Sequence details NCBI ID: XM_004856363.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Smo
Gene Name smoothened, frizzled family receptor
Entrez Gene ID 101710259

Database interlinks

Part of NW_004624783.1 (Scaffold)

For more information consult the page for NW_004624783.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMO ENSCPOG00000013127 (Guinea pig)

Gene Details

smoothened, frizzled family receptor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011817, Guinea pig)

Protein Percentage 97.47%
CDS Percentage 93.32%
Ka/Ks Ratio 0.03912 (Ka = 0.0119, Ks = 0.3054)

SMO ENSG00000128602 (Human)

Gene Details

smoothened, frizzled family receptor

External Links

Gene Match (Ensembl Protein ID: ENSP00000249373, Human)

Protein Percentage 95.42%
CDS Percentage 91.39%
Ka/Ks Ratio 0.04808 (Ka = 0.0203, Ks = 0.4227)

Smo ENSMUSG00000001761 (Mouse)

Gene Details

smoothened homolog (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001812, Mouse)

Protein Percentage 93.91%
CDS Percentage 89.76%
Ka/Ks Ratio 0.06362 (Ka = 0.0298, Ks = 0.4683)

Smo ENSRNOG00000008332 (Rat)

Gene Details

smoothened, frizzled family receptor (Smo), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011356, Rat)

Protein Percentage 94.29%
CDS Percentage 89.59%
Ka/Ks Ratio 0.05697 (Ka = 0.0275, Ks = 0.4831)

