Sequence details NCBI ID: XM_004856460.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc129
Gene Name coiled-coil domain containing 129
Entrez Gene ID 101715282

Database interlinks

Part of NW_004624783.1 (Scaffold)

For more information consult the page for NW_004624783.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC129 ENSCPOG00000009767 (Guinea pig)

Gene Details

coiled-coil domain containing 129

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008769, Guinea pig)

Protein Percentage 75.81%
CDS Percentage 86.18%
Ka/Ks Ratio 0.67773 (Ka = 0.1397, Ks = 0.2061)

CCDC129 ENSG00000180347 (Human)

Gene Details

coiled-coil domain containing 129

External Links

Gene Match (Ensembl Protein ID: ENSP00000395835, Human)

Protein Percentage 63.74%
CDS Percentage 77.44%
Ka/Ks Ratio 0.69159 (Ka = 0.2519, Ks = 0.3643)

Ccdc129 ENSMUSG00000037973 (Mouse)

Gene Details

coiled-coil domain containing 129

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045332, Mouse)

Protein Percentage 57.65%
CDS Percentage 72.49%
Ka/Ks Ratio 0.55469 (Ka = 0.3043, Ks = 0.5485)

Ccdc129 ENSRNOG00000012165 (Rat)

Gene Details

coiled-coil domain containing 129 (Ccdc129), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046662, Rat)

Protein Percentage 56.83%
CDS Percentage 72.31%
Ka/Ks Ratio 0.58715 (Ka = 0.3122, Ks = 0.5316)

Genome Location

Sequence Coding sequence

Length: 3105 bp    Location: 774781..894928   Strand: +
Raw sequence   
>XM_004856460.1
ATGATGGCGGAGAAGTTGCAAGGATCTGACAACCCTCGAGAAGGCCGGGAGAAGATCAAGAGAAACATCCTGAGGTACACCAAGAAGGCATGGGCTCCTCTGGATGAACAGCTATATGCTGACCCCAAGGAGGAAAGCCAGACTGCCACCATCCCCCTGCTGGAAGATTCCAAGCAGGAAAGTATCCAGCAGTGGCTGGACTCTGGATTTTTTGTCTCTGTAAATGAAAACTTTCAGCAAGTCATCAACCATACTGTTTCTTTGCATGATCAAGGAATGGTTCAAATGACTGTGAAAGACTACATGAGATCTCTCCACCAGTTTTTAGAAACTCCTACCCTATCAAGAGGGACCAGTTTCAATTCTTGCCATGCTACTGCAAGTGTACCACAAAGCATTCCTGAATGGCTGGAATTTTGGGAAAAAGATCCTGTGGAGATTCTCTTGGATCTAGGTTTTGGTGCTGATGAGCCAGACATCTGCACACAAATCCCAGCCAGATTCCTTCACTGTGGCTCAGCAGTCAGAGGAATTGACAGCCATGTTTTCCTTGAAGCTCAGAAGCAGCGGATGCACCTTGAGAACCCTGACTTGTATGGCCATTTCCGACAGCTGGAAGTACTGGACCATGTCACCAGTGCCTTCTCATCTTTGCTGAATGATGTTAACACTCTGCAGAACAAAGCTGAAGAAAACGCTGGAGGACACAGAATGAACACAACCTCAGTGAGTGGGGTCAAAGAGCGTCAAAGAAGAATGAGTAAACTTTTCCAAAGAGCTTTGAGACAGAGCATTGGGAGGAACTACTACACAGAAACATCAGAATCATTCAAGATGAAGGATGGAGTTTTCATCTCTTCTACCAAACCACAGGAATATGGAGCAGAGTTATCAGCAGCCTCAATCAGTCACAACCAAAGTCACCGGTCTCCTTTAGCAGAATGTCATTCTGTCTATTCTGGCTTGATACCTTGCCACCCTCCTCAACCTCCTTTGAGCAAGCAGTGGTGTTGTTCATCTATGCTGGTCACACAAGCTTCTCCTTCCTGTGAGTCGAAAGAGTCAGTGAAAGACGGAACTCAGAAAGAAAACTCGATTCACACCAACAAGCTCAAACACTTGTCTCAACTTGCGAGTAAAACACCAGACTCCTTTGAAATGGAAGAGATCCAGAGCTTTGAGGAGGAGACTGGTAACCCTCTTGACATGACTTCAGGAACTGTAGGCACCAGGATGGACAGAGCCAACAGTTGTCAGTCTGACAGCAGTGGGTTTTTGGAGGAGCCAATGGAACCCCTGCCCCTCCAGTTGCTTTCCTTGACAAGCAGCGAGAGTCATACTGAGAATGGAGATAAAAAGCCATGGGATCAGAGCCACAGCTCACTGTCATCCCAGGACTGTCAGCAAGAGTGTAAAGGGTCTGATTCCAAGAGGATGGCGAGCTCATCCTTTTCAAGCCAAGACTGGAGTGTTTTGGAAGAAAAGGCCTCAGCATCTGTGGTGAAGGAAGAGTCTCAGCTTGAGGCCACACAGGGGCCACCAGAGCTGTTGATTCCTGATATGGCCCTTGCCAAGGCCACCACTTGGGGAGAACACCCATGGGAAGACAGCCACCTGCAGCAGCCCTCACGAACACCTGATGCTGAATATGAGGGTGTTGGAGCCATAGTCATTTCCAAATTTGATGGCCCTCTGGGGTTTATGGTGACCCACACCACAGAAGAGGAGGAAAGGTCTCTGAGGCCTGAGGGGACTAGGGAAGTCCTCATGCAAAAGCACCCCTGTGAGTCTCAAAGGCCATCTGGAATTGATCAGAGTCAAGACAGGTCCCCTCGAGAGGACTGTGATGACCCAGGAGCAGAGGAGAGCCACAAACTCTGTCCTGACACCAGTAACATATTACTGTCAGAAGAGAGACCACCACAGCATATTCTCAGGCACAGAGAAGTCACACCTTATAGAGTTGACCTTGTTCAAACACCTGACAAGTCCACTTCTGACCTCAATAAACTGCCTGGAGATGCTCCCAGGGACTCAAGTGCTGGCTGCTCCAGGTCTGTGACAACCCAGATGTCCTCCAAACTGATGTCAGCTGCTCAAAGTGCTGTGGCCTTGGGCATGGATTATAGAAGAACAGATATAGAAGGTACTCTGTGTGACCCTATGACTGTAACAGAACTGAGACAGGAGACAGAAACAAAACAGGTCAGTGATGTTTCTGTTCAGACTTACACATATGAATGTGAACCCTGCCATTGCTGTATATCTCCAGGTAATGAAGCCTTCACTCACAGACCCAAGCTGCTCACCAAATCAGTCTCTCTGGACACAAGTTTCCCTAGTGTTGACCCAATGGGCACTCGCCCCACCACACCCACCCACTGCTGTATCTGCTGTCATCACCATTTCCACAGCCATGAGGAGAGGCCATGCACCAGCCCTGCACCCTGTGTGGGCAGACATTGGCTGTGTCCACATGCAAAACATCTGGAAGCCAAGTTCACAAAGACCTTGAGAGTCCTTCAGGACACATTCGTGAGGGAGCTGTGTTCTTGCACCGTCCATGACTTGGAAGCCATGAAGATGATATGCCAGAGTTTCCGGGAGCATTTAGAGGAAATTGAACAGCACCTTCTGGGGCAGCAAACACTCTTTTGCAGGGACATGTCAGAGGAGGAAAGGGAGGAGGCTGAGCCACTTCAAACTTTACGTGAGGCCCTGAGGCAGCAGGTGGCAGAGCTGGAGTTTCAATTAGGACACCGGGCTCAGCAACTCAGAGAAGGGATTCTCTTGCAGCTGGAGCTTCCCACAGGTGAGACATGTGAACACTGTACAAGTCTGCAACAATACAACTGGCCAGAAGAAAACCATGGCCAGACTTCAGATGCTGGCACCCAGCCCACCATCGCCCCTGAACCTGCCTTTCCTCCCAGTGGGGGCCAGCAGATTCCCTGCTCAGGCATGATACATATGGCTGTCCTTGCTGCACCGGACTTAGAGACCAGCGCCAAGATGTCTCCCCTACCACCAGCTTGGGCAGAGTCAGGTCCAGCCTGTACCTCACATTGTTCTGCTGGAGAAAAGGATATAAATGTCCTCCTCTAG

