000247815, Human)

Protein Percentage 73.2%
CDS Percentage 81.94%
Ka/Ks Ratio 0.4121 (Ka = 0.1645, Ks = 0.3992)

Helb ENSMUSG00000020228 (Mouse)

Gene Details

helicase (DNA) B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020449, Mouse)

Protein Percentage 65.17%
CDS Percentage 71.91%
Ka/Ks Ratio 0.28895 (Ka = 0.2502, Ks = 0.8659)

Helb ENSRNOG00000004189 (Rat)

Gene Details

helicase (DNA) B

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029882, Rat)

Protein Percentage 66.54%
CDS Percentage 72.08%
Ka/Ks Ratio 0.28253 (Ka = 0.2474, Ks = 0.8757)

Genome Location

Sequence Coding sequence

Length: 3234 bp    Location: 1993491..1960794   Strand: -
Raw sequence   
>XM_004861096.1
ATGGCCGGGGTGAGTAAGAACCTGCGGGAACTGGTGGGACCCCTGCTCCCGCCCAAGGACCAGGTGGAGGAGGAAGATGAGTTTGCGATGGGAGATGGGGAGGAGGAAGCGGAAGACTCTGTGTTTGTGGACGCCGAGGAGCTCTGCAGCGGGGGCGTCAAGGCTGGCGGCCTCCCCTGGCGTCAGCATGTTGTCATTCATGATGAAAACACTCAAGAGCAGTGTAAAGTGGTTGGACGTTTTCCGATAATGGGTCCTTGGTGGCAAGTGAAGGTACAGGTAAAGCCTGTAGGATCAAGGAAATATATAGTTCAAGGGTTTCCATCATACTTTTTACGATCCAACATGTCACCACCAGATCAAAAAAATATCTGTTCTCTGTTTCTTAAAGAATGTGGGATCCCCTGTGAGGTGGTAAGTCAGTTTTTAGCATGGGTAAAGAAAGCATCAAGCTATGAAGACCTAAGCTTTGAAAATCTTAAGGAAACATTAAGAACTTTCTACAAGGAAATTAGAAAGAAAGATAAAAGACAGTCTGCAAAAAATGAACAGCCGGAGTTATTACCAGATAATGAGATAAGTCTTCTGGAAAACCAAATTCCATTTGTACATGTCATGACAGCTTTGCAGTTTCCAAAAATCATGGAATTTCTTCCAGTTCTTTTGCCTCGATACTTTAAACGGCTTATCAGCACAGATTCTAAAGTGGTATTGGAAGCAATCGAAGAGATTTTAGGTACACAACCATGGAAGCTGGGATTTAGTAGAATAACCTACAGAGACTTGAAGCTTTTGCGATGTGAGGCAAGTTGGACAGCATTCTCTCAGTGCCCGTCTCTTCTCCAGTTGATGACTGATTTGGAGAAAAATGCATTGGATCTATATTCTAAATTGAAGCAGATATGTAGAGAACATGGGCACACATATGTTGAACAAGCGTCCTTAACCTCACAGTTGTATTACGATGTTTGGCAGTCTCTGGAGTTTCTGAAGGATATTGGTGTGGTGACATTTAGGAAGGACTGTGTCTTTCTCCATGAACTGTACCAGGCAGAAAGAAGCATTGCCTCTTTAATATGTGACCTCATGAAGAGACCTCCATGGCATTTACATGTCGATGTCAGGAAGGTGCTGGCATCTATTCATACCACAAAACTCAAGGATTCAAGAAGTGAGGAATCACTGAAGGAAAGTAAACCCGATGAAACAAGATTAGAAAATTCTATAGACATTTTGGAACTACAGGACAGTGATGATCATATTTGGGATGAAGAAAATGATATTAATGCAGAAATGAATGAAGTACAACTGGATCATGATCAGGTTACTGCTTTGGAAATGATTTGCTCCAATGCTGTGACAGTCATTAGTGGGAAGGGTGGCTGTGGGAAGACCACAATTGTTAGCCGTCTTTTTAAGTACATAGAGCAGTTTGAAGAAAGTGAAGTAAAGAAAGCTTGTGAAGATTTTGAACAAGATCAGGATGTCCCAGAAGAGTGGACTACCTTTACTGAACAAGGTCAAAGTGGATCAGACAAGCCTATAGAAGTTTTGCTCACAGCTCCTACAGGGAAAGCAGCTGGCTTACTGAGAGAGAAAACCAGTCTTCCTGCTTATACACTGTGTCAGGTCAATTATAGCTTTTATTTTTGGACCAAAAACCTGAAGAAGAAGAATTTGGCATGGAAATTTTCTTCAGTTAGAGTTCTGGTTGTGGATGAAGGGAGTTTGGTATCTGTAGGAATCTTCAAATCAGTTTTAAAATTATTGTGTGAGCATTCCAGACTTTCTAAGCTTATTATCCTTGGTGATATTAGACAGCTACCCAGTATTGAACCTGGAAACTTGTTGAAAGATCTTTTTGATACTCTTAAGTCAAGAAAGTGTGCTATTGAGCTAAAGACAAATCATAGAGCAGAATCTCAGCTAATTGTTGACAATGCTACACGAATCTCAGAACGCCAGTTTCCAAAATTTGATGCGGAACTAAATATCTCTGAGAATTCTGCATTCCCCATCTCAATTCAAGATAAGACATTCATTTTTGTCAGACTCCTAGAAGAATATGCCAGTTCCCAGTCATCTAAAAGTGATCATAAGTCCTATTTATATTCTGCGGTTAAAGCTTTATTGCAAGAAAGTGATTTTAAAAGTGCAGAAACATCACAATTCATTGCATTTAGAAGGCAAGACTGTGACTTAATCAATGACTGCTGTTGTAAGCACTACACTGGCCATCTCACCAGAGACCATCAGAAGAGACTCATATTTGGAATTGATGATAAAATTTGTTGTACCAAGAATGCATACCTCTCAGAGTTACTTCCTGAAAATCCTTCTGAAACTGAGCCAAATAGTGATTTACAGGCCAGTGGTGAAGGCTTTTGTGGTACTCCTCATGATTTTTCTAAAAATAAGCATGAACTTGAAAGTGGTATTCGGCTATGTAATGGAGAAATATTTTTCATAACAAATGATGTAACTGATGTGACTTTTGGAAAGAGAAGATCTGTGACTATTAGTAATATGGCTGGCTTGGAAGTAACTGTGGATTTTAGAAAACTAATGAAATACTGTCACATAAAACATGCCTGGGCCAGAACTATTCATACTTTTCAGGGGTCTGAGGAGCACACTGTTGCCTACGTGGTGGGAAAGGCAGGCCGCCAGCACTGGCAGCACGTCTACACTGCGGTCACCAGGGGCCGCTGCAGAGTGTACGTCATTGCGGAAGAGTCTCAGCTCCAGAGTGCAATCAGAAGACCAGATATTCTCAGGCAAACTCGTCTAAAACACTTCTTGCAAAATGAGCTCTCTGTTAGATGTGCTTCTCTGGCAGATCGTCCATCTCAGCCTGAGAGCTCTGGAGAGAGTGGAGGACCCAGCCTGCCAGCAGCACCCCTCCCTAAAGACACAACCAACACTGTCACAGGTGGTGTTGCCAAGAGCCAGTCCTCTTTGGCTGATGACGGGATGGCTACCTTTGTGAGAGGGTGGAGGTTTTCTTCATTTGATGAAATGTATACAGATGAGGATTTGTCACCACCTCCAGGGTCCAAAAGAACCTCTGGTGTGCACACCTGTGACAGTCCAAGCAAAGTTTCCAAGGTGGAAGAACCATCTCCACAAGTGTCTTCTAAACTTCAGAATTTGAGACTAAATAAATTAATTCCCAAGCAACTTTTCAAGCCCATAGACAATCAAGAAAACTTCACTTCAGATTGCTCAAAATAA