Genome Location

Sequence Coding sequence

Length: 2373 bp    Location: 7039287..7012392   Strand: -
Raw sequence   
>XM_004856363.1
ATGGCCGCTGCCCGACCTGCACGGGGGCCCGAGCTGCCTTTCCTGGGGCTGCTGCTGCTGGTGCTGGGCGTCCCGGGCCGGGGGGCGGCCTTGAGCGGGAACGCTACAGGGCCTGGGCCTCGGGGCGCCGGCGGGAGCGCCAGGAGGAGCGCGGCGGGGACCGGCCCTCCGCCGCTGCTGAGCCACTGTGGCCGGGCCGCCCCCTGCGAGCCGCTGCGCTACAACGTGTGCCTGGGCTCGGCGCTGCCCTACGGCGCCACCTCCACGCTGCTGGCTGGAGACTCCGACTCCCAGGAAGAAGCTCATGGCAAGCTCGTGCTCTGGTCCGGCCTCCGGAATGCCCCCCGCTGCTGGGCAGTGATCCAGCCCCTGCTGTGTGCTGTATACATGCCCAAGTGCGAAAATGACCGGGTGGAGCTCCCCAGCCGAACCCTCTGCCAGGCCACACGAGGCCCCTGTGCCATTGTGGAGCGGGAGCGGGGCTGGCCTGACTTCCTGCGCTGTACCCCCGACCACTTCCCTGAAGGCTGCCCGAATGAGGTGCAGAACATCAAGTTCAACAGCTCAGGGCAGTGTGAAGCGCCCTTGGTGCGGACCGACAACCCCAAGAGCTGGTATGAGGATGTGGAGGGCTGCGGGATCCAGTGCCAGAACCCGCTGTTCACAGAGGCAGAGCACCAGGACATGCACAGCTACATTGCCACCTTTGGTGCCGTCACGGGCCTCTGCACGCTCTTCACCCTGGCCACCTTCGTGGCTGATTGGCGGAACTCTAATCGCTACCCCGCAGTTATTCTCTTCTACGTCAATGCGTGTTTCTTCGTGGGCAGCATTGGCTGGCTGGCCCAATTCATGGATGGTGCCCGCCGAGAGATCGTGTGCCGAGCCGATGGCACCATGAGGCTTGGGGAGCCCACCTCCAATGAGACCCTGTCCTGTGTCATCATCTTTGTCATCGTATACTATGCCCTGATGGCTGGCGTGGTCTGGTTTGTGGTCCTCACCTATGCCTGGCATACCTCCTTCAAAGCCCTGGGCACCACCTACCAGCCTCTCTCAGGCAAGACCTCCTACTTTCACCTGCTCACGTGGTCGCTCCCCTTCGTCCTCACTGTGGCAATCCTCGCCGTGGCCCAGGTGGATGGGGACTCCGTGAGTGGCATCTGTTTTGTGGGCTACAAGAACTACCGATACCGTGCTGGCTTTGTACTGGCCCCAATTGGCCTGGTGCTTATCGTGGGGGGCTACTTCCTCATCCAAGGAGTCATGACTCTCTTCTCCATCAAGAGCAACCACCCGGGGCTGCTGAGCGAGAAGGCTGCCAGCAAAATCAATGAGACCATGCTGCGCCTGGGCATTTTTGGCTTCTTGGCCTTTGGCTTTGTGCTGATTACCTTCAGCTGCCATTTTTATGACTTCTTCAACCAGGCTGAGTGGGAGCGCAGTTTCCGGGACTACGTACTATGCCAGGCCAATGTGACCATTGGGCTGCCCACCAAGAAGCCCATCCCTGACTGTGAGATCAAGAATCGCCCAAGCCTTCTAGTAGAGAAGATCAACCTGTTTGCCATGTTTGGAACTGGCATTGCCATGAGCACCTGGGTTTGGACTAAAGCCACTCTGCTCATCTGGAGGCGCACCTGGTGCAGGCTGACTGGGCAGAGTGATGATGAGCCCAAAAGAATCAAGAAGAGCAAGATGATTGCCAAGGCCTTCTCCAAGCGGCGTGAGCTACTACAGAACCCAGGCCAGGAGCTCTCCTTTAGCATGCACACGGTCTCCCATGATGGGCCTGTGGCGGGTTTGGCTTTTGACCTCAATGAGCCCTCTGCCGATGTCTCCTCTGCCTGGGCCCAGCATGTCACCAAGATGGTGGCTCGGAGAGGAGCCATATTGCCCCAGGATGTGTCTGTCACCCCAGTGGCAACTCCAGTGCCAGCAGAGGAACAAGCCAACCTGTGGCTGGTTGAGGCAGAGATCTCCCCAGAGCTAGAGAAGCGCCTGGGCCGGAAGAAGAAGCGGAGAAAGAGGAAAAAGGAAGTGTGCCCCCTGGGGGCAGCCCCTGATCTTCACCATGCTGCCCCCGCCCTTGCTCCTGCCACCAGTGCAGTTCCTCGGCTGCCTCAGCTGCCCCAGCAGAAGTGCCTAGTGGCTGCGGGTGCCTGGGGAGCTGGAGAACCCTGCTGCCAGGGAGCCTGGACCCTGGTCTCTAACCCCTTCTGCCCAGAGCCCAGTCCCCATCAGGACCCATTTCTCTCCAGCGCCCCAGCCCCCATGGCCTGGGCTCATGGACGCCGCCAAGGACTGGGGCCCATTCACTCTCGCACCAACCTGATGGAAGCAGAGCTCATGGACGCAGACTCAGACTTCTGA

Related Sequences

XP_004856420.1 Protein

Smo PREDICTED: smoothened homolog [Heterocephalus glaber]

Length: 790 aa      View alignments
>XP_004856420.1
MAAARPARGPELPFLGLLLLVLGVPGRGAALSGNATGPGPRGAGGSARRSAAGTGPPPLLSHCGRAAPCEPLRYNVCLGSALPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWAVIQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPEGCPNEVQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIATFGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIQGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQANVTIGLPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSHDGPVAGLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPAEEQANLWLVEAEISPELEKRLGRKKKRRKRKKEVCPLGAAPDLHHAAPALAPATSAVPRLPQLPQQKCLVAAGAWGAGEPCCQGAWTLVSNPFCPEPSPHQDPFLSSAPAPMAWAHGRRQGLGPIHSRTNLMEAELMDADSDF