Sequence details NCBI ID: XM_004858650.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sdhc
Gene Name succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa, transcript variant X1
Entrez Gene ID 101698043

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SDHC ENSCPOG00000012704 (Guinea pig)

Gene Details

succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011429, Guinea pig)

Protein Percentage 89.22%
CDS Percentage 91.82%
Ka/Ks Ratio 0.4351 (Ka = 0.0654, Ks = 0.1504)

SDHC ENSG00000143252 (Human)

Gene Details

succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000356953, Human)

Protein Percentage 88.76%
CDS Percentage 88.76%
Ka/Ks Ratio 0.2117 (Ka = 0.0642, Ks = 0.3034)

Sdhc ENSMUSG00000058076 (Mouse)

Gene Details

succinate dehydrogenase complex, subunit C, integral membrane protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000106968, Mouse)

Protein Percentage 78.11%
CDS Percentage 81.85%
Ka/Ks Ratio 0.29565 (Ka = 0.1374, Ks = 0.4646)

Sdhc ENSRNOG00000003163 (Rat)

Gene Details

succinate dehydrogenase complex, subunit C, integral membrane protein (Sdhc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004228, Rat)

Protein Percentage 80.47%
CDS Percentage 82.45%
Ka/Ks Ratio 0.25794 (Ka = 0.123, Ks = 0.4769)

Genome Location

Sequence Coding sequence

Length: 510 bp    Location: 97989..55910   Strand: -
Raw sequence   
>XM_004858650.1
ATGGCGGCGCTCTTGTTGAGACATGCTGGGCGCCATTGCCTCCGATCCCACCTTAGTCCTCAGCTCTGTATCAGAAATGCTGTGCCTTTGGGAACCACAGCCAAAGAAGAGATGGAGCGGTTCTGGAATAAGAACACAGGTTCAAACCGTCCTGTATCTCCTCATATCACTGTCTACAGTTGGTCTCTTCCCATGATGATGTCCATTTGCCATCGTGGCACTGGTGTGGCCTTGAGTGGAGGGGTCTCTCTGTTTGGTGTGTCAGCCCTGTTGCTCCCTGGGAACTTGGAGTCTTACTTGGAATTTGTGAAGTCTTTGTGTCTGGGACCAGCACTGATCTACACAGCTAAGTTTGTGCTTGTCTTCCCACTCATGTATCACACCTGGAATGGGATCCGTCACTTGATGTGGGACCTAGGAAAAGGCCTGAAGACTGCCCAGCTCTACCAGTCGGGGGTGGCTATCTTGGTTCTTACTGTGTTGTCCTCTGCAGGACTGGCAGCCATGTGA

Related Sequences

XP_004858707.1 Protein

Sdhc PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X1 [Heterocephalus glaber]

Length: 169 aa      View alignments
>XP_004858707.1
MAALLLRHAGRHCLRSHLSPQLCIRNAVPLGTTAKEEMERFWNKNTGSNRPVSPHITVYSWSLPMMMSICHRGTGVALSGGVSLFGVSALLLPGNLESYLEFVKSLCLGPALIYTAKFVLVFPLMYHTWNGIRHLMWDLGKGLKTAQLYQSGVAILVLTVLSSAGLAAM