Sequence details NCBI ID: XM_004859657.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Spop
Gene Name speckle-type POZ protein, transcript variant X2
Entrez Gene ID 101725604

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPOP ENSCPOG00000010810 (Guinea pig)

Gene Details

speckle-type POZ protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009706, Guinea pig)

Protein Percentage 98.13%
CDS Percentage 95.01%
Ka/Ks Ratio 0.04958 (Ka = 0.0088, Ks = 0.1785)

Genome Location

Sequence Coding sequence

Length: 1125 bp    Location: 5730634..5698904   Strand: -
Raw sequence   
>XM_004859657.1
ATGTCAAGGGTTCCAAGTCCTCCACCCCCGGCAGAAATGTCGAGTGGCCCCGTAGCTGAGAGCTGGTGCTACACACAGATCAAAGTAGTGAAATTCTCCTACATGTGGACCATCAATAACTTTAGCTTTTGCCGAGAGGAAATGGGTGAAGTCATTAAAAGTTCAACCTTTTCATCAGGAGCCAATGATAAACTGAAATGGTGTTTACGAGTAAACCCAAAAGGGCTCGATGAAGAAAGCAAAGATTACCTGTCCCTTTACCTGTTACTGGTCAGCTGTCCAAAGAGTGAAGTTCGGGCAAAATTCAAATTCTCCATTCTGAATGCCAAGGGAGAGGAAACCAAAGCTATGGAGAGTCAACGAGCTTATAGATTTGTGCAAGGCAAAGACTGGGGATTCAAAAAATTCATCCGTAGAGATTTTCTTCTGGATGAGGCCAACGGGCTTCTCCCTGATGACAAACTTACCCTTTTCTGCGAGGTGAGTGTGGTGCAAGATTCTGTCAATATTTCTGGTCAGAATACCATGAATATGGTGAAGGTTCCCGAGTGCCGATTGGCAGATGAGCTAGGAGGGCTGTGGGAGAATTCCCGGTTCACAGACTGCTGCTTGTGCGTTGCTGGCCAGGAATTCCAGGCTCACAAAGCAATCTTAGCAGCGCGTTCTCCAGTTTTTAGTGCCATGTTTGAACATGAAATGGAGGAGAGCAAAAAGAATCGAGTTGAAATCAATGATGTGGAGCCTGAAGTTTTTAAGGAAATGATGTGCTTCATTTACACGGGGAAGGCGCCAAACCTCGACAAAATGGCGGATGATTTGCTGGCAGCTGCTGACAAGTACGCCCTGGAGCGCCTGAAGGTCATGTGCGAGGACGCCCTCTGCAGCAACCTCTCTGTGGAGAATGCCTCGGAGATCCTCATCCTGGCTGACCTCCACAGCGCAGACCAGCTGAAAACTCAGGCAGTGGATTTCATCAACTATCATGCTTCGGATGTCCTGGAGACCTCCGGGTGGAAGTCCATGGTGGTGTCACACCCTCACTTGGTGGCCGAAGCCTATCACTTTCTGGCTTCAGTGAAGTGTCCTTTCCTGGGGCCCCCATGCAAGCGCCTGAAGCAGTCCTAA

Related Sequences

XP_004859714.1 Protein

Spop PREDICTED: speckle-type POZ protein isoform X2 [Heterocephalus glaber]

Length: 374 aa      View alignments
>XP_004859714.1
MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENASEILILADLHSADQLKTQAVDFINYHASDVLETSGWKSMVVSHPHLVAEAYHFLASVKCPFLGPPCKRLKQS