Related Sequences

XP_004856517.1 Protein

Ccdc129 PREDICTED: coiled-coil domain-containing protein 129 [Heterocephalus glaber]

Length: 1034 aa      View alignments
>XP_004856517.1
MMAEKLQGSDNPREGREKIKRNILRYTKKAWAPLDEQLYADPKEESQTATIPLLEDSKQESIQQWLDSGFFVSVNENFQQVINHTVSLHDQGMVQMTVKDYMRSLHQFLETPTLSRGTSFNSCHATASVPQSIPEWLEFWEKDPVEILLDLGFGADEPDICTQIPARFLHCGSAVRGIDSHVFLEAQKQRMHLENPDLYGHFRQLEVLDHVTSAFSSLLNDVNTLQNKAEENAGGHRMNTTSVSGVKERQRRMSKLFQRALRQSIGRNYYTETSESFKMKDGVFISSTKPQEYGAELSAASISHNQSHRSPLAECHSVYSGLIPCHPPQPPLSKQWCCSSMLVTQASPSCESKESVKDGTQKENSIHTNKLKHLSQLASKTPDSFEMEEIQSFEEETGNPLDMTSGTVGTRMDRANSCQSDSSGFLEEPMEPLPLQLLSLTSSESHTENGDKKPWDQSHSSLSSQDCQQECKGSDSKRMASSSFSSQDWSVLEEKASASVVKEESQLEATQGPPELLIPDMALAKATTWGEHPWEDSHLQQPSRTPDAEYEGVGAIVISKFDGPLGFMVTHTTEEEERSLRPEGTREVLMQKHPCESQRPSGIDQSQDRSPREDCDDPGAEESHKLCPDTSNILLSEERPPQHILRHREVTPYRVDLVQTPDKSTSDLNKLPGDAPRDSSAGCSRSVTTQMSSKLMSAAQSAVALGMDYRRTDIEGTLCDPMTVTELRQETETKQVSDVSVQTYTYECEPCHCCISPGNEAFTHRPKLLTKSVSLDTSFPSVDPMGTRPTTPTHCCICCHHHFHSHEERPCTSPAPCVGRHWLCPHAKHLEAKFTKTLRVLQDTFVRELCSCTVHDLEAMKMICQSFREHLEEIEQHLLGQQTLFCRDMSEEEREEAEPLQTLREALRQQVAELEFQLGHRAQQLREGILLQLELPTGETCEHCTSLQQYNWPEENHGQTSDAGTQPTIAPEPAFPPSGGQQIPCSGMIHMAVLAAPDLETSAKMSPLPPAWAESGPACTSHCSAGEKDINVLL