Related Sequences

XP_004861153.1 Protein

Helb PREDICTED: DNA helicase B isoform X1 [Heterocephalus glaber]

Length: 1077 aa      View alignments
>XP_004861153.1
MAGVSKNLRELVGPLLPPKDQVEEEDEFAMGDGEEEAEDSVFVDAEELCSGGVKAGGLPWRQHVVIHDENTQEQCKVVGRFPIMGPWWQVKVQVKPVGSRKYIVQGFPSYFLRSNMSPPDQKNICSLFLKECGIPCEVVSQFLAWVKKASSYEDLSFENLKETLRTFYKEIRKKDKRQSAKNEQPELLPDNEISLLENQIPFVHVMTALQFPKIMEFLPVLLPRYFKRLISTDSKVVLEAIEEILGTQPWKLGFSRITYRDLKLLRCEASWTAFSQCPSLLQLMTDLEKNALDLYSKLKQICREHGHTYVEQASLTSQLYYDVWQSLEFLKDIGVVTFRKDCVFLHELYQAERSIASLICDLMKRPPWHLHVDVRKVLASIHTTKLKDSRSEESLKESKPDETRLENSIDILELQDSDDHIWDEENDINAEMNEVQLDHDQVTALEMICSNAVTVISGKGGCGKTTIVSRLFKYIEQFEESEVKKACEDFEQDQDVPEEWTTFTEQGQSGSDKPIEVLLTAPTGKAAGLLREKTSLPAYTLCQVNYSFYFWTKNLKKKNLAWKFSSVRVLVVDEGSLVSVGIFKSVLKLLCEHSRLSKLIILGDIRQLPSIEPGNLLKDLFDTLKSRKCAIELKTNHRAESQLIVDNATRISERQFPKFDAELNISENSAFPISIQDKTFIFVRLLEEYASSQSSKSDHKSYLYSAVKALLQESDFKSAETSQFIAFRRQDCDLINDCCCKHYTGHLTRDHQKRLIFGIDDKICCTKNAYLSELLPENPSETEPNSDLQASGEGFCGTPHDFSKNKHELESGIRLCNGEIFFITNDVTDVTFGKRRSVTISNMAGLEVTVDFRKLMKYCHIKHAWARTIHTFQGSEEHTVAYVVGKAGRQHWQHVYTAVTRGRCRVYVIAEESQLQSAIRRPDILRQTRLKHFLQNELSVRCASLADRPSQPESSGESGGPSLPAAPLPKDTTNTVTGGVAKSQSSLADDGMATFVRGWRFSSFDEMYTDEDLSPPPGSKRTSGVHTCDSPSKVSKVEEPSPQVSSKLQNLRLNKLIPKQLFKPIDNQENFTSDCSK