Sequence details NCBI ID: XM_004858496.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Grtp1
Gene Name growth hormone regulated TBC protein 1, transcript variant X4
Entrez Gene ID 101700344

Database interlinks

Part of NW_004624793.1 (Scaffold)

For more information consult the page for NW_004624793.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GRTP1 ENSCPOG00000013842 (Guinea pig)

Gene Details

growth hormone regulated TBC protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012473, Guinea pig)

Protein Percentage 70.56%
CDS Percentage 75.94%
Ka/Ks Ratio 0.26451 (Ka = 0.2094, Ks = 0.7916)

GRTP1 ENSG00000139835 (Human)

Gene Details

growth hormone regulated TBC protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000364580, Human)

Protein Percentage 63.86%
CDS Percentage 70.15%
Ka/Ks Ratio 0.16926 (Ka = 0.255, Ks = 1.5063)

Grtp1 ENSMUSG00000038515 (Mouse)

Gene Details

GH regulated TBC protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130324, Mouse)

Protein Percentage 62.35%
CDS Percentage 68.1%
Ka/Ks Ratio 0.15539 (Ka = 0.2681, Ks = 1.7254)

Genome Location

Sequence Coding sequence

Length: 1029 bp    Location: 640077..652306   Strand: +
Raw sequence   
>XM_004858496.1
ATGCGTCGGGCTGAGCGCTCGCCGGCACCGCCGGCCTGCGGGCTCAGGGTCGACCCGTATGGGTTCGAGCGGCCCGAAGACTTCGACTACGCCGCCTACGACGAGTTCCTCTCCGCCTACCTGGCGGTGCTCACCAGGAGAGCCCTGAAGTGGTCCCGGCTGCTGCAGGGGGACAGCGGCCTGCGCAGGACCGCGACAGGATTTTCACCTCGTGGTGTCTCCAGTAGCACAGTCATCTGCAGACCGTGGTGTTCGATGTCTTCACCATGCTGGTCCTTGCGCACGGGCCCAGTGAATGGGTCCCACGGGAGCCCGGAGCAGACAGCGTGCTTCTCCCGCAAAGCCGGCCTGCTTGATCTGCTTTTCCGTTTCACTTTGTCTGCCATGGCGGGGCCTGTTCATCGGGAGGCATTTGGAATATGGAAAGCCAACATAACATTCACTTGCACGCTTCTCTCAGTGAAGCGCTACATCCGGAAAGGGGTCCCGCTGGAGCACCGGGCCCGAGTGTGGCTGGCTGTGAGCGGAGCGCAGGCCCAGATGGAGCAGAACCCCGGCTACTACCAGCGGCTACTGCGGGGAGAGCGAAACCCTGAGCTGGAGGAAGCCATCAGGACAGACCTGAGCCGCACCTTCCCGGACAACGTGAGGTTCCGAAAGATGGCACAGCCCTGCTTGCAGAAGGCTCTGTCCGACGTGCTGCTGGCCTACGGGCTGCACAACCCAGGTGTGGGCTACTGCCAGGGAATGAATTTCATAGCGGGATATCTCATTCTCATCACAAAGAGTGAAGAAGAGTCTTTCTGGCTCCTAGACGCTCTCATTGGACGGATCCTGCCCGGGAAGGAAGCACAGCCAGACCCCAGGAGAAGGCACAGCATGAGTGTGAGGGCTGGAGTGGAAAGACGTCCTGACAGCAGTTCCAGAGGGGGCGACGCAGGCAATGCTCAGTGCGCGGAAAGCTTAAAAGCCAGCAAGTTAAAGGACAGCGTAAACAGAGCAAGACAAGCACGGAGAGGGTACCTGTGA

Related Sequences

XP_004858553.1 Protein

Grtp1 PREDICTED: growth hormone-regulated TBC protein 1 isoform X4 [Heterocephalus glaber]

Length: 342 aa      
>XP_004858553.1
MRRAERSPAPPACGLRVDPYGFERPEDFDYAAYDEFLSAYLAVLTRRALKWSRLLQGDSGLRRTATGFSPRGVSSSTVICRPWCSMSSPCWSLRTGPVNGSHGSPEQTACFSRKAGLLDLLFRFTLSAMAGPVHREAFGIWKANITFTCTLLSVKRYIRKGVPLEHRARVWLAVSGAQAQMEQNPGYYQRLLRGERNPELEEAIRTDLSRTFPDNVRFRKMAQPCLQKALSDVLLAYGLHNPGVGYCQGMNFIAGYLILITKSEEESFWLLDALIGRILPGKEAQPDPRRRHSMSVRAGVERRPDSSSRGGDAGNAQCAESLKASKLKDSVNRARQARRGYL