Details from NCBI annotation

Gene Symbol Rpa1
Gene Name replication protein A1, 70kDa
Entrez Gene ID 101698906

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624786.1 (SequenceType object (1))

For more information consult the page for NW_004624786.1 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPA1ENSCPOG00000000035 (Guinea pig)

Gene Details

replication protein A1, 70kDa

External Links

Gene Match(Ensembl Protein ID:ENSCPOP00000000030, Guinea pig)

Protein Percentage 93.51%
CDS Percentage 92.64%
Ka/Ks Ratio 0.15699 (Ka = 0.034, Ks = 0.2167)

RPA1ENSG00000132383 (Human)

Gene Details

replication protein A1, 70kDa

External Links

Gene Match(Ensembl Protein ID:ENSP00000254719, Human)

Protein Percentage 90.57%
CDS Percentage 88.13%
Ka/Ks Ratio 0.11917 (Ka = 0.0501, Ks = 0.4206)

Rpa1ENSMUSG00000000751 (Mouse)

Gene Details

replication protein A1

External Links

Gene Match(Ensembl Protein ID:ENSMUSP00000000767, Mouse)

Protein Percentage 86.81%
CDS Percentage 85.29%
Ka/Ks Ratio 0.12973 (Ka = 0.0709, Ks = 0.5467)

Rpa1ENSRNOG00000003123 (Rat)

Gene Details

replication protein A1 (Rpa1), mRNA

External Links

Gene Match(Ensembl Protein ID:ENSRNOP00000004229, Rat)

Protein Percentage 88.69%
CDS Percentage 86.36%
Ka/Ks Ratio 0.10859 (Ka = 0.0577, Ks = 0.5309)

Genome Location

Sequence SequenceType object (2)

Length: 1851 bp    Location: 4547904..4605015   Strand: +
>XM_004857149.1
ATGGCTGGCCAGCTGAGCGAGGGAGCCATTGCGGCCATAATGCAACAGGGGGATACATCGATAAAACCTATTCTCCAAGTCATTAGCATCCGCCCCATTACTACAGGGAATAGTCCACCCCGATATCGACTGCTTATGAGTGATGGAATAAACACTCTATCCTCTTTCATGTTAGCAACACAGATGAACTCTCTGGTTGAGGAAGAACGATTGGCTAGCAACTGTATTTGCCAGATTCAACGATTCATTGTTAACACTCTGAAAGATGGAAGGAGAGTGGTTATTTTGATGGAATTACAAGTTTTGAAATCTGCTGAAATAGTTGGAATGAAGATTGGCAATCCATTGCCCTATAACGAAGGACAGGGGCAGCCACAAGCAGCCCCTTCTCCGGCCACAGCAGCCAGTCCATCAGTCAGCAAGCCTCAGCAGCAGAATGGGAGCTCAGGAGCTGGTTCCTCTGTACCCAAGGCTTATGGTGCCTCAAAGACGTTCGGAAAACCTGGAGGGACCGGCCTGTTACACCCTTCTGGGGGGACACAGTCCAAAGTGGTACCCATCGTCAGCCTCACTCCATACCAGTCCAAGTGGACTGTTTGTGCTCGTGTTACCAACAAAAGTCAGATCCGTACCTGGAGCAATTCTCGAGGGGAAGGGAAGCTTTTCTCTCTAGAACTAGTGGATGAAAGTGGTGAAATCAGAGCTACTGCTTTCAATGAGCAAGTGGACAAGTTCTTCCCCCTCATTGAAGTGAACAAGGTGTATTATTTCTCAAAAGGCACCCTGAAGATTGCTAACAAACAGTTCACAGCTGTTAAAAACGACTATGAGATGACCTTCAATAATGAGACTTCTGTCGTGCCCTGTGAAGATGATCATCATTTACCTACAGTTCAGTTTGATTTCACAGGAATAGGTGATCTGGAGAACAAGTCTAAAGATTCACTTATTGACATAATTGGGATCTGCAAGAGCTATGAAGATGCCACTAAAATCACAGTGAAGTCTAGCAACAGAGAAGTTGCTAAGAGAAATATCTATTTGATGGACATGTCAGGGAAAGTGGTGACTGCTACCCTGTGGGGAGAAGATGCTGACAAATTTGATGGTTCTAGACAGCCTGTGATGGCCATAAAAGGAGCCAGAGTTTCTGATTTTGGTGGACGGACCCTTTCTGTACTGTCTTCAAGCACTATTATCATGAATCCTGACATCCCTGAGGCCTATAAGCTTCGTGGATGGTTTGATGCAGAAGGACAAGCCTTAGATGGTGTTTCCATCTCTGATCTAAAGAGTGGGGGGCTAGGAGCAAGCAACACCAACTGGAAAACTTTATACGAGGTGAAATCAGAGAACCTGGGCCAAGGTGACAAGGCAGACTATTTCAGCTCTGTGGCAACAGTGGTGTATCTTCGCAAAGAGAACTGTATGTACCAGGCCTGCCCAACTCAAGATTGCAATAAAAAAGTGATTGACCAGCAGAATGGATTATACCGCTGTGAAAAGTGTGACCGTGAATTTCCCAATTTCAAATACCGCATGATCTTGTCAGCAAATATTGCAGATTTTCAAGAGAATCAGTGGGTGACTTGTTTCCAGGAATCTGCTGAAGCTATCCTTGGACAAAACACTGCTTATCTTGGGGAACTGAAAGAGAAGAACGAGCAGGCATTTGAAGAAGTTTTCCAGAATGCCAACTTTCGATCTTTCATGTTCAAAATCAGGGTCAAACTGGAGACCTACAATGATGAGTCGCGAATTAAGGCCACGGTGATGGACGTGAAGCCTGTGGACTATAGAGACTACGGCAGAAGGCTGATCATGAACATCAGAAGAAATGCAGTGATGTGA

Related Sequences

XP_004857206.1 SequenceType object (4)

Rpa1 PREDICTED: replication protein A 70 kDa DNA-binding subunit [Heterocephalus glaber]

Length: 616 aa      View alignments
>XP_004857206.1
MAGQLSEGAIAAIMQQGDTSIKPILQVISIRPITTGNSPPRYRLLMSDGINTLSSFMLATQMNSLVEEERLASNCICQIQRFIVNTLKDGRRVVILMELQVLKSAEIVGMKIGNPLPYNEGQGQPQAAPSPATAASPSVSKPQQQNGSSGAGSSVPKAYGASKTFGKPGGTGLLHPSGGTQSKVVPIVSLTPYQSKWTVCARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVVPCEDDHHLPTVQFDFTGIGDLENKSKDSLIDIIGICKSYEDATKITVKSSNREVAKRNIYLMDMSGKVVTATLWGEDADKFDGSRQPVMAIKGARVSDFGGRTLSVLSSSTIIMNPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGLGASNTNWKTLYEVKSENLGQGDKADYFSSVATVVYLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAILGQNTAYLGELKEKNEQAFEEVFQNANFRSFMFKIRVKLETYNDESRIKATVMDVKPVDYRDYGRRLIMNIRRNAVM